Command line: [exonerate -m p2g --showtargetgff -q seli.mus -t AANW02000134.1]
Hostname: [XAVI1]

C4 Alignment:
------------
         Query: SPP00000111_1.0 # Protein # Selenoprotein I (SelI) # Mus musculus # Complete
        Target: gi|145687599|gb|AANW02000134.1| Entamoeba invadens IP1 gcontig_1105074721018, whole genome shotgun sequence:[revcomp]
         Model: protein2genome:local
     Raw score: 163
   Query range: 84 -> 186
  Target range: 42661 -> 42370

    85 : GlyHisLysHisValProAspTrpValTrpIleValValGlyIleLeuAsnPheAlaAla :   104
         |||!  :!!.!.:!!|||   !:::!!!:::!!:!!:!!!.!:!!!!!! !|||  !  !
         GlyLeuGluGluMetProArgTyrLeuTyrValLeuMetAlaLeuPheIlePheLeuTyr
 42661 : GGCCTAGAGGAAATGCCAAGATACTTATACGTTTTAATGGCGCTCTTCATCTTTTTGTAT : 42604

   105 : TyrThrLeuAspGlyValAspGlyLysGlnAlaArgArgThrAsnSerSerThrProLeu :   124
          ! ! !  !|||..!:!!||||||!:!|||||||||||||||:!!!:!:!!|||||||||
         GlnIleAlaAspAsnIleAspGlyArgGlnAlaArgArgThrHisAsnAlaThrProLeu
 42603 : CAAATAGCAGACAACATAGATGGAAGACAAGCAAGAAGAACACACAACGCAACACCTTTA : 42544

   125 : GlyGluLeuPheAspHisGlyLeuAspSerTrpSerCysValTyrPheValValThrVal :   144
         |||||||||||||||||||||  !||||||               .!.:!!:!!  !:!!
         GlyGluLeuPheAspHisGlyAsnAspSer---------------IleMetIleGlyIle
 42543 : GGAGAGTTATTTGACCACGGCAATGACTCG---------------ATAATGATTGGGATT : 42499

   145 : TyrSerIlePheGlyArgGlyProThrGlyValSerValPheValLeuTyrLeuLeuLeu :   164
         !:!:!!:!!|||! !  !  !  !  !  !||||||..!   :!!  !  !:!!:!!|||
         PheAlaLeuPheValValLeuCysLeuHisValSerThrThrLeuThrLeuIleValLeu
 42498 : TTTGCACTATTTGTTGTGTTATGTTTACACGTGTCGACTACATTAACACTTATTGTCCTT : 42439

   165 : TrpValValLeuPheSerPheIleLeuSerHisTrpGluLysTyrAsnThrGlyValLeu :   184
         !  :!!:!!! !!!.  !|||.!!|||||||||||||||:!!|||:!!||||||||||||
         LeuMetLeuTyrLeuValPhePheLeuSerHisTrpGluGluTyrHisThrGlyValLeu
 42438 : TTAATGCTCTATTTGGTCTTCTTCTTAAGTCATTGGGAAGAGTACCACACCGGTGTTTTG : 42379

   185 : PheLeu :   186
         .!.|||
         IleLeu
 42378 : ATATTA : 42371

vulgar: SPP00000111_1.0 84 186 . gi|145687599|gb|AANW02000134.1| 42661 42370 - 163 M 50 150 G 5 0 M 47 141
# --- START OF GFF DUMP ---
#
#
##gff-version 2
##source-version exonerate:protein2genome:local 2.0.0
##date 2009-03-05
##type DNA
#
#
# seqname source feature start end score strand frame attributes
#
gi|145687599|gb|AANW02000134.1|	exonerate:protein2genome:local	gene	42371	42661	163	-	.	gene_id 1 ; sequence SPP00000111_1.0 ; gene_orientation .
gi|145687599|gb|AANW02000134.1|	exonerate:protein2genome:local	cds	42371	42661	.	-	.	
gi|145687599|gb|AANW02000134.1|	exonerate:protein2genome:local	exon	42371	42661	.	-	.	insertions 0 ; deletions 5
gi|145687599|gb|AANW02000134.1|	exonerate:protein2genome:local	similarity	42371	42661	163	-	.	alignment_id 1 ; Query SPP00000111_1.0 ; Align 42662 85 150 ; Align 42512 140 141
# --- END OF GFF DUMP ---
#
-- completed exonerate analysis