TBLASTN 2.2.13 [Nov-27-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= (189 letters) Database: genome.fa 306 sequences; 11,192,215 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AACB02000003.1| Giardia lamblia ATCC 50803 strain WB C6 ctg02... 35 0.009 gb|AACB02000056.1| Giardia lamblia ATCC 50803 strain WB C6 ctg02... 33 0.035 gb|AACB02000026.1| Giardia lamblia ATCC 50803 strain WB C6 ctg02... 33 0.035 gb|AACB02000021.1| Giardia lamblia ATCC 50803 strain WB C6 ctg02... 33 0.035 gb|AACB02000010.1| Giardia lamblia ATCC 50803 strain WB C6 ctg02... 31 0.17 gb|AACB02000012.1| Giardia lamblia ATCC 50803 strain WB C6 ctg02... 30 0.29 gb|AACB02000033.1| Giardia lamblia ATCC 50803 strain WB C6 ctg02... 30 0.38 gb|AACB02000002.1| Giardia lamblia ATCC 50803 strain WB C6 ctg02... 30 0.50 gb|AACB02000028.1| Giardia lamblia ATCC 50803 strain WB C6 ctg02... 29 0.85 gb|AACB02000018.1| Giardia lamblia ATCC 50803 strain WB C6 ctg02... 28 1.9 gb|AACB02000155.1| Giardia lamblia ATCC 50803 strain WB C6 ctg02... 27 2.5 gb|AACB02000151.1| Giardia lamblia ATCC 50803 strain WB C6 ctg02... 27 2.5 gb|AACB02000048.1| Giardia lamblia ATCC 50803 strain WB C6 ctg02... 27 3.2 gb|AACB02000013.1| Giardia lamblia ATCC 50803 strain WB C6 ctg02... 27 3.2 gb|AACB02000005.1| Giardia lamblia ATCC 50803 strain WB C6 ctg02... 27 3.2 gb|AACB02000055.1| Giardia lamblia ATCC 50803 strain WB C6 ctg02... 27 4.2 gb|AACB02000038.1| Giardia lamblia ATCC 50803 strain WB C6 ctg02... 27 4.2 gb|AACB02000078.1| Giardia lamblia ATCC 50803 strain WB C6 ctg02... 26 5.5 gb|AACB02000001.1| Giardia lamblia ATCC 50803 strain WB C6 ctg02... 26 5.5 gb|AACB02000069.1| Giardia lamblia ATCC 50803 strain WB C6 ctg02... 26 7.2 gb|AACB02000027.1| Giardia lamblia ATCC 50803 strain WB C6 ctg02... 26 7.2 gb|AACB02000014.1| Giardia lamblia ATCC 50803 strain WB C6 ctg02... 26 7.2 gb|AACB02000164.1| Giardia lamblia ATCC 50803 strain WB C6 ctg02... 25 9.4 gb|AACB02000051.1| Giardia lamblia ATCC 50803 strain WB C6 ctg02... 25 9.4 >gb|AACB02000003.1| Giardia lamblia ATCC 50803 strain WB C6 ctg02_3, whole genome shotgun sequence Length = 483138 Score = 35.4 bits (80), Expect = 0.009 Identities = 22/67 (32%), Positives = 38/67 (56%), Gaps = 2/67 (2%) Frame = +2 Query: 53 ARLRALRQRQLDRAAAAVEPDVVVKRQEALAAA-RLKMQEELNAQVEKHKEK-LKQLEEE 110 ++L A Q + R + +V+ +R + LA R+++QEE VEK +EK K + E+ Sbjct: 61280 SKLYAEAQAKTRRLEEEIREEVIAQRAKELAERQRIRIQEEARLLVEKEREKTAKVIAEQ 61459 Query: 111 KRRQKIE 117 K R ++E Sbjct: 61460 KERYRME 61480 Score = 26.9 bits (58), Expect = 3.2 Identities = 25/88 (28%), Positives = 48/88 (54%), Gaps = 4/88 (4%) Frame = -2 Query: 67 AAAVEPDVVVKRQEALAAARLKMQEEL---NAQVEKHKEKLKQLEEEKRRQKIEMWDSMQ 123 A+ ++ D+V + + A R+++ ++ NAQ + HK+++++L R+KI +MQ Sbjct: 285818 ASRLDHDLVDELTKENMALRIELDNQISIANAQNKTHKQEVRKL-----REKI---SAMQ 285663 Query: 124 EGKSYKGNAKKPQ-EEDSPGPSTSSVLK 150 S + N KPQ +E S P S + + Sbjct: 285662 SQASQEEN--KPQFKEASTTPQASGLFE 285585 Score = 25.4 bits (54), Expect = 9.4 Identities = 20/73 (27%), Positives = 33/73 (45%) Frame = +1 Query: 49 QKLSARLRALRQRQLDRAAAAVEPDVVVKRQEALAAARLKMQEELNAQVEKHKEKLKQLE 108 Q+L L ALR+ + AAA ++ AAA + + AQ+E E+L +L Sbjct: 268825 QQLQQELAALRRDAAENAAA-------LREAREQAAAHQEDAQLKAAQLEDLSEELARLR 268983 Query: 109 EEKRRQKIEMWDS 121 E+ + D+ Sbjct: 268984 EQAAEDAVRARDA 269022 Score = 25.4 bits (54), Expect = 9.4 Identities = 20/73 (27%), Positives = 33/73 (45%) Frame = +1 Query: 49 QKLSARLRALRQRQLDRAAAAVEPDVVVKRQEALAAARLKMQEELNAQVEKHKEKLKQLE 108 Q+L L ALR+ + AAA ++ AAA + + AQ+E E+L +L Sbjct: 270334 QQLQQELAALRRDAAENAAA-------LREAREQAAAHQEDAQLKAAQLEDLSEELARLR 270492 Query: 109 EEKRRQKIEMWDS 121 E+ + D+ Sbjct: 270493 EQAAEDAVRARDA 270531 >gb|AACB02000056.1| Giardia lamblia ATCC 50803 strain WB C6 ctg02_56, whole genome shotgun sequence Length = 60917 Score = 33.5 bits (75), Expect = 0.035 Identities = 24/53 (45%), Positives = 27/53 (50%), Gaps = 3/53 (5%) Frame = +3 Query: 134 KPQEEDSPGPSTSSV---LKRKSDRKPLRGGGYNPLSGEGGGACSWRPGRRGP 183 +P S GPS L+R + R P R GG P G GGG RPGRRGP Sbjct: 870 RPPGP*SAGPSRPQAPRPLRRGAPRGPRR*GGA-PAPGRGGGR--GRPGRRGP 1019 Score = 26.2 bits (56), Expect = 5.5 Identities = 11/42 (26%), Positives = 22/42 (52%) Frame = -3 Query: 32 TYGWYIVFSCILLYVVFQKLSARLRALRQRQLDRAAAAVEPD 73 +Y WYI +C++LY + + LR + R+ + + P+ Sbjct: 42732 SYSWYIYLTCVILYNIDGRRFKSLRLKY*GWIGRSVSMLIPE 42607 >gb|AACB02000026.1| Giardia lamblia ATCC 50803 strain WB C6 ctg02_26, whole genome shotgun sequence Length = 155861 Score = 33.5 bits (75), Expect = 0.035 Identities = 24/53 (45%), Positives = 27/53 (50%), Gaps = 3/53 (5%) Frame = +3 Query: 134 KPQEEDSPGPSTSSV---LKRKSDRKPLRGGGYNPLSGEGGGACSWRPGRRGP 183 +P S GPS L+R + R P R GG P G GGG RPGRRGP Sbjct: 118152 RPPGP*SAGPSRPQAPRPLRRGAPRGPRR*GGA-PAPGRGGGR--GRPGRRGP 118301 Score = 26.9 bits (58), Expect = 3.2 Identities = 19/60 (31%), Positives = 23/60 (38%), Gaps = 8/60 (13%) Frame = +3 Query: 133 KKPQEEDSPGPS--TSSVLKRKSDRKPLR------GGGYNPLSGEGGGACSWRPGRRGPS 184 + P + GPS T + R+ R R G PLS G CS P R G S Sbjct: 154059 RPPPQRTRAGPSSGTGAPQTRRPSRSAARRTSGSSAGRRTPLSASTGSGCSRTPSRSGAS 154238 >gb|AACB02000021.1| Giardia lamblia ATCC 50803 strain WB C6 ctg02_21, whole genome shotgun sequence Length = 178254 Score = 33.5 bits (75), Expect = 0.035 Identities = 24/53 (45%), Positives = 27/53 (50%), Gaps = 3/53 (5%) Frame = +1 Query: 134 KPQEEDSPGPSTSSV---LKRKSDRKPLRGGGYNPLSGEGGGACSWRPGRRGP 183 +P S GPS L+R + R P R GG P G GGG RPGRRGP Sbjct: 165715 RPPGP*SAGPSRPQAPRPLRRGAPRGPRR*GGA-PAPGRGGGR--GRPGRRGP 165864 Score = 26.2 bits (56), Expect = 5.5 Identities = 15/42 (35%), Positives = 21/42 (50%) Frame = -1 Query: 136 QEEDSPGPSTSSVLKRKSDRKPLRGGGYNPLSGEGGGACSWR 177 QE S GP + ++R S+ L NP GG+CS+R Sbjct: 116601 QEMLSTGPRAPNNIRRASEL--LIRAAINPFLARDGGSCSYR 116482 >gb|AACB02000010.1| Giardia lamblia ATCC 50803 strain WB C6 ctg02_10, whole genome shotgun sequence Length = 274062 Score = 31.2 bits (69), Expect = 0.17 Identities = 23/84 (27%), Positives = 41/84 (48%), Gaps = 3/84 (3%) Frame = -2 Query: 59 RQRQLDRAAAAVEP-DVVVKRQEALAAARLKMQEELNAQ--VEKHKEKLKQLEEEKRRQK 115 ++RQ D A +EP K+ E +A + ++ + + EKHKEK K+ +K ++K Sbjct: 52058 QERQDDAMPAPLEPLSSAAKKDEPVAPIEVDAEDTNDTKDAKEKHKEKSKEKHRDKDKEK 51879 Query: 116 IEMWDSMQEGKSYKGNAKKPQEED 139 E ++ K + K +E D Sbjct: 51878 -EKHKEKEKDKEKHRDKDKDKERD 51810 >gb|AACB02000012.1| Giardia lamblia ATCC 50803 strain WB C6 ctg02_12, whole genome shotgun sequence Length = 268442 Score = 30.4 bits (67), Expect = 0.29 Identities = 21/69 (30%), Positives = 34/69 (49%) Frame = -3 Query: 49 QKLSARLRALRQRQLDRAAAAVEPDVVVKRQEALAAARLKMQEELNAQVEKHKEKLKQLE 108 Q+ AR+ L ++Q + K ++ + A +E++ A+ E HK KQLE Sbjct: 167136 QREIARIAELEKQQRIEEEKRRYKEKKEKERKEMEAKEAAKREQIQARQEAHK---KQLE 166966 Query: 109 EEKRRQKIE 117 EE RR+ E Sbjct: 166965 EEARRRNQE 166939 Score = 29.3 bits (64), Expect = 0.65 Identities = 26/90 (28%), Positives = 42/90 (46%), Gaps = 8/90 (8%) Frame = -3 Query: 55 LRALRQRQLDRAAAAVEPDVVVKRQEALAA--------ARLKMQEELNAQVEKHKEKLKQ 106 L A+++RQ A E + ++++E A A K QE+ EK ++ Sbjct: 167271 LEAMQKRQAREAQHKAEMEERMRQKEERAKLAEEAKFKAMAKQQEQREIARIAELEKQQR 167092 Query: 107 LEEEKRRQKIEMWDSMQEGKSYKGNAKKPQ 136 +EEEKRR K E + ++ K AK+ Q Sbjct: 167091 IEEEKRRYK-EKKEKERKEMEAKEAAKREQ 167005 >gb|AACB02000033.1| Giardia lamblia ATCC 50803 strain WB C6 ctg02_33, whole genome shotgun sequence Length = 96597 Score = 30.0 bits (66), Expect = 0.38 Identities = 15/48 (31%), Positives = 27/48 (56%) Frame = -3 Query: 77 KRQEALAAARLKMQEELNAQVEKHKEKLKQLEEEKRRQKIEMWDSMQE 124 K QEALAA + + QE++N+ + +++ +L E+ + E S E Sbjct: 8284 KHQEALAALKKEHQEKINSLISEYEGRLTSANEQLAQAMAEAEKSRNE 8141 >gb|AACB02000002.1| Giardia lamblia ATCC 50803 strain WB C6 ctg02_2, whole genome shotgun sequence Length = 647811 Score = 29.6 bits (65), Expect = 0.50 Identities = 28/132 (21%), Positives = 51/132 (38%) Frame = +2 Query: 41 CILLYVVFQKLSARLRALRQRQLDRAAAAVEPDVVVKRQEALAAARLKMQEELNAQVEKH 100 C++ QKL+ RL A D++ A + V K QE +++ E+ + + Sbjct: 576104 CVINAETIQKLTTRLAA-----ADKSVAQLNHLVSEKEQEI-----QRLKGEVAEHIARQ 576253 Query: 101 KEKLKQLEEEKRRQKIEMWDSMQEGKSYKGNAKKPQEEDSPGPSTSSVLKRKSDRKPLRG 160 E + + + DS + G ++ G +K+ P+ SSV + PL Sbjct: 576254 TELIASQSKICMAKTASKSDSARPGSAFSGRSKRASSATVFVPARSSVATTRPMPTPLAN 576433 Query: 161 GGYNPLSGEGGG 172 + GG Sbjct: 576434 IATMAAKAQAGG 576469 Score = 27.3 bits (59), Expect = 2.5 Identities = 23/68 (33%), Positives = 32/68 (47%), Gaps = 10/68 (14%) Frame = -1 Query: 51 LSARLRALRQRQLD------RAAAAVEPDVVVKRQEALAA----ARLKMQEELNAQVEKH 100 + ARLRA + D AA A E + + ++ AA AR NAQVE Sbjct: 51105 IQARLRATENKSSDYEKRAKEAAEAAEYSMRIMEEKLAAANAAAARAFNAAPQNAQVESL 50926 Query: 101 KEKLKQLE 108 ++KLK+ E Sbjct: 50925 QKKLKEKE 50902 Score = 26.2 bits (56), Expect = 5.5 Identities = 21/72 (29%), Positives = 29/72 (40%), Gaps = 8/72 (11%) Frame = +1 Query: 122 MQEGKSYKGNAKKPQEEDSPGPSTSSVLKRKSDRKPLR------GGGYNPLSGEGGGACS 175 ++ +S + +PQ +PG S + + R R LR G G GG A S Sbjct: 166609 LRAARSSPESTPRPQPSPTPGSSPAGLRSRSLTRSSLRPSGAPTGRSQGSSGGSGGQAPS 166788 Query: 176 WR--PGRRGPSS 185 R G PSS Sbjct: 166789 LRTASGSSRPSS 166824 Score = 25.8 bits (55), Expect = 7.2 Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 6/58 (10%) Frame = -2 Query: 7 SLSARPALETEGLRFLHTTVGSL------LATYGWYIVFSCILLYVVFQKLSARLRAL 58 +++ R EG+ LHT V ++ LA G +I CILLY V + + L AL Sbjct: 487607 NITGRHC*GVEGIGGLHTLVVTINQQNIVLANKGLHIRVECILLYRVQRSIVWLLWAL 487434 >gb|AACB02000028.1| Giardia lamblia ATCC 50803 strain WB C6 ctg02_28, whole genome shotgun sequence Length = 143950 Score = 28.9 bits (63), Expect = 0.85 Identities = 25/81 (30%), Positives = 41/81 (50%), Gaps = 11/81 (13%) Frame = -2 Query: 49 QKLSARLRALRQ-----RQLDRAAAAVEPDVVVKRQEALAAA------RLKMQEELNAQV 97 +KL+A+ +R+ Q D A+ E DV V Q AL A + + EEL + Sbjct: 30435 KKLAAKDAEIRRLMSAASQPDEASHGTEYDVAVL-QSALTVADDIINDKTRETEELQKLL 30259 Query: 98 EKHKEKLKQLEEEKRRQKIEM 118 + +EKL+ ++E K + I+M Sbjct: 30258 DDLQEKLRDVDENKLYETIDM 30196 >gb|AACB02000018.1| Giardia lamblia ATCC 50803 strain WB C6 ctg02_18, whole genome shotgun sequence Length = 202859 Score = 27.7 bits (60), Expect = 1.9 Identities = 26/115 (22%), Positives = 54/115 (46%), Gaps = 8/115 (6%) Frame = -1 Query: 50 KLSARLRALRQ------RQLDRAAAAVEPDVVVKRQEALAAA--RLKMQEELNAQVEKHK 101 ++SA L L+Q R+ + A + D+V + EA A R K+ +LNA++ + + Sbjct: 137696 RVSADLATLQQTFTQSTRKKNEEATKLAQDIVENKLEAAQALEERNKIITQLNARITELE 137517 Query: 102 EKLKQLEEEKRRQKIEMWDSMQEGKSYKGNAKKPQEEDSPGPSTSSVLKRKSDRK 156 +LKQ + ++M + ++ +++K E+++ S + S K Sbjct: 137516 LELKQRPLAREYTTVDMTITQKQRPLSAIDSRKTHEDEANSIRFSKSVAGSSSNK 137352 >gb|AACB02000155.1| Giardia lamblia ATCC 50803 strain WB C6 ctg02_155, whole genome shotgun sequence Length = 1463 Score = 27.3 bits (59), Expect = 2.5 Identities = 16/51 (31%), Positives = 19/51 (37%), Gaps = 2/51 (3%) Frame = +1 Query: 128 YKGNAKKPQEEDSPGPST--SSVLKRKSDRKPLRGGGYNPLSGEGGGACSW 176 + G P E P S+ S R +RG G E GG CSW Sbjct: 451 FSGRVGAPYTEGGVHPPA*AESLTALPSRRSAMRGSGMIDSPSECGGGCSW 603 >gb|AACB02000151.1| Giardia lamblia ATCC 50803 strain WB C6 ctg02_151, whole genome shotgun sequence Length = 1494 Score = 27.3 bits (59), Expect = 2.5 Identities = 16/51 (31%), Positives = 19/51 (37%), Gaps = 2/51 (3%) Frame = -1 Query: 128 YKGNAKKPQEEDSPGPST--SSVLKRKSDRKPLRGGGYNPLSGEGGGACSW 176 + G P E P S+ S R +RG G E GG CSW Sbjct: 1008 FSGRVGAPYTEGGVHPPA*AESLTALPSRRSAMRGSGMIDSPSECGGGCSW 856 >gb|AACB02000048.1| Giardia lamblia ATCC 50803 strain WB C6 ctg02_48, whole genome shotgun sequence Length = 72711 Score = 26.9 bits (58), Expect = 3.2 Identities = 19/70 (27%), Positives = 36/70 (51%) Frame = +1 Query: 77 KRQEALAAARLKMQEELNAQVEKHKEKLKQLEEEKRRQKIEMWDSMQEGKSYKGNAKKPQ 136 +R+EA+ R ++ E ++ E+ + KLKQ E+ + Q+ + +S+Q+ A K Sbjct: 23122 ERREAMDMLRARIAE---SRQEEEERKLKQ-EQIRAEQRAKEQESVQQAAEEVSKAAKRS 23289 Query: 137 EEDSPGPSTS 146 ED +S Sbjct: 23290 WEDDADSDSS 23319 >gb|AACB02000013.1| Giardia lamblia ATCC 50803 strain WB C6 ctg02_13, whole genome shotgun sequence Length = 266103 Score = 26.9 bits (58), Expect = 3.2 Identities = 15/37 (40%), Positives = 17/37 (45%), Gaps = 1/37 (2%) Frame = -3 Query: 143 PSTSSVLKRKSDRKPLRGGGYNPLSGE-GGGACSWRP 178 P SS S +P GG +P G GAC WRP Sbjct: 109090 PGGSSARGGGSSTRPGSGGTSSPCRGGCARGACGWRP 108980 >gb|AACB02000005.1| Giardia lamblia ATCC 50803 strain WB C6 ctg02_5, whole genome shotgun sequence Length = 343211 Score = 26.9 bits (58), Expect = 3.2 Identities = 23/80 (28%), Positives = 32/80 (40%), Gaps = 8/80 (10%) Frame = +3 Query: 71 EPDVVVKRQEALAAARLKMQE--------ELNAQVEKHKEKLKQLEEEKRRQKIEMWDSM 122 + D + R+ A AA R +Q+ + QVE+ K +L L E SM Sbjct: 208437 QTDYTLIREFAKAAPRTTLQQYTDIEADIRIRKQVEQTKVELTTLSAEANSYCSPTTISM 208616 Query: 123 QEGKSYKGNAKKPQEEDSPG 142 Q + KK E D PG Sbjct: 208617 QNSAATPTVIKKQLEPDDPG 208676 Score = 25.4 bits (54), Expect = 9.4 Identities = 10/29 (34%), Positives = 17/29 (58%) Frame = +3 Query: 20 RFLHTTVGSLLATYGWYIVFSCILLYVVF 48 R L + S + Y ++IVF+C L ++F Sbjct: 250281 RILKASTSSTMPIYIYFIVFACFLGSIIF 250367 >gb|AACB02000055.1| Giardia lamblia ATCC 50803 strain WB C6 ctg02_55, whole genome shotgun sequence Length = 61242 Score = 26.6 bits (57), Expect = 4.2 Identities = 11/25 (44%), Positives = 17/25 (68%), Gaps = 2/25 (8%) Frame = +1 Query: 143 PSTSSVLKRKSDRKPLRG--GGYNP 165 PST S+ +K++R+P +G G Y P Sbjct: 59980 PSTGSIASKKAERRPPQGLQGAYRP 60054 >gb|AACB02000038.1| Giardia lamblia ATCC 50803 strain WB C6 ctg02_38, whole genome shotgun sequence Length = 86414 Score = 26.6 bits (57), Expect = 4.2 Identities = 11/34 (32%), Positives = 21/34 (61%) Frame = -1 Query: 80 EALAAARLKMQEELNAQVEKHKEKLKQLEEEKRR 113 E L ++EEL ++EK ++ K+L+E +R+ Sbjct: 50720 EELRKENAAVEEELRMEIEKTRQFAKELDEYRRK 50619 >gb|AACB02000078.1| Giardia lamblia ATCC 50803 strain WB C6 ctg02_78, whole genome shotgun sequence Length = 7481 Score = 26.2 bits (56), Expect = 5.5 Identities = 21/71 (29%), Positives = 28/71 (39%), Gaps = 4/71 (5%) Frame = +1 Query: 121 SMQEGKS----YKGNAKKPQEEDSPGPSTSSVLKRKSDRKPLRGGGYNPLSGEGGGACSW 176 S+QEG + G + +S PST + D + L G + LSGE G Sbjct: 4615 SLQEGSPAWLRHAGPIMVQRPSESLEPSTPQATRTSGDPEALAGLLRSLLSGESAGPQDG 4794 Query: 177 RPGRRGPSSGG 187 R R P G Sbjct: 4795 RAPFRAPGCRG 4827 >gb|AACB02000001.1| Giardia lamblia ATCC 50803 strain WB C6 ctg02_1, whole genome shotgun sequence Length = 870956 Score = 26.2 bits (56), Expect = 5.5 Identities = 18/56 (32%), Positives = 27/56 (48%) Frame = +3 Query: 44 LYVVFQKLSARLRALRQRQLDRAAAAVEPDVVVKRQEALAAARLKMQEELNAQVEK 99 LY + +S ALR + D AAA+E V + E + A + + EL A + K Sbjct: 720876 LYGLLDPVSRARAALRSGKADELAAALE-SVGLADMEPFSIASMSLSAELQAVIMK 721040 Score = 25.4 bits (54), Expect = 9.4 Identities = 19/53 (35%), Positives = 24/53 (45%) Frame = +2 Query: 131 NAKKPQEEDSPGPSTSSVLKRKSDRKPLRGGGYNPLSGEGGGACSWRPGRRGP 183 N + P PG + S++ S+R P R LS EG G C GRR P Sbjct: 437498 NTRAPLSCSRPGGARSALA---SNRGPSRW-----LSPEGPGTCRTLQGRRRP 437632 Score = 25.4 bits (54), Expect = 9.4 Identities = 8/27 (29%), Positives = 17/27 (62%) Frame = +3 Query: 131 NAKKPQEEDSPGPSTSSVLKRKSDRKP 157 ++ +P E++PGP + L+ + R+P Sbjct: 536808 SSSRPSSEEAPGPKVKNPLETQQRREP 536888 >gb|AACB02000069.1| Giardia lamblia ATCC 50803 strain WB C6 ctg02_69, whole genome shotgun sequence Length = 35240 Score = 25.8 bits (55), Expect = 7.2 Identities = 11/24 (45%), Positives = 12/24 (50%) Frame = +1 Query: 153 SDRKPLRGGGYNPLSGEGGGACSW 176 S R +RG G E GG CSW Sbjct: 304 SRRSAMRGSGMIDSPSECGGGCSW 375 >gb|AACB02000027.1| Giardia lamblia ATCC 50803 strain WB C6 ctg02_27, whole genome shotgun sequence Length = 148504 Score = 25.8 bits (55), Expect = 7.2 Identities = 11/24 (45%), Positives = 12/24 (50%) Frame = +3 Query: 153 SDRKPLRGGGYNPLSGEGGGACSW 176 S R +RG G E GG CSW Sbjct: 2220 SRRSAMRGSGMIDSPSECGGGCSW 2291 >gb|AACB02000014.1| Giardia lamblia ATCC 50803 strain WB C6 ctg02_14, whole genome shotgun sequence Length = 237218 Score = 25.8 bits (55), Expect = 7.2 Identities = 18/60 (30%), Positives = 25/60 (41%), Gaps = 8/60 (13%) Frame = +3 Query: 129 KGNAKKPQEEDSPGPSTSSVLKRKSDRKPLRGG--------GYNPLSGEGGGACSWRPGR 180 +G ++ + GPS S +R R+ RGG G +P S G WR GR Sbjct: 26052 RGRRRRARRPPCSGPSPSCSRRRTGRRRSCRGGRSARRGLRGQSP-SCPARGPRGWRGGR 26228 Score = 25.8 bits (55), Expect = 7.2 Identities = 18/60 (30%), Positives = 25/60 (41%), Gaps = 8/60 (13%) Frame = -3 Query: 129 KGNAKKPQEEDSPGPSTSSVLKRKSDRKPLRGG--------GYNPLSGEGGGACSWRPGR 180 +G ++ + GPS S +R R+ RGG G +P S G WR GR Sbjct: 51345 RGRRRRARRPPCSGPSPSCSRRRTGRRRSCRGGRSARRGLRGQSP-SCPARGPRGWRGGR 51169 Score = 25.8 bits (55), Expect = 7.2 Identities = 18/60 (30%), Positives = 25/60 (41%), Gaps = 8/60 (13%) Frame = -3 Query: 129 KGNAKKPQEEDSPGPSTSSVLKRKSDRKPLRGG--------GYNPLSGEGGGACSWRPGR 180 +G ++ + GPS S +R R+ RGG G +P S G WR GR Sbjct: 30048 RGRRRRARRPPCSGPSPSCSRRRTGRRRSCRGGRSARRGLRGQSP-SCPARGPRGWRGGR 29872 >gb|AACB02000164.1| Giardia lamblia ATCC 50803 strain WB C6 ctg02_164, whole genome shotgun sequence Length = 1424 Score = 25.4 bits (54), Expect = 9.4 Identities = 19/53 (35%), Positives = 24/53 (45%) Frame = +3 Query: 131 NAKKPQEEDSPGPSTSSVLKRKSDRKPLRGGGYNPLSGEGGGACSWRPGRRGP 183 N + P PG + S++ S+R P R LS EG G C GRR P Sbjct: 1044 NTRAPLSCSRPGGARSALA---SNRGPSRW-----LSPEGPGTCRTLQGRRRP 1178 >gb|AACB02000051.1| Giardia lamblia ATCC 50803 strain WB C6 ctg02_51, whole genome shotgun sequence Length = 64390 Score = 25.4 bits (54), Expect = 9.4 Identities = 14/45 (31%), Positives = 22/45 (48%) Frame = -3 Query: 121 SMQEGKSYKGNAKKPQEEDSPGPSTSSVLKRKSDRKPLRGGGYNP 165 +++ KS G ED+P S+ SV K+K+ L+ Y P Sbjct: 49295 TIEPDKSALGLTAYSLSEDAPKSSSDSVEKKKAHINRLQNSRYKP 49161 Database: genome.fa Posted date: Jan 19, 2010 5:05 PM Number of letters in database: 11,192,215 Number of sequences in database: 306 Lambda K H 0.316 0.132 0.384 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 2,345,756 Number of Sequences: 306 Number of extensions: 34440 Number of successful extensions: 358 Number of sequences better than 10.0: 24 Number of HSP's better than 10.0 without gapping: 59 Number of HSP's successfully gapped in prelim test: 17 Number of HSP's that attempted gapping in prelim test: 202 Number of HSP's gapped (non-prelim): 251 length of query: 189 length of database: 3,730,738 effective HSP length: 87 effective length of query: 102 effective length of database: 3,704,116 effective search space: 377819832 effective search space used: 377819832 frameshift window, decay const: 40, 0.1 T: 13 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 54 (25.4 bits)