
genewise output
Score 20.73 bits over entire alignment
Scores as bits over a synchronous coding model

Warning: The bits scores is not probablistically correct for single seqs
See WWW help for more info

SPP00000116_1.0    1 MRLLLLLLVAASAV                                    
                     + LLLLLL+AAS V                                    
                     LSLLLLLLIAASLV                                    
scaffold_11:su454310 ttttccttaggttg                                    
                     tctttttttccctt                                    
                     gggggcggtaaaaa                                    


//
>scaffold_11:subseq(890676,810195).pep
LSLLLLLLIAASLV
//
scaffold_11:subseq(890676,810195)	GeneWise	match	454310	454351	20.73	+	.	scaffold_11:subseq(890676,810195)-genewise-prediction-1
scaffold_11:subseq(890676,810195)	GeneWise	cds	454310	454351	0.00	+	0	scaffold_11:subseq(890676,810195)-genewise-prediction-1
//

genewise output
Score 62.51 bits over entire alignment
Scores as bits over a synchronous coding model

Warning: The bits scores is not probablistically correct for single seqs
See WWW help for more info

SPP00000116_1.0   50 GYRRVFEEYMRVISQRYPDIR--IEGENYLPQPIYRHIASFLSVFKLVL 
                     G +R F +    + Q +P++R  + G+NY P PI   +  FLSV++L   
                     GSKRNFLQVRDWLEQTFPELRGKVTGDNYPPPPIAELLMKFLSVIQLAG 
scaffold_11:sub-9982 gtacatccgagttgcatcgtcgagaggatccccaggttaatttgactgg 
                     gcagattatgagtaactcatggatcgaaacccctcatttattcttatcg 
                     gaatcttgagtgaaactgaatgatgttttaaaaaaaaagacatacaatt 


SPP00000116_1.0   97 IGLIIVGKDPFAFFGMQAPSIWQWGQ---ENKVYACMMVFFLSNMIENQ 
                     + + ++G++ F F+GM  P  W +G     N V   + ++++  +I N  
                     MAVALIGENVFRFIGMSRPPSW-YGDIVVKNAVPLGIGLYLIVPQILNG 
scaffold_11:sub-9835 agggtaggagtatagatccctt tggaggaaggccgagcttagccatag 
                     tctcttgaattgttgtcgcccg agatttaactctgtgtatttcattag 
                     gtcaattgtatatttgaaaaag cttttaattaattttatgtaaatgtt 


SPP00000116_1.0  143 CMSTGAFEITLNDVP-VWSKLESGHLPSMQQLVQIL              
                      + + AFE+ L+    ++SK+ +G +P+ + L+  L              
                     YIVSNAFEVVLDGTETIFSKIATGRMPAAEDLIDPL              
scaffold_11:sub-9691 tagtagtgggtggagaataaagagcacggggtagct              
                     attcactatttagcacttgatccggtcccaattact              
                     tcagtatgtaataaaccttaaaatggtaaatattaa              


//
>scaffold_11:subseq(890676,810195).pep
GSKRNFLQVRDWLEQTFPELRGKVTGDNYPPPPIAELLMKFLSVIQLAGMAVALIGENVF
RFIGMSRPPSWYGDIVVKNAVPLGIGLYLIVPQILNGYIVSNAFEVVLDGTETIFSKIAT
GRMPAAEDLIDPL
//
scaffold_11:subseq(890676,810195)	GeneWise	match	9982	9584	65.51	-	.	scaffold_11:subseq(890676,810195)-genewise-prediction-1
scaffold_11:subseq(890676,810195)	GeneWise	cds	9982	9584	0.00	-	0	scaffold_11:subseq(890676,810195)-genewise-prediction-1
//
