
genewise output
Score 40.02 bits over entire alignment
Scores as bits over a synchronous coding model

Warning: The bits scores is not probablistically correct for single seqs
See WWW help for more info

SPP00000116_1.0   50 GYRRVFEEYMRVISQRYP---DIRIEGENYLPQPIYRHIASFLSVFKLV 
                     GY + FE+  + + +  P   D+RI G  Y   P     A + S   L  
                     GYAKYFEDMKQQLQRMLPNAEDVRIVGGTYPTPPARALAAKMCSTAFLA 
Lt_contig1348   2997 gtgattggaacccccaccaggggcagggatcaccgcgcggaattagtcg 
                     gacaataataaatagttcacaatgttggcacccccgctccatgcccttc 
                     acggttatgggggatgaccaatactactccccaaccgccgggcatctgc 


SPP00000116_1.0   96 LIGLIIVGKDPFAFFGMQAPSIWQWGQENKVYACMMVFFLSNMIENQCM 
                      +G+ + G+    F+    P+   +  + +        FL NM+ +    
                     SLGVALAGQQ-LVFL---PPTALNFIAQQRGLL-IGAGFLLNMVGSALS 
Lt_contig1348   3144 tcgggcggcc cgtc   ccagcatagcccgtt agggttcaaggagca 
                     ctgtctcgaa tttt   cccctattcaaggtt tgcgtttattggctg 
                     ccttctaaag cctg   tcctgctttggtcgg ctttcgctgccctcc 


SPP00000116_1.0  145 STGAFEITLNDVPVWSKLESGHLPSMQQLVQIL                 
                      TGAFE+TL+   ++SKL++G +P+  ++  I+                 
                     QTGAFEVTLDGELIFSKLQAGAVPTAAEIRHIV                 
Lt_contig1348   3276 caggtggatgggcattaccggggcagggaccag                 
                     acgctatctagatttcatacgctccccatgatt                 
                     gctccggcgtcatccgaagtatggcggaatttc                 


//
>Lt_contig1348.pep
GYAKYFEDMKQQLQRMLPNAEDVRIVGGTYPTPPARALAAKMCSTAFLASLGVALAGQQL
VFLPPTALNFIAQQRGLLIGAGFLLNMVGSALSQTGAFEVTLDGELIFSKLQAGAVPTAA
EIRHIV
//
Lt_contig1348	GeneWise	match	2997	3374	44.01	+	.	Lt_contig1348-genewise-prediction-1
Lt_contig1348	GeneWise	cds	2997	3374	0.00	+	0	Lt_contig1348-genewise-prediction-1
//

genewise output
Score 18.31 bits over entire alignment
Scores as bits over a synchronous coding model

Warning: The bits scores is not probablistically correct for single seqs
See WWW help for more info

SPP00000116_1.0  117 IWQWGQE                                           
                     +WQWG E                                           
                     LWQWGGE                                           
Lt_contig1348  -2129 ctctggg                                           
                     tgaggga                                           
                     ggagggg                                           


//
>Lt_contig1348.pep
LWQWGGE
//
Lt_contig1348	GeneWise	match	2129	2109	18.31	-	.	Lt_contig1348-genewise-prediction-1
Lt_contig1348	GeneWise	cds	2129	2109	0.00	-	0	Lt_contig1348-genewise-prediction-1
//
