T-COFFEE, Version_7.54(Tue Jan 13 18:15:23 WEST 2009)
Cedric Notredame
CPU TIME:0 sec.
SCORE=85
*
BAD AVG GOOD
*
H.arabidopsidis : 88
P.ultimum : 88
S.parasitica : 81
SelJ_tetraodon_ : 82
cons : 85
H.arabidopsidis ---------VVALYAGTNQLFTKVDELVKVFYVGTRVRDAALVAA
P.ultimum IDVIALIPVVVALYAGTNSLFTKVDELVKVFYSGQRVRDAALVAA
S.parasitica --GLNKVPLLVARYAGKPELLDVVRQAVLVHQTTPLAIDVAIAGA
SelJ_tetraodon_ MDGVTKLAPVVAFYAGKPEMLGRVEDAVRVTQNNDACVAETLAAA
cons :** ***. .:: * : * * ::..*
H.arabidopsidis FVLEQVILGASVLQAMRMSIR-TERLSVKQ----RKVIFKAFTKS
P.ultimum FILEQVILGASVLQAMRMSIR-TERLTVKQ----RKMIFKAFTKS
S.parasitica IILEAVVVKQSSIKDAITAARSDARVEASVQALIQGVLDDAVASS
SelJ_tetraodon_ RFLEHFILNGPDPTALESVIR-QLRDPNRKQ---AQDLDQAVVGH
cons .** .:: . * * : .*..
H.arabidopsidis QLPSYEAIQKFGNRG------------SLPGGFHAVLQPLFVLND
P.ultimum QLPSYEAIQKFGNKG------------SLPRGFFAVLQPLFVLSD
S.parasitica D--VHAAVAKYGKSC------------PLPGSFQSGLFVLLTDGQ
SelJ_tetraodon_ I---HQVKENLSKTPQELIPAVFVNTXGLPGAFQAALHGVLTATN
cons : . : .: ** .* : * ::. :
H.arabidopsidis YPTAVRENIIGGGRTCRRAMFIGACFAAQDGLDVIPEGWIQKTQY
P.ultimum YPTAVRENIIGGGRTCRRAMFIGACFAAQDGLDAIPESWIKKTQY
S.parasitica YVSSVTKNITAGGDNCGRSIFVGAVAAAAT-DSPTPDAWQHKMTR
SelJ_tetraodon_ YVQAVRDTMSCGGCTCSRGSFIGACLGAQVGLEGIPASWSSRTQR
cons * :* ..: ** .* *. *:** .* . * .* :
H.arabidopsidis FDF------------I
P.ultimum YDVIETDANTLI--SY
S.parasitica ---------------F
SelJ_tetraodon_ YESVLEHAKKITSHLQ
cons