TBLASTN 2.2.13 [Nov-27-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= (189 letters) Database: genome.fa 572 sequences; 14,903,514 total letters Searching...................................................done Score E Sequences producing significant alignments: (bits) Value gb|AAQX01000071.1| Phytophthora ramorum strain Pr102 Pramorum_Co... 39 0.001 gb|AAQX01000183.1| Phytophthora ramorum strain Pr102 Pramorum_Co... 37 0.005 gb|AAQX01000098.1| Phytophthora ramorum strain Pr102 Pramorum_Co... 36 0.007 gb|AAQX01000384.1| Phytophthora ramorum strain Pr102 Pramorum_Co... 34 0.026 gb|AAQX01000194.1| Phytophthora ramorum strain Pr102 Pramorum_Co... 34 0.034 gb|AAQX01000116.1| Phytophthora ramorum strain Pr102 Pramorum_Co... 33 0.045 gb|AAQX01000489.1| Phytophthora ramorum strain Pr102 Pramorum_Co... 33 0.059 gb|AAQX01000413.1| Phytophthora ramorum strain Pr102 Pramorum_Co... 32 0.10 gb|AAQX01000323.1| Phytophthora ramorum strain Pr102 Pramorum_Co... 32 0.13 gb|AAQX01000189.1| Phytophthora ramorum strain Pr102 Pramorum_Co... 32 0.13 gb|AAQX01000050.1| Phytophthora ramorum strain Pr102 Pramorum_Co... 31 0.22 gb|AAQX01000514.1| Phytophthora ramorum strain Pr102 Pramorum_Co... 31 0.29 gb|AAQX01000399.1| Phytophthora ramorum strain Pr102 Pramorum_Co... 31 0.29 gb|AAQX01000552.1| Phytophthora ramorum strain Pr102 Pramorum_Co... 30 0.38 gb|AAQX01000265.1| Phytophthora ramorum strain Pr102 Pramorum_Co... 30 0.38 gb|AAQX01000208.1| Phytophthora ramorum strain Pr102 Pramorum_Co... 30 0.50 gb|AAQX01000542.1| Phytophthora ramorum strain Pr102 Pramorum_Co... 30 0.65 gb|AAQX01000233.1| Phytophthora ramorum strain Pr102 Pramorum_Co... 30 0.65 gb|AAQX01000139.1| Phytophthora ramorum strain Pr102 Pramorum_Co... 30 0.65 gb|AAQX01000112.1| Phytophthora ramorum strain Pr102 Pramorum_Co... 30 0.65 gb|AAQX01000458.1| Phytophthora ramorum strain Pr102 Pramorum_Co... 29 1.1 gb|AAQX01000392.1| Phytophthora ramorum strain Pr102 Pramorum_Co... 29 1.1 gb|AAQX01000289.1| Phytophthora ramorum strain Pr102 Pramorum_Co... 29 1.1 gb|AAQX01000016.1| Phytophthora ramorum strain Pr102 Pramorum_Co... 29 1.1 gb|AAQX01000474.1| Phytophthora ramorum strain Pr102 Pramorum_Co... 28 1.4 gb|AAQX01000369.1| Phytophthora ramorum strain Pr102 Pramorum_Co... 28 1.4 gb|AAQX01000454.1| Phytophthora ramorum strain Pr102 Pramorum_Co... 28 1.9 gb|AAQX01000364.1| Phytophthora ramorum strain Pr102 Pramorum_Co... 28 1.9 gb|AAQX01000103.1| Phytophthora ramorum strain Pr102 Pramorum_Co... 28 2.5 gb|AAQX01000500.1| Phytophthora ramorum strain Pr102 Pramorum_Co... 27 3.2 gb|AAQX01000368.1| Phytophthora ramorum strain Pr102 Pramorum_Co... 27 3.2 gb|AAQX01000053.1| Phytophthora ramorum strain Pr102 Pramorum_Co... 27 3.2 gb|AAQX01000325.1| Phytophthora ramorum strain Pr102 Pramorum_Co... 27 4.2 gb|AAQX01000152.1| Phytophthora ramorum strain Pr102 Pramorum_Co... 27 4.2 gb|AAQX01000559.1| Phytophthora ramorum strain Pr102 Pramorum_Co... 26 7.2 gb|AAQX01000292.1| Phytophthora ramorum strain Pr102 Pramorum_Co... 26 7.2 gb|AAQX01000172.1| Phytophthora ramorum strain Pr102 Pramorum_Co... 26 7.2 gb|AAQX01000170.1| Phytophthora ramorum strain Pr102 Pramorum_Co... 26 7.2 gb|AAQX01000169.1| Phytophthora ramorum strain Pr102 Pramorum_Co... 26 7.2 gb|AAQX01000509.1| Phytophthora ramorum strain Pr102 Pramorum_Co... 26 9.4 gb|AAQX01000372.1| Phytophthora ramorum strain Pr102 Pramorum_Co... 26 9.4 gb|AAQX01000186.1| Phytophthora ramorum strain Pr102 Pramorum_Co... 26 9.4 gb|AAQX01000136.1| Phytophthora ramorum strain Pr102 Pramorum_Co... 26 9.4 gb|AAQX01000072.1| Phytophthora ramorum strain Pr102 Pramorum_Co... 26 9.4 gb|AAQX01000017.1| Phytophthora ramorum strain Pr102 Pramorum_Co... 26 9.4 >gb|AAQX01000071.1| Phytophthora ramorum strain Pr102 Pramorum_Cont71, whole genome shotgun sequence Length = 115038 Score = 38.9 bits (89), Expect = 0.001 Identities = 33/113 (29%), Positives = 53/113 (46%), Gaps = 5/113 (4%) Frame = +3 Query: 47 VFQKLSARLRALRQRQ--LDRAAAAVEPDVVVKRQEALAAARLKMQE--ELNAQVEKHKE 102 + Q+ +A L R+RQ R AA D +A AA+R +E + A+ +KH+ Sbjct: 33555 LMQEQAAALAQERERQDAAMRKAATELQDAAAAAAKAAAASRQAQEEAARVAAEFDKHRG 33734 Query: 103 KLKQLEEEKRRQ-KIEMWDSMQEGKSYKGNAKKPQEEDSPGPSTSSVLKRKSD 154 + +QLEE + Q K ++ D + E K + ++ E D S KR D Sbjct: 33735 ETQQLEEAQAAQSKHKLADRLAEKKRKQQLKQQQAENDKQDSSADDAAKRLQD 33893 Score = 30.8 bits (68), Expect = 0.29 Identities = 21/54 (38%), Positives = 24/54 (44%) Frame = +2 Query: 134 KPQEEDSPGPSTSSVLKRKSDRKPLRGGGYNPLSGEGGGACSWRPGRRGPSSGG 187 KP SP STS+ GGG SG GGGA + G P+SGG Sbjct: 4772 KPAASSSPFGSTSAF-----------GGGAGTTSGFGGGAATGGFGTPTPASGG 4900 Score = 28.1 bits (61), Expect = 1.9 Identities = 27/72 (37%), Positives = 35/72 (48%), Gaps = 4/72 (5%) Frame = +3 Query: 49 QKLSARLRALRQRQLDRAAA--AVEPDVVVKRQEA--LAAARLKMQEELNAQVEKHKEKL 104 Q+ A+ RA +QRQ + AAA A E +E LAA R K + AQ + E Sbjct: 34386 QQRIAQRRARKQRQEEEAAANNAQEQQTSSDAEEEARLAAEREKAEALAQAQAQAEAEA- 34562 Query: 105 KQLEEEKRRQKI 116 EEK RQ+I Sbjct: 34563 ----EEKERQEI 34586 >gb|AAQX01000183.1| Phytophthora ramorum strain Pr102 Pramorum_Cont183, whole genome shotgun sequence Length = 87077 Score = 36.6 bits (83), Expect = 0.005 Identities = 29/98 (29%), Positives = 51/98 (52%), Gaps = 9/98 (9%) Frame = -1 Query: 68 AAVEPDVVVKRQEAL------AAARLKMQEELNAQVEKHKEKLKQLEEEKRRQKIEMWDS 121 AA E + +V+R E L A ++L E Q+E+ KE +K L K +K+E ++ Sbjct: 6362 AAEEVEELVQRTEKLEGVVAQADSKLTELETEVTQIERTKEAMKYLVGHKEERKVET-ET 6186 Query: 122 MQEGKSYKGNAKKPQEE---DSPGPSTSSVLKRKSDRK 156 +++ K K K + E ++ PS+++V K K + K Sbjct: 6185 VEKPKKKKATKVKKEVESKVETETPSSTNVEKEKKEEK 6072 Score = 26.2 bits (56), Expect = 7.2 Identities = 16/35 (45%), Positives = 17/35 (48%), Gaps = 6/35 (17%) Frame = +3 Query: 161 GGYNPL--SGEGGGACSWRPGR----RGPSSGG*G 189 GGY P G GGG C + P R PS GG G Sbjct: 52995 GGYRPAGGGGGGGGGCPYVPERCTEGSIPSGGGGG 53099 >gb|AAQX01000098.1| Phytophthora ramorum strain Pr102 Pramorum_Cont98, whole genome shotgun sequence Length = 44948 Score = 36.2 bits (82), Expect = 0.007 Identities = 31/118 (26%), Positives = 56/118 (47%), Gaps = 11/118 (9%) Frame = +3 Query: 47 VFQKLSARLRALRQRQLD----RAAAAVEPDVVVKRQEALAAARLKMQEELNAQV----- 97 VF++ S Q D + A+A+E D + A +K +EE+ +V Sbjct: 37992 VFKRASTSFSEQSTNQGDSDDGQQASALEQD------QTWALGLVKEREEVLHKVLLTAS 38153 Query: 98 EKHKEKLKQLEEEKRRQKIEMWDSMQEGKSYKGNAKKPQEEDSP--GPSTSSVLKRKS 153 EKH+++LKQ E++KR Q+ + G S +++ ++ D P P+ + R+S Sbjct: 38154 EKHEQRLKQEEKQKRAQRRRTARYVSSGSSDSSDSESDEDNDEPAAAPARRELSSRRS 38327 >gb|AAQX01000384.1| Phytophthora ramorum strain Pr102 Pramorum_Cont384, whole genome shotgun sequence Length = 79822 Score = 34.3 bits (77), Expect = 0.026 Identities = 18/71 (25%), Positives = 39/71 (54%) Frame = -1 Query: 47 VFQKLSARLRALRQRQLDRAAAAVEPDVVVKRQEALAAARLKMQEELNAQVEKHKEKLKQ 106 + ++L + RA AA + + + K QEA A+++ Q++ + +K + + K Sbjct: 51235 ILERLKNKTRAAAAAGGTNGAATTQQEQLKKAQEAQRLAQMQEQQKKMQEQQKAEAQRKL 51056 Query: 107 LEEEKRRQKIE 117 LEE+K++ ++E Sbjct: 51055 LEEQKKKLQLE 51023 >gb|AAQX01000194.1| Phytophthora ramorum strain Pr102 Pramorum_Cont194, whole genome shotgun sequence Length = 5027 Score = 33.9 bits (76), Expect = 0.034 Identities = 24/105 (22%), Positives = 49/105 (46%), Gaps = 1/105 (0%) Frame = -3 Query: 66 AAAAVEPDVVVKRQEALAAARLKMQEELNAQVEK-HKEKLKQLEEEKRRQKIEMWDSMQE 124 AA + D++ ++ E +A RLK Q + ++ ++ K KLK+ R ++ + +QE Sbjct: 3981 AAQLSQADIIERQAETIA--RLKRQVKKGSEYKQLTKTKLKEAAARLREYRLRVETLLQE 3808 Query: 125 GKSYKGNAKKPQEEDSPGPSTSSVLKRKSDRKPLRGGGYNPLSGE 169 G++ K K ++E P + + + + LSG+ Sbjct: 3807 GETLKKQVKANKQEVKPKKQVRNAATQTESKATVSRTCQTTLSGQ 3673 >gb|AAQX01000116.1| Phytophthora ramorum strain Pr102 Pramorum_Cont116, whole genome shotgun sequence Length = 11639 Score = 33.5 bits (75), Expect = 0.045 Identities = 20/48 (41%), Positives = 26/48 (54%), Gaps = 7/48 (14%) Frame = +2 Query: 142 GPSTSSVLKRKS-------DRKPLRGGGYNPLSGEGGGACSWRPGRRG 182 GP+ S +++S DR+ RG G N G+GGGAC R RRG Sbjct: 3701 GPAARSHRRQRSGGRAAVPDRQGRRGSG-NEAGGQGGGACCCRSDRRG 3841 >gb|AAQX01000489.1| Phytophthora ramorum strain Pr102 Pramorum_Cont489, whole genome shotgun sequence Length = 83904 Score = 33.1 bits (74), Expect = 0.059 Identities = 42/140 (30%), Positives = 63/140 (45%), Gaps = 3/140 (2%) Frame = -2 Query: 2 ERQEESLSARPALETEGLRFLHTTVGSLLATYGWYIVFSCILLYVVFQKLSARLRALRQR 61 E Q SLS+R L L T SLLA+ + + Q + +R LR Sbjct: 22109 EAQSASLSSRTTALKADLETLETRYASLLASAKTHEEMATRATR-EGQMRAEEVRLLRNE 21933 Query: 62 QLDRAAAAVEPDVVVKRQEALAAARLKMQEELNAQVEKH---KEKLKQLEEEKRRQKIEM 118 A +E + +K Q L A +QE+L + EK EKL+QLEE KR+ ++ Sbjct: 21932 SDQLRACNIE--LKMKTQVELEA----LQEQLRVRKEKQYQLLEKLQQLEEAKRQSDDQL 21771 Query: 119 WDSMQEGKSYKGNAKKPQEE 138 + E K+ K +A+ + E Sbjct: 21770 --ASAEEKTRKLHARNQELE 21717 >gb|AAQX01000413.1| Phytophthora ramorum strain Pr102 Pramorum_Cont413, whole genome shotgun sequence Length = 1334 Score = 32.3 bits (72), Expect = 0.10 Identities = 28/105 (26%), Positives = 53/105 (50%), Gaps = 4/105 (3%) Frame = -2 Query: 50 KLSARLRALRQRQLDRAAAAVEPDVVVKRQEAL---AAARLKMQEE-LNAQVEKHKEKLK 105 +L + L Q +L A +E D +AL A A+ M++ L A++++ K KLK Sbjct: 772 QLHTKAEQLEQEKLSVEAKLIEMDERESDVDALMNDAKAKFAMEKAVLMAELDELKRKLK 593 Query: 106 QLEEEKRRQKIEMWDSMQEGKSYKGNAKKPQEEDSPGPSTSSVLK 150 Q + + +Q+ + ++ Q K+ +EED+ STS+ ++ Sbjct: 592 QQQMLREQQQQQFLETKQV-------VKEVEEEDTARGSTSAAME 479 >gb|AAQX01000323.1| Phytophthora ramorum strain Pr102 Pramorum_Cont323, whole genome shotgun sequence Length = 139256 Score = 32.0 bits (71), Expect = 0.13 Identities = 27/84 (32%), Positives = 40/84 (47%) Frame = +1 Query: 82 LAAARLKMQEELNAQVEKHKEKLKQLEEEKRRQKIEMWDSMQEGKSYKGNAKKPQEEDSP 141 L A+ K QEE + +K+K+K K+ EEEK ++ E D E + EE+ Sbjct: 7444 LTRAQAKKQEE---EAKKNKKKSKK-EEEKEEEEEEEEDEADE---------EEDEEEDE 7584 Query: 142 GPSTSSVLKRKSDRKPLRGGGYNP 165 +V +RK R R GG+ P Sbjct: 7585 DEEADAVERRKGTR---RRGGHKP 7647 >gb|AAQX01000189.1| Phytophthora ramorum strain Pr102 Pramorum_Cont189, whole genome shotgun sequence Length = 83328 Score = 32.0 bits (71), Expect = 0.13 Identities = 26/93 (27%), Positives = 48/93 (51%), Gaps = 2/93 (2%) Frame = +2 Query: 49 QKLSARLRALRQRQLDRAAAAVEPDVVVKRQEALAAARLKMQEELNAQVEKHKEKLKQLE 108 QK A L L R + A E + R+E R++ +EE E+ +E+ ++E Sbjct: 72212 QKKKAMLERLSAR-VAHAKERYEEEQRHLREEEEEKERVRREEE----AERERERQLEVE 72376 Query: 109 EEKRRQKIEMWDSMQ--EGKSYKGNAKKPQEED 139 EE RRQ+ E + ++ E K ++ A++ ++E+ Sbjct: 72377 EELRRQEEEEAEELRIAEEKEHEEKAQRERDEE 72475 Score = 26.2 bits (56), Expect = 7.2 Identities = 25/125 (20%), Positives = 50/125 (40%), Gaps = 15/125 (12%) Frame = -1 Query: 42 ILLYVVFQKLSARLRALRQRQLDRAAAAVEPDVVVKRQEALAAARLKMQEELN--AQVEK 99 + Y +++L L+ + + A +E + K +AL K+ E + +VEK Sbjct: 42267 VFTYADYEELQQCLQTTSE---ENEARVLEIKSLRKEADALRRKAAKLPECVAHIERVEK 42097 Query: 100 HKEKLKQLEEEKRRQKIE-------------MWDSMQEGKSYKGNAKKPQEEDSPGPSTS 146 EKL+ E R +++E ++ + E + + + Q+ + P T Sbjct: 42096 RNEKLQSANETLREERMEERAVLDSLRSMNLVYKKIAESRPFANDCTCSQQPEEADPQTL 41917 Query: 147 SVLKR 151 V R Sbjct: 41916 GVTVR 41902 >gb|AAQX01000050.1| Phytophthora ramorum strain Pr102 Pramorum_Cont50, whole genome shotgun sequence Length = 556376 Score = 31.2 bits (69), Expect = 0.22 Identities = 15/38 (39%), Positives = 18/38 (47%) Frame = -3 Query: 150 KRKSDRKPLRGGGYNPLSGEGGGACSWRPGRRGPSSGG 187 + ++DR GGG G GGG R G RG GG Sbjct: 10272 EERTDRNDYGGGGGGHYGGRGGGGGGGRGGGRGGGRGG 10159 Score = 26.6 bits (57), Expect = 5.5 Identities = 10/18 (55%), Positives = 12/18 (66%) Frame = -2 Query: 170 GGGACSWRPGRRGPSSGG 187 GG AC+WRP RR + G Sbjct: 12964 GGEACAWRPHRRRTGAEG 12911 >gb|AAQX01000514.1| Phytophthora ramorum strain Pr102 Pramorum_Cont514, whole genome shotgun sequence Length = 96213 Score = 30.8 bits (68), Expect = 0.29 Identities = 26/104 (25%), Positives = 48/104 (46%), Gaps = 13/104 (12%) Frame = -2 Query: 66 AAAAVEPDVVVKRQEALAAARLKMQEELN----------AQVEKHKEKLKQLEEEKRRQK 115 AAA + + + R+K +EE + +VEK K L++ E +++R K Sbjct: 13997 AAAEADDEAESDAKRRRGTLRIKDEEEDDEDDDADVAGLTEVEKEKRLLEKYEAKEKRNK 13818 Query: 116 ---IEMWDSMQEGKSYKGNAKKPQEEDSPGPSTSSVLKRKSDRK 156 ++ + +GK+ G +++ EED P R+SDR+ Sbjct: 13817 ERELKKRLAASQGKAEDGFSEEDDEEDLPSTRRGG-RSRESDRR 13689 >gb|AAQX01000399.1| Phytophthora ramorum strain Pr102 Pramorum_Cont399, whole genome shotgun sequence Length = 202332 Score = 30.8 bits (68), Expect = 0.29 Identities = 21/67 (31%), Positives = 36/67 (53%), Gaps = 2/67 (2%) Frame = +3 Query: 52 SARLRALRQRQLDRAAAAVEPDVVVKRQEALAAARLKMQEELNAQVEKHK--EKLKQLEE 109 S+ +R + + AA + VVK L A+L + E + +VE + ++L+QLEE Sbjct: 187365 SSEMRRRASHEAAKLAAKHKKPTVVKTGNRLTQAQL-LAEAVRTEVENTQSLQRLEQLEE 187541 Query: 110 EKRRQKI 116 EK+ + I Sbjct: 187542 EKKAESI 187562 Score = 25.8 bits (55), Expect = 9.4 Identities = 21/69 (30%), Positives = 33/69 (47%) Frame = +2 Query: 44 LYVVFQKLSARLRALRQRQLDRAAAAVEPDVVVKRQEALAAARLKMQEELNAQVEKHKEK 103 L+++ Q+ A R++Q R + V +KR +AL AR +EK Sbjct: 27380 LFIIDQEFKLAEEAERKKQ--REEEELRRRVQMKRHDALHNAR-------------QREK 27514 Query: 104 LKQLEEEKR 112 L QL+EEK+ Sbjct: 27515 LLQLKEEKK 27541 >gb|AAQX01000552.1| Phytophthora ramorum strain Pr102 Pramorum_Cont552, whole genome shotgun sequence Length = 199956 Score = 30.4 bits (67), Expect = 0.38 Identities = 32/115 (27%), Positives = 53/115 (46%), Gaps = 12/115 (10%) Frame = +2 Query: 56 RALRQRQLDRAAAAVEPDVVVKRQEALAAARLKMQEELNAQV------------EKHKEK 103 R LR+ Q++ A E V +Q A A+ R +++EE A E+ K Sbjct: 110783 RRLRREQIENERRAEEE--VRMKQAADASERRRLEEERKAAELAATEEAARLAEEESARK 110956 Query: 104 LKQLEEEKRRQKIEMWDSMQEGKSYKGNAKKPQEEDSPGPSTSSVLKRKSDRKPL 158 L++ EEE+RRQ E ++E + + ++ EE + KRK+D + L Sbjct: 110957 LQESEEERRRQAEEA-ARLEELRLIEEEERREAEE--------AEAKRKADEERL 111094 >gb|AAQX01000265.1| Phytophthora ramorum strain Pr102 Pramorum_Cont265, whole genome shotgun sequence Length = 198112 Score = 30.4 bits (67), Expect = 0.38 Identities = 21/64 (32%), Positives = 29/64 (45%) Frame = -2 Query: 126 KSYKGNAKKPQEEDSPGPSTSSVLKRKSDRKPLRGGGYNPLSGEGGGACSWRPGRRGPSS 185 +SY + Q++D+P + R S+R RG G S G G S R GR G + Sbjct: 171630 RSYSSQKTQAQQDDAPQDGDLAQPPRSSERFASRGRG----SMRGRGMASSRGGRGGRAG 171463 Query: 186 GG*G 189 G G Sbjct: 171462 RGRG 171451 Score = 28.9 bits (63), Expect = 1.1 Identities = 26/99 (26%), Positives = 41/99 (41%), Gaps = 7/99 (7%) Frame = +1 Query: 60 QRQLDRAAAAVEPDVVVKRQEALAAARLKMQEELNAQVEKHK-------EKLKQLEEEKR 112 +RQL R A + K Q+A AAR K+ E A V K + L+ ++ Sbjct: 91246 KRQLQRKAQEAKETARHKMQDAQKAARDKVDETREAAVAKARGLGANMLHNLRSNQKNAS 91425 Query: 113 RQKIEMWDSMQEGKSYKGNAKKPQEEDSPGPSTSSVLKR 151 RQ E +Q S + K + + S + S+ +R Sbjct: 91426 RQLRENAQELQRSASDTVDGLKKRAQQSATDAASAAQER 91542 Score = 26.6 bits (57), Expect = 5.5 Identities = 13/25 (52%), Positives = 14/25 (56%) Frame = -3 Query: 162 GYNPLSGEGGGACSWRPGRRGPSSG 186 G N SGEGG +WR RRG G Sbjct: 28124 GVNHASGEGGITGTWRVLRRGVGVG 28050 >gb|AAQX01000208.1| Phytophthora ramorum strain Pr102 Pramorum_Cont208, whole genome shotgun sequence Length = 119922 Score = 30.0 bits (66), Expect = 0.50 Identities = 16/35 (45%), Positives = 19/35 (54%), Gaps = 1/35 (2%) Frame = -3 Query: 148 VLKRKSDRKPLRGGGYNPLSG-EGGGACSWRPGRR 181 +L R SDR LR GGY+P +G C W P R Sbjct: 116194 ILDRPSDRSLLRWGGYHPPAGLRAP*QCYWSPRLR 116090 >gb|AAQX01000542.1| Phytophthora ramorum strain Pr102 Pramorum_Cont542, whole genome shotgun sequence Length = 68386 Score = 29.6 bits (65), Expect = 0.65 Identities = 21/61 (34%), Positives = 33/61 (54%), Gaps = 6/61 (9%) Frame = +2 Query: 37 IVFSCILLYVVFQKLSARLR------ALRQRQLDRAAAAVEPDVVVKRQEALAAARLKMQ 90 +VFS + L +VF +SARL ALR+R A AA + +V++++A+ Q Sbjct: 53279 LVFSIMCLTLVFVAISARLSTELKLLALRERNRMYAQAATKIQNLVRKRQAIHRVERLRQ 53458 Query: 91 E 91 E Sbjct: 53459 E 53461 >gb|AAQX01000233.1| Phytophthora ramorum strain Pr102 Pramorum_Cont233, whole genome shotgun sequence Length = 78383 Score = 29.6 bits (65), Expect = 0.65 Identities = 28/130 (21%), Positives = 51/130 (39%), Gaps = 1/130 (0%) Frame = -1 Query: 41 CILLYVVFQKLSARLRALRQRQLDRAAAAVEPDVVVKRQEALAAARLKMQEELNAQVEKH 100 C+LL + LR + + R A VEPD + Q +++E + + Sbjct: 43751 CLLLLCTTRNGRKELRRKKVYPIIREAHLVEPDEEIGDQ-IYKLVDFLIRDEEGEEPDWD 43575 Query: 101 KEKLKQLEEEKRRQKIEMWDSMQEGKSYKGNAKKPQE-EDSPGPSTSSVLKRKSDRKPLR 159 + + K E+ + E + + K +E + P P T + + +RKP+ Sbjct: 43574 EVRTKSFAAEQETKTNENGEKVLPPIPAPAPVKAIEESKKEPEPETKAKKPKAIERKPVT 43395 Query: 160 GGGYNPLSGE 169 + P SGE Sbjct: 43394 ASSFLPTSGE 43365 Score = 28.9 bits (63), Expect = 1.1 Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 3/48 (6%) Frame = +3 Query: 88 KMQEELN---AQVEKHKEKLKQLEEEKRRQKIEMWDSMQEGKSYKGNA 132 + QEEL A+ + K +L++ EEE + IE WD Q G Y N+ Sbjct: 19605 QQQEELKQQRAEARRLKRQLQREEEEAKAAWIESWD--QNGNKYYFNS 19742 >gb|AAQX01000139.1| Phytophthora ramorum strain Pr102 Pramorum_Cont139, whole genome shotgun sequence Length = 58346 Score = 29.6 bits (65), Expect = 0.65 Identities = 15/46 (32%), Positives = 20/46 (43%) Frame = +1 Query: 133 KKPQEEDSPGPSTSSVLKRKSDRKPLRGGGYNPLSGEGGGACSWRP 178 K+P P + + +R R+P G LS E G SWRP Sbjct: 36070 KRPSSHKKPAKHANQLAQRTGSRRPTAGSRQETLSPEPG--YSWRP 36201 >gb|AAQX01000112.1| Phytophthora ramorum strain Pr102 Pramorum_Cont112, whole genome shotgun sequence Length = 222948 Score = 29.6 bits (65), Expect = 0.65 Identities = 28/125 (22%), Positives = 53/125 (42%), Gaps = 9/125 (7%) Frame = +2 Query: 1 MERQEESLSARPA----LETEGLRFLHTTVGSLLATYGWYIVFSCILLYVVFQKLSARLR 56 +ERQ ++L + L LR LH T+ L + C + + +++ Sbjct: 140786 LERQCQALKKQQERTKELHDRELRILHDTIRQLRDSNDEMETQHCKEKQALAGTIE-KIK 140962 Query: 57 ALRQRQLDRAAAAVEPDVVVKR-----QEALAAARLKMQEELNAQVEKHKEKLKQLEEEK 111 L+Q + + A V D+ + E +A + +E ++A +HK +L QLE + Sbjct: 140963 TLQQAEAQKIEAQVRSDIEQQMLCELLPEKMANLEKRHEEAISAMTAEHKRQLSQLEAQL 141142 Query: 112 RRQKI 116 K+ Sbjct: 141143 DEVKL 141157 >gb|AAQX01000458.1| Phytophthora ramorum strain Pr102 Pramorum_Cont458, whole genome shotgun sequence Length = 219070 Score = 28.9 bits (63), Expect = 1.1 Identities = 27/104 (25%), Positives = 42/104 (40%), Gaps = 14/104 (13%) Frame = -2 Query: 98 EKHKEKLKQLEEEKRRQKI---EMWDSMQEGKSYKGNA--------KKPQEEDSPGPSTS 146 E H+ + +++ R Q+ E+ +E + G+ +P +PGP+ Sbjct: 212391 ELHRARRREVIHVVRNQRAARDEVHPQHREAADHTGHTCTLVGCALAQPSHLRTPGPAAP 212212 Query: 147 SVLKRKS---DRKPLRGGGYNPLSGEGGGACSWRPGRRGPSSGG 187 S L+R R P + S G CS GRRG SGG Sbjct: 212211 STLRRAPGTWQRAPA-----DTQSAAGNRQCSRVRGRRGTCSGG 212095 >gb|AAQX01000392.1| Phytophthora ramorum strain Pr102 Pramorum_Cont392, whole genome shotgun sequence Length = 70786 Score = 28.9 bits (63), Expect = 1.1 Identities = 19/61 (31%), Positives = 28/61 (45%) Frame = +3 Query: 125 GKSYKGNAKKPQEEDSPGPSTSSVLKRKSDRKPLRGGGYNPLSGEGGGACSWRPGRRGPS 184 G S G A+ Q G + + + R+S R P+ + + G G RPG+RGP Sbjct: 723 GGSVAGAAQLTQGSAGEGAAAAHYVVRRSARGPV---AVHRIQGGAQGYGGRRPGQRGPG 893 Query: 185 S 185 S Sbjct: 894 S 896 >gb|AAQX01000289.1| Phytophthora ramorum strain Pr102 Pramorum_Cont289, whole genome shotgun sequence Length = 54113 Score = 28.9 bits (63), Expect = 1.1 Identities = 16/64 (25%), Positives = 30/64 (46%) Frame = -1 Query: 13 ALETEGLRFLHTTVGSLLATYGWYIVFSCILLYVVFQKLSARLRALRQRQLDRAAAAVEP 72 A E RF + +G + W ++FSC + V+ + + +RAL + +D + P Sbjct: 28637 AFSAETSRFTNLRIGDKVDVVSWLVLFSCSVHAVIAVSMLS-MRALIRAAIDSFITQLRP 28461 Query: 73 DVVV 76 V+ Sbjct: 28460 QQVL 28449 >gb|AAQX01000016.1| Phytophthora ramorum strain Pr102 Pramorum_Cont16, whole genome shotgun sequence Length = 254036 Score = 28.9 bits (63), Expect = 1.1 Identities = 21/51 (41%), Positives = 26/51 (50%) Frame = +3 Query: 136 QEEDSPGPSTSSVLKRKSDRKPLRGGGYNPLSGEGGGACSWRPGRRGPSSG 186 Q+ GPS + +R+ R RG + G GG A S R GRRG SSG Sbjct: 230652 QQRQDGGPSFGAQHRRR*VR*--RGAARQAVHGAGGSA-SRRQGRRGSSSG 230795 Score = 26.6 bits (57), Expect = 5.5 Identities = 13/49 (26%), Positives = 26/49 (53%), Gaps = 4/49 (8%) Frame = -2 Query: 103 KLKQLEEEKRRQKIEMWDSMQEGKSYKGNAKK----PQEEDSPGPSTSS 147 K K+ +++++R+ WD + YKG K+ P E++ P T++ Sbjct: 167194 KAKKADKKEKRKAAFGWDVFNQDSLYKGYKKRLVSLPTAEENTTPVTAT 167048 Score = 26.2 bits (56), Expect = 7.2 Identities = 15/31 (48%), Positives = 16/31 (51%) Frame = -1 Query: 159 RGGGYNPLSGEGGGACSWRPGRRGPSSGG*G 189 RGGG + G GGGA R G G GG G Sbjct: 99479 RGGGVPMMGGRGGGAME-RYGPGGMQHGGPG 99390 >gb|AAQX01000474.1| Phytophthora ramorum strain Pr102 Pramorum_Cont474, whole genome shotgun sequence Length = 67801 Score = 28.5 bits (62), Expect = 1.4 Identities = 26/69 (37%), Positives = 30/69 (43%), Gaps = 9/69 (13%) Frame = +2 Query: 130 GNAKKPQEED-SPGPSTSSVLKRKSDRK---PLRGGGYNPLSGEG----GGACSW-RPGR 180 GN PQ++ S GP+T S P G NP+ GEG GG CS G Sbjct: 48542 GNQGWPQQQGWSSGPATGWTPPSNSQGNQWGPQLGWPSNPIGGEGGQTIGGDCSGSSDGA 48721 Query: 181 RGPSSGG*G 189 P SGG G Sbjct: 48722 WTPPSGGQG 48748 >gb|AAQX01000369.1| Phytophthora ramorum strain Pr102 Pramorum_Cont369, whole genome shotgun sequence Length = 100296 Score = 28.5 bits (62), Expect = 1.4 Identities = 21/63 (33%), Positives = 32/63 (50%), Gaps = 3/63 (4%) Frame = -3 Query: 54 RLRALRQRQLDRAAAAVEPDVVVKRQEALAAARLKMQEELNAQVEKH---KEKLKQLEEE 110 R+ + R+ R A E VVV QEALAAA L QE + + K ++ ++E+ Sbjct: 4864 RMPSDRRMLSPRPAPRREDAVVVVAQEALAAAALCWQERAERLAQANTRLKSRVSEVEDA 4685 Query: 111 KRR 113 R+ Sbjct: 4684 HRK 4676 >gb|AAQX01000454.1| Phytophthora ramorum strain Pr102 Pramorum_Cont454, whole genome shotgun sequence Length = 187121 Score = 28.1 bits (61), Expect = 1.9 Identities = 31/132 (23%), Positives = 51/132 (38%), Gaps = 4/132 (3%) Frame = -2 Query: 55 LRALRQRQLDRAAAAVEPDVVVKRQEALAAARL--KMQEELNAQVEKHKEKLKQLEEEKR 112 +R R R L AAAA R A A++ ++ + Q + E L+ Sbjct: 46966 VRRPRARLLGAAAAAPTGARAAARANPAA*AQVARRVGHRVRLQRRRRPEPLRAAAAALA 46787 Query: 113 RQKIEMWDSMQEGKSYKGNAKKPQEEDSPGPSTSSVLKRKSDRKPLRGGGYNPLSG--EG 170 R + G Y+G+A +PQ P P + ++ ++P P + G Sbjct: 46786 RAAPTGQRLLAPGSRYRGSADRPQGAQRPTPQE*E-RRAQASQRPASRHATTPRAAPQAG 46610 Query: 171 GGACSWRPGRRG 182 GG + G+RG Sbjct: 46609 GGDRRYGEGKRG 46574 Score = 25.8 bits (55), Expect = 9.4 Identities = 11/22 (50%), Positives = 12/22 (54%) Frame = -3 Query: 161 GGYNPLSGEGGGACSWRPGRRG 182 GG G GG +CSW RRG Sbjct: 55419 GGRVSSYGTGGASCSWGATRRG 55354 >gb|AAQX01000364.1| Phytophthora ramorum strain Pr102 Pramorum_Cont364, whole genome shotgun sequence Length = 4164 Score = 28.1 bits (61), Expect = 1.9 Identities = 12/24 (50%), Positives = 12/24 (50%) Frame = -1 Query: 159 RGGGYNPLSGEGGGACSWRPGRRG 182 RGG P GG WR GRRG Sbjct: 1254 RGGRRTPTLSAGGRGLGWRGGRRG 1183 >gb|AAQX01000103.1| Phytophthora ramorum strain Pr102 Pramorum_Cont103, whole genome shotgun sequence Length = 26684 Score = 27.7 bits (60), Expect = 2.5 Identities = 14/50 (28%), Positives = 24/50 (48%) Frame = -1 Query: 121 SMQEGKSYKGNAKKPQEEDSPGPSTSSVLKRKSDRKPLRGGGYNPLSGEG 170 S + S + + P++E +P P+T + P +G G +P SG G Sbjct: 17186 SEEGSSSTESSGSHPEQESTPAPTTPT---------PEQGSGSSPASGSG 17064 >gb|AAQX01000500.1| Phytophthora ramorum strain Pr102 Pramorum_Cont500, whole genome shotgun sequence Length = 30739 Score = 27.3 bits (59), Expect = 3.2 Identities = 15/56 (26%), Positives = 29/56 (51%) Frame = -3 Query: 56 RALRQRQLDRAAAAVEPDVVVKRQEALAAARLKMQEELNAQVEKHKEKLKQLEEEK 111 RA ++ +RA + + + ++ ALA +M++ Q+ HKE+ K L+ K Sbjct: 26291 RAFKKSVAERAVLRKKNNTISRKHAALAEQFAEMKDMFLKQLAVHKEQTKLLDTLK 26124 >gb|AAQX01000368.1| Phytophthora ramorum strain Pr102 Pramorum_Cont368, whole genome shotgun sequence Length = 218554 Score = 27.3 bits (59), Expect = 3.2 Identities = 18/50 (36%), Positives = 29/50 (58%) Frame = -2 Query: 90 QEELNAQVEKHKEKLKQLEEEKRRQKIEMWDSMQEGKSYKGNAKKPQEED 139 Q+ N V+K K++ Q E+K++Q E + +E K + AKK QE+D Sbjct: 37980 QKPANKPVKKAKKEKPQ--EKKKKQNEE--EEEEEEKKTQEEAKKAQEQD 37843 Score = 26.9 bits (58), Expect = 4.2 Identities = 18/68 (26%), Positives = 36/68 (52%), Gaps = 3/68 (4%) Frame = -2 Query: 54 RLRALRQRQLDRAAAAVEPDVVVKRQEALAA---ARLKMQEELNAQVEKHKEKLKQLEEE 110 +L A +Q + RAAA +E V + +A+ ++++ + + + ++EEE Sbjct: 29967 QLAAEKQLEAQRAAAFLEHSRVEAGMQVIASWVSGQMQLSKLKKEKAAICASAVHEMEEE 29788 Query: 111 KRRQKIEM 118 KRRQ+ E+ Sbjct: 29787 KRRQREEI 29764 >gb|AAQX01000053.1| Phytophthora ramorum strain Pr102 Pramorum_Cont53, whole genome shotgun sequence Length = 309763 Score = 27.3 bits (59), Expect = 3.2 Identities = 18/60 (30%), Positives = 26/60 (43%), Gaps = 4/60 (6%) Frame = -2 Query: 109 EEKRRQK----IEMWDSMQEGKSYKGNAKKPQEEDSPGPSTSSVLKRKSDRKPLRGGGYN 164 EE++RQ+ +W + K KK ++E +P PS S R R R YN Sbjct: 220737 EERKRQRERKDFSIWAGIPSPPPMK---KKVKKEKTPSPSRSMSRSRSRSRSRSRSRSYN 220567 Score = 26.2 bits (56), Expect = 7.2 Identities = 25/89 (28%), Positives = 37/89 (41%), Gaps = 1/89 (1%) Frame = -2 Query: 86 RLKMQEELNAQVEKHKEKLKQLEEEKRRQKIEMWDSMQEGKSYKGNAK-KPQEEDSPGPS 144 RLK EEL +Q + R I +S++ + ++ +P+ DS S Sbjct: 96810 RLKTMEELRSQDRTSRSPCISRRIRPMRGSISRSNSIKACSTLDSRSEPRPRLGDS---S 96640 Query: 145 TSSVLKRKSDRKPLRGGGYNPLSGEGGGA 173 S L SDR PLR P + + G A Sbjct: 96639 VVSSLTPTSDRYPLRSHSSTPQANDYGTA 96553 >gb|AAQX01000325.1| Phytophthora ramorum strain Pr102 Pramorum_Cont325, whole genome shotgun sequence Length = 240192 Score = 26.9 bits (58), Expect = 4.2 Identities = 20/56 (35%), Positives = 24/56 (42%), Gaps = 2/56 (3%) Frame = -1 Query: 134 KPQEEDSPGPSTSSVLKRKSDRKPLRGGGYNPLSGEGGGACSW--RPGRRGPSSGG 187 K QEE G +R+ R+ RGGG G GGG + R GR GG Sbjct: 125646 KRQEEGDAG-------RRRRWRRRRRGGGGGGGGGGGGGGGRYKLRSGRENDQEGG 125500 >gb|AAQX01000152.1| Phytophthora ramorum strain Pr102 Pramorum_Cont152, whole genome shotgun sequence Length = 144054 Score = 26.9 bits (58), Expect = 4.2 Identities = 22/66 (33%), Positives = 36/66 (54%) Frame = -1 Query: 43 LLYVVFQKLSARLRALRQRQLDRAAAAVEPDVVVKRQEALAAARLKMQEELNAQVEKHKE 102 LL V+ L R+ AL LD AA + DVVV++ +ALA ++ +++L Q Sbjct: 4998 LLVVLLDTLPLRV-ALVVDALD--VAAHDADVVVQQADALAQLLVRHEQDLRVQPLVRAP 4828 Query: 103 KLKQLE 108 L++L+ Sbjct: 4827 DLRRLQ 4810 >gb|AAQX01000559.1| Phytophthora ramorum strain Pr102 Pramorum_Cont559, whole genome shotgun sequence Length = 33123 Score = 26.2 bits (56), Expect = 7.2 Identities = 15/42 (35%), Positives = 16/42 (38%) Frame = +1 Query: 145 TSSVLKRKSDRKPLRGGGYNPLSGEGGGACSWRPGRRGPSSG 186 TSS S R R G +WRPG GPS G Sbjct: 21394 TSSATGSASCRPRTRPRCRTSCRSSGPACATWRPGCHGPSRG 21519 >gb|AAQX01000292.1| Phytophthora ramorum strain Pr102 Pramorum_Cont292, whole genome shotgun sequence Length = 46017 Score = 26.2 bits (56), Expect = 7.2 Identities = 15/61 (24%), Positives = 31/61 (50%) Frame = -3 Query: 78 RQEALAAARLKMQEELNAQVEKHKEKLKQLEEEKRRQKIEMWDSMQEGKSYKGNAKKPQE 137 +++A A + K Q E ++++ +E + EEEKR ++ + + + + NAK Sbjct: 34753 KKKAKAPKKTKEQLEEERRLQEEEEARLRAEEEKRIEEARLKREAEAARRREENAKNRAA 34574 Query: 138 E 138 E Sbjct: 34573 E 34571 >gb|AAQX01000172.1| Phytophthora ramorum strain Pr102 Pramorum_Cont172, whole genome shotgun sequence Length = 39701 Score = 26.2 bits (56), Expect = 7.2 Identities = 22/57 (38%), Positives = 28/57 (49%) Frame = -3 Query: 27 GSLLATYGWYIVFSCILLYVVFQKLSARLRALRQRQLDRAAAAVEPDVVVKRQEALA 83 G+LLA W +V I++ V+F L L AL L VE D VV+R LA Sbjct: 9663 GNLLAVVFWVLVVLFIIIIVIFFLLLTDLEAL--VGLFLFFIIVEVDFVVRRLLFLA 9499 Score = 25.8 bits (55), Expect = 9.4 Identities = 16/61 (26%), Positives = 28/61 (45%) Frame = -3 Query: 109 EEKRRQKIEMWDSMQEGKSYKGNAKKPQEEDSPGPSTSSVLKRKSDRKPLRGGGYNPLSG 168 +E+R+ K + S G++ ++PQE+ P +++ S P PLSG Sbjct: 31209 KERRKHKEKDKSSGSSGQAVSQYQRQPQEDQEPQLASAYEAPGASHYFPAEEDLLTPLSG 31030 Query: 169 E 169 E Sbjct: 31029 E 31027 >gb|AAQX01000170.1| Phytophthora ramorum strain Pr102 Pramorum_Cont170, whole genome shotgun sequence Length = 39891 Score = 26.2 bits (56), Expect = 7.2 Identities = 13/28 (46%), Positives = 14/28 (50%) Frame = -3 Query: 157 PLRGGGYNPLSGEGGGACSWRPGRRGPS 184 P R G P GG CSWRP GP+ Sbjct: 12448 PPRTGRLQP----SGGGCSWRPH*PGPA 12377 >gb|AAQX01000169.1| Phytophthora ramorum strain Pr102 Pramorum_Cont169, whole genome shotgun sequence Length = 22880 Score = 26.2 bits (56), Expect = 7.2 Identities = 12/28 (42%), Positives = 15/28 (53%) Frame = -1 Query: 90 QEELNAQVEKHKEKLKQLEEEKRRQKIE 117 QEE E+H+ K EE +R QK E Sbjct: 4112 QEEHRKNTEEHRRTQKNTEEHRRTQKNE 4029 >gb|AAQX01000509.1| Phytophthora ramorum strain Pr102 Pramorum_Cont509, whole genome shotgun sequence Length = 79092 Score = 25.8 bits (55), Expect = 9.4 Identities = 21/64 (32%), Positives = 30/64 (46%), Gaps = 3/64 (4%) Frame = +1 Query: 118 MWDSMQEGKSYKGNAKKPQEEDSPGPSTSSVLKRKSDRKP---LRGGGYNPLSGEGGGAC 174 M DS + + + P E+ P S +L +S RK LRGG + P+S + G A Sbjct: 18202 MLDSRKRAANSSDSYGTPLED--PTMYVSCLLVPRSSRKSATSLRGGQWKPMSSK*GTAS 18375 Query: 175 SWRP 178 S P Sbjct: 18376 SRLP 18387 >gb|AAQX01000372.1| Phytophthora ramorum strain Pr102 Pramorum_Cont372, whole genome shotgun sequence Length = 24539 Score = 25.8 bits (55), Expect = 9.4 Identities = 15/45 (33%), Positives = 21/45 (46%) Frame = -2 Query: 63 LDRAAAAVEPDVVVKRQEALAAARLKMQEELNAQVEKHKEKLKQL 107 L+ +AVE V QEA+A + EE A E ++QL Sbjct: 7501 LEDLVSAVESGVAAAEQEAVAEPTVTAAEEFEAPTAATDEHVQQL 7367 >gb|AAQX01000186.1| Phytophthora ramorum strain Pr102 Pramorum_Cont186, whole genome shotgun sequence Length = 28285 Score = 25.8 bits (55), Expect = 9.4 Identities = 15/64 (23%), Positives = 30/64 (46%) Frame = -1 Query: 96 QVEKHKEKLKQLEEEKRRQKIEMWDSMQEGKSYKGNAKKPQEEDSPGPSTSSVLKRKSDR 155 QV K +++ L + Q + + E K + +KKP ED+P +L+ + D+ Sbjct: 2566 QVNKIRKQHDDLRHRVQSQTALLEELKDEVKDLELESKKPSLEDTPETRKIRMLENRLDK 2387 Query: 156 KPLR 159 ++ Sbjct: 2386 AMIK 2375 >gb|AAQX01000136.1| Phytophthora ramorum strain Pr102 Pramorum_Cont136, whole genome shotgun sequence Length = 98943 Score = 25.8 bits (55), Expect = 9.4 Identities = 22/91 (24%), Positives = 37/91 (40%) Frame = +1 Query: 96 QVEKHKEKLKQLEEEKRRQKIEMWDSMQEGKSYKGNAKKPQEEDSPGPSTSSVLKRKSDR 155 Q ++H+ +L L E +S+Q K + + + D PGP +R+ R Sbjct: 79471 QCKRHQTELDGLAAETAPP-----ESVQPTVPLKAHQVRSWKHDDPGPDRRDRDQRRRKR 79635 Query: 156 KPLRGGGYNPLSGEGGGACSWRPGRRGPSSG 186 L GG++ + + G S R G G Sbjct: 79636 HGLHDGGHDHV--QPGDKHSSAKDRHGAGDG 79722 >gb|AAQX01000072.1| Phytophthora ramorum strain Pr102 Pramorum_Cont72, whole genome shotgun sequence Length = 85614 Score = 25.8 bits (55), Expect = 9.4 Identities = 9/11 (81%), Positives = 10/11 (90%) Frame = -2 Query: 172 GACSWRPGRRG 182 G+CSWR GRRG Sbjct: 57125 GSCSWRCGRRG 57093 >gb|AAQX01000017.1| Phytophthora ramorum strain Pr102 Pramorum_Cont17, whole genome shotgun sequence Length = 43761 Score = 25.8 bits (55), Expect = 9.4 Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 2/63 (3%) Frame = -2 Query: 62 QLDRAAAAVEPDVVVKRQEALAAARLK--MQEELNAQVEKHKEKLKQLEEEKRRQKIEMW 119 Q+D+ AAA E +KR+ A+ + E+ A+ E+ + LKQ +R+ W Sbjct: 13412 QIDKRAAAAETRKSLKRKSVAVTAKDEEASAEDGKAEAEEKEPPLKQ----RRKSAAAEW 13245 Query: 120 DSM 122 M Sbjct: 13244 SEM 13236 Database: genome.fa Posted date: Jan 19, 2010 5:07 PM Number of letters in database: 14,903,514 Number of sequences in database: 572 Lambda K H 0.316 0.132 0.384 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 3,366,347 Number of Sequences: 572 Number of extensions: 51483 Number of successful extensions: 631 Number of sequences better than 10.0: 45 Number of HSP's better than 10.0 without gapping: 127 Number of HSP's successfully gapped in prelim test: 51 Number of HSP's that attempted gapping in prelim test: 365 Number of HSP's gapped (non-prelim): 416 length of query: 189 length of database: 4,967,838 effective HSP length: 89 effective length of query: 100 effective length of database: 4,916,930 effective search space: 491693000 effective search space used: 491693000 frameshift window, decay const: 40, 0.1 T: 13 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 55 (25.8 bits)