
genewise output
Score 43.73 bits over entire alignment
Scores as bits over a synchronous coding model

Warning: The bits scores is not probablistically correct for single seqs
See WWW help for more info

SPP00000116_1.0   63 SQRYPDIRIEGENYLPQPIYRHIASFLSV-FKLVLIGLIIVGKDPFAFF 
                     S++ P I++ G  Y        I  +LS  F L+LI  ++    PF    
                     SRKKPFIKFVGVVYSVGTTREMIGGILSTGFVLLLIVSVLT---PF-LR 
T.congo.pschr.510102 acaactaatggggttggaacgaaggacaagtgctcagagca   ct ta 
                     ggaacttattgttactgccgattggttgcgtttttttgttc   ct tg 
                     tgggattattatgctcggacggcttttcctcgcgcccttcc   at gg 


SPP00000116_1.0  111 GMQAPSIWQWGQENKVYACMMVFFLSNMIENQCMSTGAFEITLNDVPVW 
                     G+  P I QW ++++ Y  + V F+ N+I    + +GAFE+ L+ V V+ 
                     GVIPPHIAQWIEQHR-YTILGVGFVMNIISANLLQSGAFEVYLDGVLVY 
T.congo.pschr.510237 ggacccagctagccc taatgggtgaaaatgatcctggtggtcgggcgt 
                     gttccatcagtaaag acttgtgtttattccattacgctatatagttta 
                     agagcctcggcggcc cgagaggctgcctagtgtgctctgtccctcccc 


SPP00000116_1.0  160 SKLESGHLPSMQQLVQ                                  
                     SKLE+  +PS   L +                                  
                     SKLETNTVPSAGTLAK                                  
T.congo.pschr.510381 tacgaaagctggatga                                  
                     catacactcccgctca                                  
                     gaggtccgcccgaggg                                  


//
>T.congo.pschr.5:subseq(155850,175850).pep
SRKKPFIKFVGVVYSVGTTREMIGGILSTGFVLLLIVSVLTPFLRGVIPPHIAQWIEQHR
YTILGVGFVMNIISANLLQSGAFEVYLDGVLVYSKLETNTVPSAGTLAK
//
T.congo.pschr.5:subseq(155850,175850)	GeneWise	match	10102	10428	45.73	+	.	T.congo.pschr.5:subseq(155850,175850)-genewise-prediction-1
T.congo.pschr.5:subseq(155850,175850)	GeneWise	cds	10102	10428	0.00	+	0	T.congo.pschr.5:subseq(155850,175850)-genewise-prediction-1
//

genewise output
Score 18.78 bits over entire alignment
Scores as bits over a synchronous coding model

Warning: The bits scores is not probablistically correct for single seqs
See WWW help for more info

SPP00000116_1.0   97 IGLIIVGKDPFAFFGMQAPSIWQWG                         
                     IG+I++   PFA+   QA  +WQ G                         
                     IGIILLITTPFALSSPQA--LWQKG                         
T.congo.pschr-127998 agaatcaaactgcatccg  ctcag                         
                     tgtttttccctctgccac  tgaag                         
                     tcttggcaccttccttgt  cgagg                         


//
>T.congo.pschr.5:subseq(155850,175850).pep
IGIILLITTPFALSSPQALWQKG
//
T.congo.pschr.5:subseq(155850,175850)	GeneWise	match	127998	127930	19.78	-	.	T.congo.pschr.5:subseq(155850,175850)-genewise-prediction-1
T.congo.pschr.5:subseq(155850,175850)	GeneWise	cds	127998	127930	0.00	-	0	T.congo.pschr.5:subseq(155850,175850)-genewise-prediction-1
//
