TBLASTN 2.2.13 [Nov-27-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= sel1 selenoprotein1 [Plasmodium falciparum 3D7]; partially from
XP_001348206.1 # QUERY
         (116 letters)

Database: genome.fa 
           2172 sequences; 20,771,095 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAFB02000037.1| Entamoeba histolytica HM-1:IMSS gcontig_11047...    30   0.23 
gb|AAFB02000276.1| Entamoeba histolytica HM-1:IMSS gcontig_11047...    30   0.29 
gb|AAFB02000013.1| Entamoeba histolytica HM-1:IMSS gcontig_11047...    30   0.29 
gb|AAFB02000255.1| Entamoeba histolytica HM-1:IMSS gcontig_11047...    29   0.38 
gb|AAFB02000056.1| Entamoeba histolytica HM-1:IMSS gcontig_11047...    29   0.38 
gb|AAFB02000526.1| Entamoeba histolytica HM-1:IMSS gcontig_11047...    28   0.66 
gb|AAFB02000102.1| Entamoeba histolytica HM-1:IMSS gcontig_11047...    28   0.86 
gb|AAFB02000285.1| Entamoeba histolytica HM-1:IMSS gcontig_11047...    28   1.1  
gb|AAFB02000277.1| Entamoeba histolytica HM-1:IMSS gcontig_11047...    28   1.1  
gb|AAFB02000185.1| Entamoeba histolytica HM-1:IMSS gcontig_11047...    28   1.1  
gb|AAFB02000107.1| Entamoeba histolytica HM-1:IMSS gcontig_11047...    28   1.1  
gb|AAFB02000581.1| Entamoeba histolytica HM-1:IMSS gcontig_11047...    27   1.5  
gb|AAFB02000047.1| Entamoeba histolytica HM-1:IMSS gcontig_11047...    27   1.5  
gb|AAFB02000018.1| Entamoeba histolytica HM-1:IMSS gcontig_11047...    27   1.5  
gb|AAFB02000233.1| Entamoeba histolytica HM-1:IMSS gcontig_11047...    27   1.9  
gb|AAFB02000147.1| Entamoeba histolytica HM-1:IMSS gcontig_11047...    27   1.9  
gb|AAFB02000472.1| Entamoeba histolytica HM-1:IMSS gcontig_11047...    27   2.5  
gb|AAFB02000420.1| Entamoeba histolytica HM-1:IMSS gcontig_11047...    27   2.5  
gb|AAFB02000256.1| Entamoeba histolytica HM-1:IMSS gcontig_11047...    27   2.5  
gb|AAFB02000539.1| Entamoeba histolytica HM-1:IMSS gcontig_11047...    26   3.3  
gb|AAFB02000339.1| Entamoeba histolytica HM-1:IMSS gcontig_11047...    26   3.3  
gb|AAFB02000269.1| Entamoeba histolytica HM-1:IMSS gcontig_11047...    26   3.3  
gb|AAFB02000178.1| Entamoeba histolytica HM-1:IMSS gcontig_11047...    26   3.3  
gb|AAFB02000141.1| Entamoeba histolytica HM-1:IMSS gcontig_11047...    26   3.3  
gb|AAFB02000040.1| Entamoeba histolytica HM-1:IMSS gcontig_11047...    26   3.3  
gb|AAFB02000016.1| Entamoeba histolytica HM-1:IMSS gcontig_11047...    26   3.3  
gb|AAFB02001182.1| Entamoeba histolytica HM-1:IMSS gcontig_11047...    26   4.2  
gb|AAFB02000599.1| Entamoeba histolytica HM-1:IMSS gcontig_11047...    26   4.2  
gb|AAFB02000395.1| Entamoeba histolytica HM-1:IMSS gcontig_11047...    26   4.2  
gb|AAFB02000002.1| Entamoeba histolytica HM-1:IMSS gcontig_11047...    26   4.2  
gb|AAFB02000351.1| Entamoeba histolytica HM-1:IMSS gcontig_11047...    25   5.5  
gb|AAFB02000324.1| Entamoeba histolytica HM-1:IMSS gcontig_11047...    25   5.5  
gb|AAFB02000044.1| Entamoeba histolytica HM-1:IMSS gcontig_11047...    25   5.5  
gb|AAFB02000015.1| Entamoeba histolytica HM-1:IMSS gcontig_11047...    25   5.5  
gb|AAFB02001575.1| Entamoeba histolytica HM-1:IMSS gcontig_11047...    25   7.2  
gb|AAFB02000377.1| Entamoeba histolytica HM-1:IMSS gcontig_11047...    25   7.2  
gb|AAFB02000058.1| Entamoeba histolytica HM-1:IMSS gcontig_11047...    25   7.2  
gb|AAFB02000043.1| Entamoeba histolytica HM-1:IMSS gcontig_11047...    25   7.2  
gb|AAFB02000022.1| Entamoeba histolytica HM-1:IMSS gcontig_11047...    25   7.2  
gb|AAFB02000019.1| Entamoeba histolytica HM-1:IMSS gcontig_11047...    25   7.2  
gb|AAFB02000008.1| Entamoeba histolytica HM-1:IMSS gcontig_11047...    25   7.2  
gb|AAFB02001749.1| Entamoeba histolytica HM-1:IMSS gcontig_11047...    25   9.5  
gb|AAFB02001365.1| Entamoeba histolytica HM-1:IMSS gcontig_11047...    25   9.5  
gb|AAFB02000699.1| Entamoeba histolytica HM-1:IMSS gcontig_11047...    25   9.5  
gb|AAFB02000433.1| Entamoeba histolytica HM-1:IMSS gcontig_11047...    25   9.5  
gb|AAFB02000281.1| Entamoeba histolytica HM-1:IMSS gcontig_11047...    25   9.5  
gb|AAFB02000274.1| Entamoeba histolytica HM-1:IMSS gcontig_11047...    25   9.5  
gb|AAFB02000253.1| Entamoeba histolytica HM-1:IMSS gcontig_11047...    25   9.5  
gb|AAFB02000080.1| Entamoeba histolytica HM-1:IMSS gcontig_11047...    25   9.5  
gb|AAFB02000069.1| Entamoeba histolytica HM-1:IMSS gcontig_11047...    25   9.5  
gb|AAFB02000034.1| Entamoeba histolytica HM-1:IMSS gcontig_11047...    25   9.5  

>gb|AAFB02000037.1| Entamoeba histolytica HM-1:IMSS gcontig_1104750506525, whole genome
             shotgun sequence
          Length = 70380

 Score = 30.0 bits (66), Expect = 0.23
 Identities = 18/37 (48%), Positives = 21/37 (56%)
 Frame = +3

Query: 31    NALHNKFILPIINFIKGIINFIKTVINILAIFFKTLL 67
             N L NKFIL  +NF+    NFI      L +FF TLL
Sbjct: 60486 NVLSNKFILLFLNFLFSFFNFI-----*LFLFFITLL 60581


>gb|AAFB02000276.1| Entamoeba histolytica HM-1:IMSS gcontig_1104750514655, whole genome
             shotgun sequence
          Length = 21685

 Score = 29.6 bits (65), Expect = 0.29
 Identities = 18/64 (28%), Positives = 32/64 (50%)
 Frame = -3

Query: 1     MDDRKENKKNADYEIFLRDRKLKYEKIRKRNALHNKFILPIINFIKGIINFIKTVINILA 60
             MD  KEN++  +    L D K KYEK+R      ++ +  + + +  I N I+ +  I+ 
Sbjct: 15680 MDRIKENEQQINVMTKLEDFKNKYEKLR------DELVFDLNHLLNNIDNSIEQMTTIMT 15519

Query: 61    IFFK 64
               F+
Sbjct: 15518 TIFE 15507


>gb|AAFB02000013.1| Entamoeba histolytica HM-1:IMSS gcontig_1104750515439, whole genome
             shotgun sequence
          Length = 102109

 Score = 29.6 bits (65), Expect = 0.29
 Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 5/42 (11%)
 Frame = +1

Query: 28    RKRNALHNKFIL-----PIINFIKGIINFIKTVINILAIFFK 64
             RK N LHN F +     P+IN +  ++  I T  N  ++FFK
Sbjct: 26398 RKCNKLHNSFKVF*SGVPVINNLFSVVVLINTSYNCPSLFFK 26523



 Score = 24.6 bits (52), Expect = 9.5
 Identities = 19/52 (36%), Positives = 23/52 (44%)
 Frame = -3

Query: 20    RKLKYEKIRKRNALHNKFILPIINFIKGIINFIKTVINILAIFFKTLLGQSN 71
             R  KY  +  ++  HNKFI  +I FIK           I   FF   L QSN
Sbjct: 80465 RNKKY*IVSCQSKRHNKFINYLIRFIK-----------IQQPFFLVYLHQSN 80343


>gb|AAFB02000255.1| Entamoeba histolytica HM-1:IMSS gcontig_1104750505419, whole genome
            shotgun sequence
          Length = 23307

 Score = 29.3 bits (64), Expect = 0.38
 Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
 Frame = -2

Query: 52   IKTVINILAIFFKTLLGQ--SNTSQSSNGKNNDDDDGFFKKKRTGGLP 97
            + +  N+   FF T+ G   S ++ S N +NN     FF+   + GLP
Sbjct: 5882 LTSTFNLFPNFFSTIRGDGPSKSANSFNNQNNSKGVNFFRSSFSFGLP 5739


>gb|AAFB02000056.1| Entamoeba histolytica HM-1:IMSS gcontig_1104750507722, whole genome
             shotgun sequence
          Length = 55433

 Score = 29.3 bits (64), Expect = 0.38
 Identities = 18/51 (35%), Positives = 30/51 (58%), Gaps = 2/51 (3%)
 Frame = +3

Query: 33    LHNKFILPIINFIKGIINFIKTVINILAIFFKTLLGQ--SNTSQSSNGKNN 81
             L+  FIL +   I  IINFIKT+I  + I+ + ++ +   NT + +  K+N
Sbjct: 45561 LNLSFILFLHE*ITNIINFIKTIITFILIYIRIIVIK*TYNTKKIN*NKDN 45713



 Score = 25.4 bits (54), Expect = 5.5
 Identities = 13/46 (28%), Positives = 24/46 (52%)
 Frame = -2

Query: 22   LKYEKIRKRNALHNKFILPIINFIKGIINFIKTVINILAIFFKTLL 67
            L  EK +  N L+N  I P+I      +  + ++IN++ +  K L+
Sbjct: 3226 LNCEKSKSSNVLNNVLICPLIISFCITLRLLVSLINVIIMRHKCLI 3089



 Score = 25.0 bits (53), Expect = 7.2
 Identities = 16/43 (37%), Positives = 20/43 (46%)
 Frame = -2

Query: 39   LPIINFIKGIINFIKTVINILAIFFKTLLGQSNTSQSSNGKNN 81
            + I +  K  +NFIK    IL I F         S+SSN  NN
Sbjct: 3313 IEITSSFKVFVNFIKQQFIILVITFTISSLNCEKSKSSNVLNN 3185


>gb|AAFB02000526.1| Entamoeba histolytica HM-1:IMSS gcontig_1104750512336, whole genome
            shotgun sequence
          Length = 10040

 Score = 28.5 bits (62), Expect = 0.66
 Identities = 16/49 (32%), Positives = 26/49 (53%)
 Frame = -2

Query: 37   FILPIINFIKGIINFIKTVINILAIFFKTLLGQSNTSQSSNGKNNDDDD 85
            F L I  F+     FIKT  N+L + F+  +  +N+ ++   KNN+  D
Sbjct: 6334 FFLLIFRFVDV---FIKTRGNLLKLLFENDVSTTNSQRNDQQKNNEKKD 6197


>gb|AAFB02000102.1| Entamoeba histolytica HM-1:IMSS gcontig_1104750511810, whole genome
            shotgun sequence
          Length = 43500

 Score = 28.1 bits (61), Expect = 0.86
 Identities = 19/41 (46%), Positives = 23/41 (56%)
 Frame = -2

Query: 22   LKYEKIRKRNALHNKFILPIINFIKGIINFIKTVINILAIF 62
            +KY K  KRN L    +L  I FI G+I  I T I +L IF
Sbjct: 4085 IKYNKKIKRNFLFLTLLLV*IIFIDGLI--INTYIYVLQIF 3969


>gb|AAFB02000285.1| Entamoeba histolytica HM-1:IMSS gcontig_1104750504875, whole genome
             shotgun sequence
          Length = 21059

 Score = 27.7 bits (60), Expect = 1.1
 Identities = 14/40 (35%), Positives = 22/40 (55%)
 Frame = -1

Query: 38    ILPIINFIKGIINFIKTVINILAIFFKTLLGQSNTSQSSN 77
             ++ + NFI  I+ FIK +  I  I +  +L  SN   +SN
Sbjct: 10283 LISLFNFISFIVVFIKFLYFISCIMYIHILSFSNAGNTSN 10164


>gb|AAFB02000277.1| Entamoeba histolytica HM-1:IMSS gcontig_1104750515121, whole genome
             shotgun sequence
          Length = 21561

 Score = 27.7 bits (60), Expect = 1.1
 Identities = 17/28 (60%), Positives = 20/28 (71%), Gaps = 3/28 (10%)
 Frame = +1

Query: 36    KFILPIIN---FIKGIINFIKTVINILA 60
             K  L I+N   FIK IINFI +VINIL+
Sbjct: 17740 KLFLLILN*LLFIK*IINFIFSVINILS 17823


>gb|AAFB02000185.1| Entamoeba histolytica HM-1:IMSS gcontig_1104750507298, whole genome
             shotgun sequence
          Length = 31049

 Score = 27.7 bits (60), Expect = 1.1
 Identities = 19/75 (25%), Positives = 38/75 (50%)
 Frame = +1

Query: 34    HNKFILPIINFIKGIINFIKTVINILAIFFKTLLGQSNTSQSSNGKNNDDDDGFFKKKRT 93
             +N F+  ++N     + F+    + L+ FFK    ++     +NG+N  D+ G  KKK+ 
Sbjct: 18907 NNSFLFFVLNLN---LYFMSKRQSSLSRFFKPAK-RATVGGQNNGENKSDEKGNEKKKQE 19074

Query: 94    GGLPKSRIMELKNLG 108
                 K++ +++K  G
Sbjct: 19075 SIEEKNQSLQIKEEG 19119


>gb|AAFB02000107.1| Entamoeba histolytica HM-1:IMSS gcontig_1104750508004, whole genome
             shotgun sequence
          Length = 42556

 Score = 27.7 bits (60), Expect = 1.1
 Identities = 14/40 (35%), Positives = 22/40 (55%)
 Frame = +3

Query: 38    ILPIINFIKGIINFIKTVINILAIFFKTLLGQSNTSQSSN 77
             ++ + NFI  I+ FIK +  I  I +  +L  SN   +SN
Sbjct: 10194 LISLFNFISFIVVFIKFLYFISCIMYIHILSFSNAGNTSN 10313


>gb|AAFB02000581.1| Entamoeba histolytica HM-1:IMSS gcontig_1104750505255, whole genome
            shotgun sequence
          Length = 8375

 Score = 27.3 bits (59), Expect = 1.5
 Identities = 14/40 (35%), Positives = 22/40 (55%)
 Frame = -2

Query: 37   FILPIINFIKGIINFIKTVINILAIFFKTLLGQSNTSQSS 76
            F+L  INF+  I+N+I    +++     TL   S +S SS
Sbjct: 1846 FVLKSINFLGNILNYIFFTFSLVIFRRNTLFINSQSSSSS 1727



 Score = 25.8 bits (55), Expect = 4.2
 Identities = 15/51 (29%), Positives = 25/51 (49%), Gaps = 4/51 (7%)
 Frame = -2

Query: 42   INFIKGIINFIKTVINILAIFFKTLLGQSNT----SQSSNGKNNDDDDGFF 88
            +NF+   INF+  ++N +   F  ++ + NT    SQSS+         FF
Sbjct: 1852 LNFVLKSINFLGNILNYIFFTFSLVIFRRNTLFINSQSSSSSPRSFLSTFF 1700


>gb|AAFB02000047.1| Entamoeba histolytica HM-1:IMSS gcontig_1104750505681, whole genome
             shotgun sequence
          Length = 64346

 Score = 27.3 bits (59), Expect = 1.5
 Identities = 14/26 (53%), Positives = 17/26 (65%)
 Frame = +1

Query: 4     RKENKKNADYEIFLRDRKLKYEKIRK 29
             RKE KKN +  IF + +KL  EKI K
Sbjct: 43990 RKELKKNKEVSIFFQSKKLI*EKIFK 44067


>gb|AAFB02000018.1| Entamoeba histolytica HM-1:IMSS gcontig_1104750505091, whole genome
             shotgun sequence
          Length = 88560

 Score = 27.3 bits (59), Expect = 1.5
 Identities = 23/69 (33%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
 Frame = -3

Query: 8     KKNADYEIFLRDRKLK-YEKIRKRNALHNKFILP-IINFIKGIINFIKTVINILAIFFKT 65
             ++N +  I + D  LK  EKI     L  +   P +I+FIKGII   K + N L+ F + 
Sbjct: 12079 EENENETIMIDDLLLKRVEKINYSYILSKQASEPFVIDFIKGIIESCKYIGNTLS-FLRR 11903

Query: 66    LLGQSNTSQ 74
             ++ + N  Q
Sbjct: 11902 IILKKNPEQ 11876


>gb|AAFB02000233.1| Entamoeba histolytica HM-1:IMSS gcontig_1104750510060, whole genome
            shotgun sequence
          Length = 25092

 Score = 26.9 bits (58), Expect = 1.9
 Identities = 12/53 (22%), Positives = 25/53 (47%)
 Frame = +3

Query: 15   IFLRDRKLKYEKIRKRNALHNKFILPIINFIKGIINFIKTVINILAIFFKTLL 67
            +F+++    +  +        KFI   ++F+  +IN + + IN L  F K  +
Sbjct: 8445 VFIKNTNNSFSNVHNFIKSTLKFISNFLSFVNKVINSLLSFINFLVSFIKKFI 8603



 Score = 26.2 bits (56), Expect = 3.3
 Identities = 11/31 (35%), Positives = 18/31 (58%)
 Frame = +3

Query: 37   FILPIINFIKGIINFIKTVINILAIFFKTLL 67
            FI  +++FIK  I+F   +IN +  F   L+
Sbjct: 8565 FINFLVSFIKKFISFFLVIINFIVCFINKLI 8657


>gb|AAFB02000147.1| Entamoeba histolytica HM-1:IMSS gcontig_1104750513730, whole genome
             shotgun sequence
          Length = 35581

 Score = 26.9 bits (58), Expect = 1.9
 Identities = 12/39 (30%), Positives = 22/39 (56%)
 Frame = -2

Query: 35    NKFILPIINFIKGIINFIKTVINILAIFFKTLLGQSNTS 73
             + F+L I  FI  ++NFI  + +    F+K+L+    +S
Sbjct: 20598 SSFLL*IFLFIFNLLNFILYIFHCFLCFYKSLISSLRSS 20482


>gb|AAFB02000472.1| Entamoeba histolytica HM-1:IMSS gcontig_1104750516265, whole genome
            shotgun sequence
          Length = 11576

 Score = 26.6 bits (57), Expect = 2.5
 Identities = 15/43 (34%), Positives = 23/43 (53%)
 Frame = -3

Query: 4    RKENKKNADYEIFLRDRKLKYEKIRKRNALHNKFILPIINFIK 46
            ++ENKK     +F    K   + I+KRN+   K IL ++  IK
Sbjct: 2757 KRENKKGTRINVFQEIMKK*NDNIKKRNSKIKKRILKMLLKIK 2629


>gb|AAFB02000420.1| Entamoeba histolytica HM-1:IMSS gcontig_1104750505035, whole genome
           shotgun sequence
          Length = 14187

 Score = 26.6 bits (57), Expect = 2.5
 Identities = 16/41 (39%), Positives = 22/41 (53%)
 Frame = -3

Query: 37  FILPIINFIKGIINFIKTVINILAIFFKTLLGQSNTSQSSN 77
           FI+  I+F   I N+I T +NIL I F   L +   +  SN
Sbjct: 682 FIIKNISFSFEINNYISTFLNILHIIFYLNLHEKQQNILSN 560


>gb|AAFB02000256.1| Entamoeba histolytica HM-1:IMSS gcontig_1104750516163, whole genome
             shotgun sequence
          Length = 23250

 Score = 26.6 bits (57), Expect = 2.5
 Identities = 12/28 (42%), Positives = 18/28 (64%)
 Frame = +2

Query: 36    KFILPIINFIKGIINFIKTVINILAIFF 63
             K I+ +IN +  I+N  KT+ N+L I F
Sbjct: 14486 KIIIKLINSVADIVNNDKTIDNMLKIVF 14569


>gb|AAFB02000539.1| Entamoeba histolytica HM-1:IMSS gcontig_1104750511420, whole genome
            shotgun sequence
          Length = 9480

 Score = 26.2 bits (56), Expect = 3.3
 Identities = 12/37 (32%), Positives = 21/37 (56%)
 Frame = -2

Query: 31   NALHNKFILPIINFIKGIINFIKTVINILAIFFKTLL 67
            N L    ++ + + + GI+  IKT++ +L  F K LL
Sbjct: 3929 NKLKENIVINLWSNLSGIVKGIKTMVGLLIDFNKNLL 3819


>gb|AAFB02000339.1| Entamoeba histolytica HM-1:IMSS gcontig_1104750511480, whole genome
             shotgun sequence
          Length = 17014

 Score = 26.2 bits (56), Expect = 3.3
 Identities = 14/28 (50%), Positives = 16/28 (57%)
 Frame = +1

Query: 40    PIINFIKGIINFIKTVINILAIFFKTLL 67
             PII+FI GII F     NIL +F    L
Sbjct: 13951 PIISFIFGIIYFFDLFNNILFLFIYLFL 14034


>gb|AAFB02000269.1| Entamoeba histolytica HM-1:IMSS gcontig_1104750511904, whole genome
            shotgun sequence
          Length = 22161

 Score = 26.2 bits (56), Expect = 3.3
 Identities = 12/36 (33%), Positives = 20/36 (55%)
 Frame = +2

Query: 28   RKRNALHNKFILPIINFIKGIINFIKTVINILAIFF 63
            +++  LHNK I   + FI   I+F    + +L +FF
Sbjct: 2930 KRKKFLHNKLIYE*LKFIFKFISFSSNSLWMLLVFF 3037


>gb|AAFB02000178.1| Entamoeba histolytica HM-1:IMSS gcontig_1104750515991, whole genome
             shotgun sequence
          Length = 31535

 Score = 26.2 bits (56), Expect = 3.3
 Identities = 15/47 (31%), Positives = 23/47 (48%)
 Frame = -2

Query: 4     RKENKKNADYEIFLRDRKLKYEKIRKRNALHNKFILPIINFIKGIIN 50
             +K NK      I ++  KLKY+K           I+P++  I G+IN
Sbjct: 30445 KKRNKYKELKNILMKIEKLKYDK-----------IIPVVISINGLIN 30338


>gb|AAFB02000141.1| Entamoeba histolytica HM-1:IMSS gcontig_1104750510378, whole genome
             shotgun sequence
          Length = 36124

 Score = 26.2 bits (56), Expect = 3.3
 Identities = 11/28 (39%), Positives = 19/28 (67%)
 Frame = +3

Query: 3     DRKENKKNADYEIFLRDRKLKYEKIRKR 30
             +RKE ++    +I  R RK++Y+K+ KR
Sbjct: 29994 ERKEKRRAKTAKIVARVRKMEYQKLVKR 30077


>gb|AAFB02000040.1| Entamoeba histolytica HM-1:IMSS gcontig_1104750513570, whole genome
             shotgun sequence
          Length = 69304

 Score = 26.2 bits (56), Expect = 3.3
 Identities = 20/45 (44%), Positives = 25/45 (55%), Gaps = 12/45 (26%)
 Frame = +2

Query: 31    NALHNKFILPI--INFI------KGIINFI----KTVINILAIFF 63
             N L  KFIL    INFI      +G+ NFI     +VINI+ IF+
Sbjct: 43211 NFLLRKFILVFN*INFIIIIVLFRGLFNFIFQFLNSVINIIIIFY 43345


>gb|AAFB02000016.1| Entamoeba histolytica HM-1:IMSS gcontig_1104750504645, whole genome
             shotgun sequence
          Length = 93644

 Score = 26.2 bits (56), Expect = 3.3
 Identities = 21/83 (25%), Positives = 38/83 (45%), Gaps = 10/83 (12%)
 Frame = +2

Query: 1     MDDRKENKKNADYEIFLRDRKLKYEKIRKRNA--LHNKFILPI--------INFIKGIIN 50
             +D+R   +KN ++   +     + EKI  +    L   ++ PI        + F+KGII+
Sbjct: 53999 IDERIMTEKNNEHYKRVIHEMTETEKIHIKGLEILKEVYLFPITKSTNSESVTFVKGIIS 54178

Query: 51    FIKTVINILAIFFKTLLGQSNTS 73
              I+ +I +   F K +     TS
Sbjct: 54179 QIEIIIGVHKKFLKMMEEGEKTS 54247


>gb|AAFB02001182.1| Entamoeba histolytica HM-1:IMSS gcontig_1104750512764, whole genome
            shotgun sequence
          Length = 2453

 Score = 25.8 bits (55), Expect = 4.2
 Identities = 15/51 (29%), Positives = 29/51 (56%), Gaps = 3/51 (5%)
 Frame = -1

Query: 20   RKLKYEKIRKRNA---LHNKFILPIINFIKGIINFIKTVINILAIFFKTLL 67
            RK K +++  +N    +  K+ L + NFI  II+F   ++ +  IFF +++
Sbjct: 2411 RKSKNKRLNMKNI*ILIQIKYKLTVNNFINYIISFH*LILILFKIFFISVI 2259


>gb|AAFB02000599.1| Entamoeba histolytica HM-1:IMSS gcontig_1104750512722, whole genome
            shotgun sequence
          Length = 7787

 Score = 25.8 bits (55), Expect = 4.2
 Identities = 15/51 (29%), Positives = 29/51 (56%), Gaps = 3/51 (5%)
 Frame = -2

Query: 20   RKLKYEKIRKRNA---LHNKFILPIINFIKGIINFIKTVINILAIFFKTLL 67
            RK K +++  +N    +  K+ L + NFI  II+F   ++ +  IFF +++
Sbjct: 1942 RKSKNKRLNMKNI*ILIQIKYKLTVNNFINYIISFH*LILILFKIFFISVI 1790


>gb|AAFB02000395.1| Entamoeba histolytica HM-1:IMSS gcontig_1104750512778, whole genome
             shotgun sequence
          Length = 14768

 Score = 25.8 bits (55), Expect = 4.2
 Identities = 9/26 (34%), Positives = 18/26 (69%)
 Frame = -3

Query: 6     ENKKNADYEIFLRDRKLKYEKIRKRN 31
             E KKN   E++L  ++++ EK+++ N
Sbjct: 11466 EEKKNNTEEVYLNQKQIEIEKVKEIN 11389


>gb|AAFB02000002.1| Entamoeba histolytica HM-1:IMSS gcontig_1104750508190, whole genome
             shotgun sequence
          Length = 170119

 Score = 25.8 bits (55), Expect = 4.2
 Identities = 13/46 (28%), Positives = 23/46 (50%)
 Frame = +2

Query: 21    KLKYEKIRKRNALHNKFILPIINFIKGIINFIKTVINILAIFFKTL 66
             K+++  I     L   F+L  +NF+   +NF+   +N L +F   L
Sbjct: 55250 KIRFNMIVLLRRLFLSFLLLFLNFLWLFLNFLWLFLNFLWLFLNFL 55387


>gb|AAFB02000351.1| Entamoeba histolytica HM-1:IMSS gcontig_1104750515865, whole genome
            shotgun sequence
          Length = 16595

 Score = 25.4 bits (54), Expect = 5.5
 Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
 Frame = -2

Query: 35   NKFILPIINFIKGI--INFIKTVINILAIFFKTLLGQSNTSQ 74
            +K ILPI+ FI GI  I  +  + N + I  K L   ++T Q
Sbjct: 4849 DKMILPILKFIHGIVSIELVDEIENNIEIVSKKLDQIAHTQQ 4724


>gb|AAFB02000324.1| Entamoeba histolytica HM-1:IMSS gcontig_1104750508406, whole genome
             shotgun sequence
          Length = 17853

 Score = 25.4 bits (54), Expect = 5.5
 Identities = 14/45 (31%), Positives = 28/45 (62%)
 Frame = -3

Query: 30    RNALHNKFILPIINFIKGIINFIKTVINILAIFFKTLLGQSNTSQ 74
             +N  HN  +LP+ NF+  +++  ++   +  +FF+ LL Q ++SQ
Sbjct: 11788 QNKYHNH-MLPL-NFLYQLLSLHESFYLLFFLFFQLLLSQCHSSQ 11660


>gb|AAFB02000044.1| Entamoeba histolytica HM-1:IMSS gcontig_1104750510388, whole genome
             shotgun sequence
          Length = 67994

 Score = 25.4 bits (54), Expect = 5.5
 Identities = 14/35 (40%), Positives = 18/35 (51%)
 Frame = +1

Query: 33    LHNKFILPIINFIKGIINFIKTVINILAIFFKTLL 67
             LHN  IL  +  IK    FI T+IN +  F   +L
Sbjct: 25657 LHN*LILLTLILIKNGYGFINTIIN*IISFLSLVL 25761


>gb|AAFB02000015.1| Entamoeba histolytica HM-1:IMSS gcontig_1104750512038, whole genome
             shotgun sequence
          Length = 99283

 Score = 25.4 bits (54), Expect = 5.5
 Identities = 18/56 (32%), Positives = 26/56 (46%), Gaps = 3/56 (5%)
 Frame = -1

Query: 37    FILPIINFIKGIINFIKTVINILAIFFKTL---LGQSNTSQSSNGKNNDDDDGFFK 89
             FI  ++NF  G  +     +NIL I + TL    G      S+  +N  + DGF K
Sbjct: 71764 FIYKLVNFETGTFSTNSVSLNILFINYGTLSITKGIGTIIASTGSQNFGNIDGFGK 71597


>gb|AAFB02001575.1| Entamoeba histolytica HM-1:IMSS gcontig_1104750507724, whole genome
           shotgun sequence
          Length = 1478

 Score = 25.0 bits (53), Expect = 7.2
 Identities = 15/47 (31%), Positives = 23/47 (48%)
 Frame = +2

Query: 33  LHNKFILPIINFIKGIINFIKTVINILAIFFKTLLGQSNTSQSSNGK 79
           L  +FIL ++     I   +K ++NI  I F       + +QSSN K
Sbjct: 383 LVRRFILILMTLF*FIFTIVKLIVNI-TIIFNVFQISPDINQSSNSK 520


>gb|AAFB02000377.1| Entamoeba histolytica HM-1:IMSS gcontig_1104750513960, whole genome
            shotgun sequence
          Length = 15431

 Score = 25.0 bits (53), Expect = 7.2
 Identities = 14/36 (38%), Positives = 21/36 (58%)
 Frame = -2

Query: 28   RKRNALHNKFILPIINFIKGIINFIKTVINILAIFF 63
            RKR+ L  KF++ ++  IK  +  + T  NIL I F
Sbjct: 4720 RKRHILLLKFLIILLILIKHSVRIMFTQQNILFIHF 4613


>gb|AAFB02000058.1| Entamoeba histolytica HM-1:IMSS gcontig_1104750511064, whole genome
             shotgun sequence
          Length = 55261

 Score = 25.0 bits (53), Expect = 7.2
 Identities = 13/35 (37%), Positives = 17/35 (48%)
 Frame = -3

Query: 9     KNADYEIFLRDRKLKYEKIRKRNALHNKFILPIIN 43
             KN      +R R  KYEKIR++    N+    I N
Sbjct: 19556 KNKRNNKIIRKRNYKYEKIRRKKLKKNRIKEEISN 19452


>gb|AAFB02000043.1| Entamoeba histolytica HM-1:IMSS gcontig_1104750511578, whole genome
             shotgun sequence
          Length = 68595

 Score = 25.0 bits (53), Expect = 7.2
 Identities = 18/54 (33%), Positives = 30/54 (55%)
 Frame = -3

Query: 9     KNADYEIFLRDRKLKYEKIRKRNALHNKFILPIINFIKGIINFIKTVINILAIF 62
             +N+ + I +++  L   K   RNA+HN     +I  I+GI  FI+  I++L  F
Sbjct: 32836 RNSYHLIIVQNEFLLQLKKSFRNAIHNHNPFILIYLIQGI--FIEKYIHLLI*F 32681


>gb|AAFB02000022.1| Entamoeba histolytica HM-1:IMSS gcontig_1104750515785, whole genome
             shotgun sequence
          Length = 78128

 Score = 25.0 bits (53), Expect = 7.2
 Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 3/70 (4%)
 Frame = +1

Query: 5     KENKKNADYEIFLRDRKLKYEKIRKRNALHNKFI---LPIINFIKGIINFIKTVINILAI 61
             K NKK  +     R  K+    ++KRN  +NKF      +IN+    +N I+ ++  L+I
Sbjct: 55537 KNNKKERNVS---RQMKIGMIHLKKRN*KNNKFNNIKSKVINYFSQKVNIIR*IL-FLSI 55704

Query: 62    FFKTLLGQSN 71
               K+   QSN
Sbjct: 55705 LLKS---QSN 55725


>gb|AAFB02000019.1| Entamoeba histolytica HM-1:IMSS gcontig_1104750506751, whole genome
            shotgun sequence
          Length = 88539

 Score = 25.0 bits (53), Expect = 7.2
 Identities = 21/85 (24%), Positives = 34/85 (40%)
 Frame = +2

Query: 30   RNALHNKFILPIINFIKGIINFIKTVINILAIFFKTLLGQSNTSQSSNGKNNDDDDGFFK 89
            RN L+  +   I +F+   I      + I+ +FF+     +N     +  NN+    FF 
Sbjct: 9236 RNYLNKIWTNSINHFLPHFIF*CTYCLRIIFLFFRVFFRSTNRYIRYSVFNNNKSSSFFY 9415

Query: 90   KKRTGGLPKSRIMELKNLGTCLGST 114
             KR           +KN+  CL  T
Sbjct: 9416 *KRC----------IKNIFYCLSKT 9460


>gb|AAFB02000008.1| Entamoeba histolytica HM-1:IMSS gcontig_1104750512822, whole genome
             shotgun sequence
          Length = 118116

 Score = 25.0 bits (53), Expect = 7.2
 Identities = 22/56 (39%), Positives = 29/56 (51%)
 Frame = +2

Query: 22    LKYEKIRKRNALHNKFILPIINFIKGIINFIKTVINILAIFFKTLLGQSNTSQSSN 77
             L + K++K N   NK  L  + +I    N I  VIN + I FKT+L Q   S S N
Sbjct: 78488 LCFIKVKKNN---NK--LSSLYYIIKSNNNIYYVINYIQILFKTILSQ*CISISLN 78640


>gb|AAFB02001749.1| Entamoeba histolytica HM-1:IMSS gcontig_1104750513508, whole genome
           shotgun sequence
          Length = 1252

 Score = 24.6 bits (52), Expect = 9.5
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = +2

Query: 44  FIKGIINFIKTVINILAIFFKTLLGQSN 71
           F K IINFI  +INI + F    +  +N
Sbjct: 737 FYKTIINFINFLINISSKFISIFIFNNN 820


>gb|AAFB02001365.1| Entamoeba histolytica HM-1:IMSS gcontig_1104750511996, whole genome
           shotgun sequence
          Length = 1890

 Score = 24.6 bits (52), Expect = 9.5
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = -1

Query: 44  FIKGIINFIKTVINILAIFFKTLLGQSN 71
           F K IINFI  +INI + F    +  +N
Sbjct: 792 FYKTIINFINFLINISSKFISIFIFNNN 709


>gb|AAFB02000699.1| Entamoeba histolytica HM-1:IMSS gcontig_1104750512614, whole genome
            shotgun sequence
          Length = 6326

 Score = 24.6 bits (52), Expect = 9.5
 Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 5/50 (10%)
 Frame = +1

Query: 27   IRKRNALHNKFIL-----PIINFIKGIINFIKTVINILAIFFKTLLGQSN 71
            ++K N   N FI      P+  FIK I+     + NIL+  +KTL+  ++
Sbjct: 2419 VKKDNNFMNNFIEYSSN*PLTYFIK*IMTIH*VISNILSKKYKTLISTTS 2568


>gb|AAFB02000433.1| Entamoeba histolytica HM-1:IMSS gcontig_1104750516075, whole genome
             shotgun sequence
          Length = 13274

 Score = 24.6 bits (52), Expect = 9.5
 Identities = 12/34 (35%), Positives = 20/34 (58%)
 Frame = +3

Query: 34    HNKFILPIINFIKGIINFIKTVINILAIFFKTLL 67
             H+ FI   +   K   N +KT+++ L I+FK +L
Sbjct: 10164 HSVFIFF*VKSNKIYENSLKTIVDYLLIYFKIIL 10265


>gb|AAFB02000281.1| Entamoeba histolytica HM-1:IMSS gcontig_1104750514563, whole genome
            shotgun sequence
          Length = 21188

 Score = 24.6 bits (52), Expect = 9.5
 Identities = 15/50 (30%), Positives = 28/50 (56%), Gaps = 3/50 (6%)
 Frame = -3

Query: 21   KLKYEKIRKRNA---LHNKFILPIINFIKGIINFIKTVINILAIFFKTLL 67
            K K ++I  +N    +  K+ L + NFI  II+F   ++ +  IFF +++
Sbjct: 8073 KSKNKRINMKNI*ILIQIKYKLTVNNFINYIISFH*LILILFKIFFISVI 7924


>gb|AAFB02000274.1| Entamoeba histolytica HM-1:IMSS gcontig_1104750511844, whole genome
             shotgun sequence
          Length = 21775

 Score = 24.6 bits (52), Expect = 9.5
 Identities = 14/36 (38%), Positives = 20/36 (55%)
 Frame = +1

Query: 31    NALHNKFILPIINFIKGIINFIKTVINILAIFFKTL 66
             N L   FI+P+I+ I GII    +    + IFF +L
Sbjct: 19660 NLLLYLFIIPLIDIITGIILTSFSFSIFIRIFFNSL 19767


>gb|AAFB02000253.1| Entamoeba histolytica HM-1:IMSS gcontig_1104750512482, whole genome
             shotgun sequence
          Length = 23360

 Score = 24.6 bits (52), Expect = 9.5
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = +1

Query: 31    NALHNKFILPIINFIKGIINFIKTVINILAIFFKTL 66
             N L   FI+P+I  I GII         +++FF +L
Sbjct: 17176 NLLLELFIIPLIEIITGIILTSFNFSIFISLFFNSL 17283


>gb|AAFB02000080.1| Entamoeba histolytica HM-1:IMSS gcontig_1104750504773, whole genome
             shotgun sequence
          Length = 47872

 Score = 24.6 bits (52), Expect = 9.5
 Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
 Frame = -3

Query: 15    IFLRDRKLKYEKIRKRNAL--HNKFILPIINFIKGIINFIKTVIN 57
             +FL    LK +K+ K+  L   N F+L I+  +K    F+K V+N
Sbjct: 24080 LFLHLFLLKLKKLNKKTKLLFKNYFLLEIVWNMKMTYVFLKKVLN 23946


>gb|AAFB02000069.1| Entamoeba histolytica HM-1:IMSS gcontig_1104750504923, whole genome
             shotgun sequence
          Length = 50943

 Score = 24.6 bits (52), Expect = 9.5
 Identities = 13/30 (43%), Positives = 17/30 (56%)
 Frame = -2

Query: 4     RKENKKNADYEIFLRDRKLKYEKIRKRNAL 33
             + E  K    E   ++RKLK EKI+K  AL
Sbjct: 15026 KSEEAKKLQQEKEEKERKLKEEKIKKMMAL 14937


>gb|AAFB02000034.1| Entamoeba histolytica HM-1:IMSS gcontig_1104750506871, whole genome
             shotgun sequence
          Length = 71042

 Score = 24.6 bits (52), Expect = 9.5
 Identities = 16/33 (48%), Positives = 19/33 (57%), Gaps = 3/33 (9%)
 Frame = +2

Query: 33    LHNK---FILPIINFIKGIINFIKTVINILAIF 62
             LHNK   FI    NFIK + +FIK   + LA F
Sbjct: 23255 LHNKSRVFITFFWNFIKFLNSFIKCFFSKLASF 23353


  Database: genome.fa
    Posted date:  Jan 19, 2010  5:04 PM
  Number of letters in database: 20,771,095
  Number of sequences in database:  2172
  
Lambda     K      H
   0.320    0.140    0.395 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,279,514
Number of Sequences: 2172
Number of extensions: 63515
Number of successful extensions: 704
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 638
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 703
length of query: 116
length of database: 6,923,698
effective HSP length: 83
effective length of query: 33
effective length of database: 6,743,422
effective search space: 222532926
effective search space used: 222532926
frameshift window, decay const: 40,  0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 52 (24.6 bits)