genewise output
Score 297.40 bits over entire alignment
Scores as bits over a synchronous coding model

Warning: The bits scores is not probablistically correct for single seqs
See WWW help for more info

gi|262106269|gb  106 ETLVPILAGNTLLPGAETAAQCYCGHQFGFFSGQLGDGAALYLGEVV-A 
                     + +    +GN  LPG   AA CY G QFG F+GQLGDG A  LGE+    
                     DNIAQYFSGNVTLPGMVPAAHCYAGTQFGNFAGQLGDGRATNLGEITNK 
supercont1.1171 9378 gaagcttagagaccgagcggcttggactgatggctgggcgaatggaaaa 
                     aatcaatggatctcgttcccagacgcatgatcgatgaggccatgatcaa 
                     ctacgcctctgtgacggtcacccctagccctcagaatgagctatgcgca 


gi|262106269|gb  154 VDERWELQLKGSGLTPYSRTA                          GR 
                       ++WELQLKG+GLTPYSRTA                          GR 
                     RGQKWELQLKGAGLTPYSRTA          D:D[gac]        GR 
supercont1.1171 9525 cgcatgcctagggtacttaagGGTGCGTT  Intron 1   CAGACgc 
                     ggaagatatagcgtccacgcc <1-----[9589 :10015]-1>  gg 
                     gcgagggggattggcgtcgaa                          cg 


gi|262106269|gb  178 KVLRSTLREFLCSENMHALGVPTTRAGSVVTSKETQVLRDIFYNGDAKM 
                      V RS++RE++CSE+MHALG+ TTRA S+VTS  T V+RD +Y+G     
                     AVFRSSIREYICSEHMHALGIATTRAASLVTS-DTLVVRDPMYDGHTIE 
supercont1.117110024 ggtcttacgtatagcacgcgagaacggtcgat gacggcgcatggcaag 
                     cttgcctgaatggaatactgtcccgcccttcc actttgactaagacta 
                     ttcggctcgccccatgcagttacacaccacca ctggaaccgtcaccaa 


gi|262106269|gb  227 EPTAVVTRIAKSFLRFGSFEIFKDEDKLTGLA                  
                     E + VV R+A SFLRFGS+E+F  ED+ TG A                  
                     EQSTVVLRLAPSFLRFGSWEVFLGEDERTGRA                  
supercont1.117110168 gctaggtccgcttcctgttggtcggggaagcg                  
                     aacctttgtcccttgtgcgatttgaaagcggc                  
                     agcaagagacagccctcggggtgcgcagtatg                  


gi|262106269|gb  259                           PSAHLENKEEMMREMLDFTIRQY 
                                               PSA  E+   + ++MLD  +  + 
                               G:G[ggg]        PSAGAEH-FPLAKQMLDHVVSTH 
supercont1.117110264 GGTATGTC  Intron 2   CAGGGctggggc tccgacacgcggtac 
                      <1-----[10265:10650]-1>  cccgcaa tctcaattaattcca 
                                               ggttggc ttgcgggaccagctc 


gi|262106269|gb  283 YSEISGAR-----KYEKFFQEVVRRTAMLVAKWQ                
                     Y +I  A       Y  FFQE+V RTA   AKWQ                
                     YPDIWAAHDNDTDRYIAFFQELVDRTAETCAKWQ                
supercont1.117110719 tcgatggcgagagatagttcgtggcaggatgatc                
                     acatgccaaaacagatcttaattagccacgcaga                
                     ctccgtctcccacactcccgagctcgagcttggg                


gi|262106269|gb  312                        SIGFCHGVLNTDNMSIVGDTLDYGPF 
                                             +GF HGVLNTDNMSI+G T+DYGP+ 
                                            GVGFVHGVLNTDNMSILGLTIDYGPY 
supercont1.117110821 GTGTGGC  Intron 3   TAGgggtgcggcaagaaaacgcaagtgct 
                     <0-----[10821:11336]-0>gtgttagttacaatgttgtctaagca 
                                            tagtgctgccatcgtcgggctctagt 


gi|262106269|gb  338 GFMEHFDPKHICNTSDDRGRYRYEAQPEVCK                   
                     GFM +FD   + N SD  GRYRY+ QP +CK                   
                     GFMGYFDSDMVPNHSDTTGRYRYQNQPGICK                   
supercont1.117111415 gtagttgtgagcactgaagctctcaccgata                   
                     gttgatacattcaacaccggagaaaacgtga                   
                     ccgacttgtgcctcaccaagtacgcggtcta                   


gi|262106269|gb  369                           NCGVLADQLGL--VTERAGLEPI 
                                               N   LA  L    V   + L P+ 
                                W:W[tgg]       NLTRLAQALDTSGVICMSNLSPV 
supercont1.117111508 TGGTAAGGG  Intron 4   CAGGataccgcgtgatggatatactcg 
                       <2-----[11510:11743]-2> atcgtcactaccgttgtcatcct 
                                               cggaggggaccatctcgtcgaag 


gi|262106269|gb  391 LESFDAVYEAEYMRLMREK                       LGL-SDE 
                     +E++DAV    Y   M  K                       LGL     
                     IENYDAVLRRHYSATMLAK                       LGLIRSV 
supercont1.117111814 agatgggtccctagaacgaGTAAGTC  Intron 5   CAGcgcactg 
                     taaaacttggaagccttca<0-----[11871:12250]-0>tgttgct 
                     agccccgacatctacgaag                       gtatgta 


gi|262106269|gb  416 EKEDKMLVDTLFDVLAFTGADFTCTFRYLSELDVFE              
                     E+ D+ LV  LF  +  TG D+T  FR L+++ V E              
                     EESDRELVSELFATMNDTGCDMTALFRELADVPVTE              
supercont1.117112272 ggtgcgcgtgctgaaagagtgaagctcgtgggcgag              
                     aacagattcattcctaacggatccttgatcatctca              
                     gacctgggtggtccgtcggtcgtggctgagcgtgtg              


//
Making a D in phase 1 intron
Making a G in phase 1 intron
Making a W in phase 2 intron
>supercont1.1171:subseq(145,20000).pep
DNIAQYFSGNVTLPGMVPAAHCYAGTQFGNFAGQLGDGRATNLGEITNKRGQKWELQLKG
AGLTPYSRTADGRAVFRSSIREYICSEHMHALGIATTRAASLVTSDTLVVRDPMYDGHTI
EEQSTVVLRLAPSFLRFGSWEVFLGEDERTGRAGPSAGAEHFPLAKQMLDHVVSTHYPDI
WAAHDNDTDRYIAFFQELVDRTAETCAKWQGVGFVHGVLNTDNMSILGLTIDYGPYGFMG
YFDSDMVPNHSDTTGRYRYQNQPGICKWNLTRLAQALDTSGVICMSNLSPVIENYDAVLR
RHYSATMLAKLGLIRSVEESDRELVSELFATMNDTGCDMTALFRELADVPVTE
//
>supercont1.1171:subseq(145,20000).[9378:12379].sp
GACAATATAGCCCAGTACTTCAGTGGCAATGTGACTCTGCCAGGCATGGTGCCTGCCGCA
CACTGCTACGCCGGTACACAGTTCGGCAACTTTGCCGGACAGTTAGGAGATGGGCGAGCG
ACCAATTTAGGTGAGATCACGAACAAACGGGGCCAGAAATGGGAGCTGCAGTTGAAAGGT
GCTGGGTTGACCCCGTATTCCAGGACAGCAGACGGCCGGGCTGTTTTCCGGTCGTCCATT
CGCGAGTACATCTGCAGCGAACATATGCACGCACTGGGTATTGCAACCACACGCGCAGCC
TCCCTAGTCACCTCAGACACTCTGGTGGTACGAGACCCCATGTATGACGGACACACCATA
GAAGAACAGTCCACAGTAGTGTTACGGCTAGCCCCATCGTTCCTCCGCTTTGGCTCGTGG
GAGGTGTTTCTGGGCGAGGACGAAAGGACTGGACGTGCGGGGCCGTCGGCTGGTGCGGAG
CACTTTCCTCTGGCCAAGCAGATGCTAGACCACGTAGTGTCCACTCACTACCCTGACATC
TGGGCTGCCCATGACAACGACACAGACAGATACATTGCCTTCTTCCAGGAATTGGTCGAT
CGCACGGCAGAGACCTGTGCTAAGTGGCAGGGTGTAGGGTTTGTGCACGGTGTGCTCAAC
ACAGATAACATGAGTATCCTGGGGCTGACCATTGACTATGGACCGTATGGCTTCATGGGA
TACTTTGATTCGGATATGGTCCCCAATCACTCAGACACCACAGGACGGTATCGATACCAG
AACCAGCCGGGTATCTGTAAATGGAACTTGACGCGACTGGCGCAGGCGTTAGACACCTCA
GGTGTCATTTGCATGTCTAACCTGTCACCAGTGATAGAGAACTACGACGCCGTGTTACGC
CGACATTACAGTGCAACCATGCTAGCAAAGCTGGGTCTAATTCGGTCTGTAGAGGAATCC
GACCGTGAGCTGGTGTCTGAGCTGTTTGCCACCATGAATGACACGGGGTGTGACATGACT
GCGCTGTTCCGTGAGTTAGCGGACGTGCCTGTGACTGAG
//
supercont1.1171:subseq(145,20000)	GeneWise	match	9378	12379	302.39	+	.	supercont1.1171:subseq(145,20000)-genewise-prediction-1
supercont1.1171:subseq(145,20000)	GeneWise	cds	9378	9588	0.00	+	0	supercont1.1171:subseq(145,20000)-genewise-prediction-1
supercont1.1171:subseq(145,20000)	GeneWise	intron	9589	10015	0.00	+	.	supercont1.1171:subseq(145,20000)-genewise-prediction-1
supercont1.1171:subseq(145,20000)	GeneWise	cds	10016	10264	0.00	+	2	supercont1.1171:subseq(145,20000)-genewise-prediction-1
supercont1.1171:subseq(145,20000)	GeneWise	intron	10265	10650	0.00	+	.	supercont1.1171:subseq(145,20000)-genewise-prediction-1
supercont1.1171:subseq(145,20000)	GeneWise	cds	10651	10820	0.00	+	2	supercont1.1171:subseq(145,20000)-genewise-prediction-1
supercont1.1171:subseq(145,20000)	GeneWise	intron	10821	11336	0.00	+	.	supercont1.1171:subseq(145,20000)-genewise-prediction-1
supercont1.1171:subseq(145,20000)	GeneWise	cds	11337	11509	0.00	+	0	supercont1.1171:subseq(145,20000)-genewise-prediction-1
supercont1.1171:subseq(145,20000)	GeneWise	intron	11510	11743	0.00	+	.	supercont1.1171:subseq(145,20000)-genewise-prediction-1
supercont1.1171:subseq(145,20000)	GeneWise	cds	11744	11870	0.00	+	1	supercont1.1171:subseq(145,20000)-genewise-prediction-1
supercont1.1171:subseq(145,20000)	GeneWise	intron	11871	12250	0.00	+	.	supercont1.1171:subseq(145,20000)-genewise-prediction-1
supercont1.1171:subseq(145,20000)	GeneWise	cds	12251	12379	0.00	+	0	supercont1.1171:subseq(145,20000)-genewise-prediction-1
//