genewise output
Score 297.40 bits over entire alignment
Scores as bits over a synchronous coding model

Warning: The bits scores is not probablistically correct for single seqs
See WWW help for more info

gi|262106269|gb  106 ETLVPILAGNTLLPGAETAAQCYCGHQFGFFSGQLGDGAALYLGEVV-A 
                     + +    +GN  LPG   AA CY G QFG F+GQLGDG A  LGE+    
                     DNIAQYFSGNVTLPGMVPAAHCYAGTQFGNFAGQLGDGRATNLGEITNK 
supercont1.1171 9523 gaagcttagagaccgagcggcttggactgatggctgggcgaatggaaaa 
                     aatcaatggatctcgttcccagacgcatgatcgatgaggccatgatcaa 
                     ctacgcctctgtgacggtcacccctagccctcagaatgagctatgcgca 


gi|262106269|gb  154 VDERWELQLKGSGLTPYSRTA                          GR 
                       ++WELQLKG+GLTPYSRTA                          GR 
                     RGQKWELQLKGAGLTPYSRTA          D:D[gac]        GR 
supercont1.1171 9670 cgcatgcctagggtacttaagGGTGCGTT  Intron 1   CAGACgc 
                     ggaagatatagcgtccacgcc <1-----[9734 :10160]-1>  gg 
                     gcgagggggattggcgtcgaa                          cg 


gi|262106269|gb  178 KVLRSTLREFLCSENMHALGVPTTRAGSVVTSKETQVLRDIFYNGDAKM 
                      V RS++RE++CSE+MHALG+ TTRA S+VTS  T V+RD +Y+G     
                     AVFRSSIREYICSEHMHALGIATTRAASLVTS-DTLVVRDPMYDGHTIE 
supercont1.117110169 ggtcttacgtatagcacgcgagaacggtcgat gacggcgcatggcaag 
                     cttgcctgaatggaatactgtcccgcccttcc actttgactaagacta 
                     ttcggctcgccccatgcagttacacaccacca ctggaaccgtcaccaa 


gi|262106269|gb  227 EPTAVVTRIAKSFLRFGSFEIFKDEDKLTGLA                  
                     E + VV R+A SFLRFGS+E+F  ED+ TG A                  
                     EQSTVVLRLAPSFLRFGSWEVFLGEDERTGRA                  
supercont1.117110313 gctaggtccgcttcctgttggtcggggaagcg                  
                     aacctttgtcccttgtgcgatttgaaagcggc                  
                     agcaagagacagccctcggggtgcgcagtatg                  


gi|262106269|gb  259                           PSAHLENKEEMMREMLDFTIRQY 
                                               PSA  E+   + ++MLD  +  + 
                               G:G[ggg]        PSAGAEH-FPLAKQMLDHVVSTH 
supercont1.117110409 GGTATGTC  Intron 2   CAGGGctggggc tccgacacgcggtac 
                      <1-----[10410:10795]-1>  cccgcaa tctcaattaattcca 
                                               ggttggc ttgcgggaccagctc 


gi|262106269|gb  283 YSEISGAR-----KYEKFFQEVVRRTAMLVAKWQ                
                     Y +I  A       Y  FFQE+V RTA   AKWQ                
                     YPDIWAAHDNDTDRYIAFFQELVDRTAETCAKWQ                
supercont1.117110864 tcgatggcgagagatagttcgtggcaggatgatc                
                     acatgccaaaacagatcttaattagccacgcaga                
                     ctccgtctcccacactcccgagctcgagcttggg                


gi|262106269|gb  312                        SIGFCHGVLNTDNMSIVGDTLDYGPF 
                                             +GF HGVLNTDNMSI+G T+DYGP+ 
                                            GVGFVHGVLNTDNMSILGLTIDYGPY 
supercont1.117110966 GTGTGGC  Intron 3   TAGgggtgcggcaagaaaacgcaagtgct 
                     <0-----[10966:11481]-0>gtgttagttacaatgttgtctaagca 
                                            tagtgctgccatcgtcgggctctagt 


gi|262106269|gb  338 GFMEHFDPKHICNTSDDRGRYRYEAQPEVCK                   
                     GFM +FD   + N SD  GRYRY+ QP +CK                   
                     GFMGYFDSDMVPNHSDTTGRYRYQNQPGICK                   
supercont1.117111560 gtagttgtgagcactgaagctctcaccgata                   
                     gttgatacattcaacaccggagaaaacgtga                   
                     ccgacttgtgcctcaccaagtacgcggtcta                   


gi|262106269|gb  369                           NCGVLADQLGL--VTERAGLEPI 
                                               N   LA  L    V   + L P+ 
                                W:W[tgg]       NLTRLAQALDTSGVICMSNLSPV 
supercont1.117111653 TGGTAAGGG  Intron 4   CAGGataccgcgtgatggatatactcg 
                       <2-----[11655:11888]-2> atcgtcactaccgttgtcatcct 
                                               cggaggggaccatctcgtcgaag 


gi|262106269|gb  391 LESFDAVYEAEYMRLMREK                       LGL-SDE 
                     +E++DAV    Y   M  K                       LGL     
                     IENYDAVLRRHYSATMLAK                       LGLIRSV 
supercont1.117111959 agatgggtccctagaacgaGTAAGTC  Intron 5   CAGcgcactg 
                     taaaacttggaagccttca<0-----[12016:12395]-0>tgttgct 
                     agccccgacatctacgaag                       gtatgta 


gi|262106269|gb  416 EKEDKMLVDTLFDVLAFTGADFTCTFRYLSELDVFE              
                     E+ D+ LV  LF  +  TG D+T  FR L+++ V E              
                     EESDRELVSELFATMNDTGCDMTALFRELADVPVTE              
supercont1.117112417 ggtgcgcgtgctgaaagagtgaagctcgtgggcgag              
                     aacagattcattcctaacggatccttgatcatctca              
                     gacctgggtggtccgtcggtcgtggctgagcgtgtg              


//
Making a D in phase 1 intron
Making a G in phase 1 intron
Making a W in phase 2 intron
>supercont1.1171:subseq(0,20000).pep
DNIAQYFSGNVTLPGMVPAAHCYAGTQFGNFAGQLGDGRATNLGEITNKRGQKWELQLKG
AGLTPYSRTADGRAVFRSSIREYICSEHMHALGIATTRAASLVTSDTLVVRDPMYDGHTI
EEQSTVVLRLAPSFLRFGSWEVFLGEDERTGRAGPSAGAEHFPLAKQMLDHVVSTHYPDI
WAAHDNDTDRYIAFFQELVDRTAETCAKWQGVGFVHGVLNTDNMSILGLTIDYGPYGFMG
YFDSDMVPNHSDTTGRYRYQNQPGICKWNLTRLAQALDTSGVICMSNLSPVIENYDAVLR
RHYSATMLAKLGLIRSVEESDRELVSELFATMNDTGCDMTALFRELADVPVTE
//
>supercont1.1171:subseq(0,20000).[9523:12524].sp
GACAATATAGCCCAGTACTTCAGTGGCAATGTGACTCTGCCAGGCATGGTGCCTGCCGCA
CACTGCTACGCCGGTACACAGTTCGGCAACTTTGCCGGACAGTTAGGAGATGGGCGAGCG
ACCAATTTAGGTGAGATCACGAACAAACGGGGCCAGAAATGGGAGCTGCAGTTGAAAGGT
GCTGGGTTGACCCCGTATTCCAGGACAGCAGACGGCCGGGCTGTTTTCCGGTCGTCCATT
CGCGAGTACATCTGCAGCGAACATATGCACGCACTGGGTATTGCAACCACACGCGCAGCC
TCCCTAGTCACCTCAGACACTCTGGTGGTACGAGACCCCATGTATGACGGACACACCATA
GAAGAACAGTCCACAGTAGTGTTACGGCTAGCCCCATCGTTCCTCCGCTTTGGCTCGTGG
GAGGTGTTTCTGGGCGAGGACGAAAGGACTGGACGTGCGGGGCCGTCGGCTGGTGCGGAG
CACTTTCCTCTGGCCAAGCAGATGCTAGACCACGTAGTGTCCACTCACTACCCTGACATC
TGGGCTGCCCATGACAACGACACAGACAGATACATTGCCTTCTTCCAGGAATTGGTCGAT
CGCACGGCAGAGACCTGTGCTAAGTGGCAGGGTGTAGGGTTTGTGCACGGTGTGCTCAAC
ACAGATAACATGAGTATCCTGGGGCTGACCATTGACTATGGACCGTATGGCTTCATGGGA
TACTTTGATTCGGATATGGTCCCCAATCACTCAGACACCACAGGACGGTATCGATACCAG
AACCAGCCGGGTATCTGTAAATGGAACTTGACGCGACTGGCGCAGGCGTTAGACACCTCA
GGTGTCATTTGCATGTCTAACCTGTCACCAGTGATAGAGAACTACGACGCCGTGTTACGC
CGACATTACAGTGCAACCATGCTAGCAAAGCTGGGTCTAATTCGGTCTGTAGAGGAATCC
GACCGTGAGCTGGTGTCTGAGCTGTTTGCCACCATGAATGACACGGGGTGTGACATGACT
GCGCTGTTCCGTGAGTTAGCGGACGTGCCTGTGACTGAG
//
supercont1.1171:subseq(0,20000)	GeneWise	match	9523	12524	302.39	+	.	supercont1.1171:subseq(0,20000)-genewise-prediction-1
supercont1.1171:subseq(0,20000)	GeneWise	cds	9523	9733	0.00	+	0	supercont1.1171:subseq(0,20000)-genewise-prediction-1
supercont1.1171:subseq(0,20000)	GeneWise	intron	9734	10160	0.00	+	.	supercont1.1171:subseq(0,20000)-genewise-prediction-1
supercont1.1171:subseq(0,20000)	GeneWise	cds	10161	10409	0.00	+	2	supercont1.1171:subseq(0,20000)-genewise-prediction-1
supercont1.1171:subseq(0,20000)	GeneWise	intron	10410	10795	0.00	+	.	supercont1.1171:subseq(0,20000)-genewise-prediction-1
supercont1.1171:subseq(0,20000)	GeneWise	cds	10796	10965	0.00	+	2	supercont1.1171:subseq(0,20000)-genewise-prediction-1
supercont1.1171:subseq(0,20000)	GeneWise	intron	10966	11481	0.00	+	.	supercont1.1171:subseq(0,20000)-genewise-prediction-1
supercont1.1171:subseq(0,20000)	GeneWise	cds	11482	11654	0.00	+	0	supercont1.1171:subseq(0,20000)-genewise-prediction-1
supercont1.1171:subseq(0,20000)	GeneWise	intron	11655	11888	0.00	+	.	supercont1.1171:subseq(0,20000)-genewise-prediction-1
supercont1.1171:subseq(0,20000)	GeneWise	cds	11889	12015	0.00	+	1	supercont1.1171:subseq(0,20000)-genewise-prediction-1
supercont1.1171:subseq(0,20000)	GeneWise	intron	12016	12395	0.00	+	.	supercont1.1171:subseq(0,20000)-genewise-prediction-1
supercont1.1171:subseq(0,20000)	GeneWise	cds	12396	12524	0.00	+	0	supercont1.1171:subseq(0,20000)-genewise-prediction-1
//