Command line: [exonerate -m p2g --showtargetgff -q query_dictyostelium_purpureum_SelR_aa.cisteina.fa -t purpureumCONTRAEmiliania_huxleyi.fastafetch.scaffold_21.fa]
Hostname: [ws101142.aulescm.upf.edu]

C4 Alignment:
------------
         Query: scaffold_27 dpurpureum selr protein
        Target: scaffold_21
         Model: protein2genome:local
     Raw score: 265
   Query range: 3 -> 127
  Target range: 815950 -> 816316

      4 : LeuAsnGluGlnGluTrpArgValLysLeuSerProGluGlnPheArgValLeuArgG :     23
          |||  !!!:...|||||||||!.!::!|||||| !!...:!!!:!..!|||||||||.
          LeuProAspSerGluTrpArgAlaArgLeuSerAlaArgGluTyrGluValLeuArgA
 815951 : CTGCCCGACTCCGAGTGGCGCGCGCGGCTCTCCGCGCGCGAGTACGAGGTTCTGCGGC : 816008

     24 : luLysGlyThrGluAlaProPheValGlyLysTyrThrAspAsnLysAspGluGlyLe :     42
          ..:!!||||||||| !! !!!::  !  !:!!!:!!.!!    !:!!!!:||||||:!
          rgGluGlyThrGluProAlaTrpSerHisGluPheAsnAlaLeuGluGluGluGlyVa
 816009 : GCGAGGGCACCGAGCCAGCCTGGTCGCACGAGTTCAACGCGCTCGAGGAGGAGGGCGT : 816065

     43 : uTyrGluCysAlaGlyCysGlyThrProLeuPheLysSerThrGlnLysPheHisSer :     61
          !!:!   ||||||!.!|||!.!||||||||||||:::|||  !:!!|||||| !!|||
          lPheThrCysAlaAlaCysAlaThrProLeuPheArgSerGlnGluLysPheAspSer
 816066 : CTTCACCTGCGCGGCGTGCGCGACGCCCCTCTTCCGCAGCCAAGAGAAGTTCGACTCG : 816122

     62 : GlyCysGlyTrpProSerPhePheAspSerLeuProAspAlaIleThrPheHisSerA :     81
          |||!  |||||||||||||||!::!   !!  !  !|||! !  !..!.!!   |||!
          GlySerGlyTrpProSerPheTrpAlaProAlaGlyAspAspAlaValIleThrSerV
 816123 : GGCTCGGGCTGGCCCTCGTTTTGGGCGCCGGCTGGCGACGACGCCGTCATTACGAGCG : 816182

     82 : spProSerIleProGlyArgProArgThrGluIleCysCysLysLysCysGlyGlyHi :    100
           !  !! !!  ! !|||! !||||||||||||:!: !!|||     !|||! !|||||
          alAspPheLysLeuGlyLeuProArgThrGluValArgCysAlaAlaCysAspGlyHi
 816183 : TCGACTTCAAGCTGGGCCTGCCCCGCACGGAGGTGCGCTGCGCCGCGTGCGACGGGCA : 816239

    101 : sLeuGlyHisValPheLysGlyGluGlyPheAsnThrProIleAspGlnArgHisCys :    119
          ||||||||||||||||   ..!!!:|||        !|||!  !  !:!|||:!!|||
          sLeuGlyHisValPhe---SerAspGly---ProArgProThrGlyArgArgTyrCys
 816240 : CCTCGGCCACGTCTTC---TCCGACGGC---CCGCGCCCGACGGGGCGGCGGTACTGC : 816290

    120 : ValAsnSerIleSerLeuAsnPhe :    127
          :!!|||.!!:!::!!:!!..!|||
          MetAsnGlyValAlaMetArgPhe
 816291 : ATGAATGGCGTGGCGATGCGCTTC : 816316

vulgar: scaffold_27 3 127 . scaffold_21 815950 816316 + 265 M 102 306 G 1 0 M 3 9 G 1 0 M 17 51
# --- START OF GFF DUMP ---
#
#
##gff-version 2
##source-version exonerate:protein2genome:local 2.2.0
##date 2010-03-10
##type DNA
#
#
# seqname source feature start end score strand frame attributes
#
scaffold_21	exonerate:protein2genome:local	gene	815951	816316	265	+	.	gene_id 1 ; sequence scaffold_27 ; gene_orientation .
scaffold_21	exonerate:protein2genome:local	cds	815951	816316	.	+	.	
scaffold_21	exonerate:protein2genome:local	exon	815951	816316	.	+	.	insertions 0 ; deletions 2
scaffold_21	exonerate:protein2genome:local	similarity	815951	816316	265	+	.	alignment_id 1 ; Query scaffold_27 ; Align 815951 4 306 ; Align 816257 107 9 ; Align 816266 111 51
# --- END OF GFF DUMP ---
#
-- completed exonerate analysis
