TBLASTN 2.2.17 [Aug-26-2007]


Query= SPP00000078_1.0  Protein  Methionine sulfoxide reductase A
(MsrA)  Mus musculus  Complete
         (233 letters)

Database: genome.fa 
           6902 sequences; 42,263,565 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AANW02001203.1| Entamoeba invadens IP1 gcontig_1105074713651,...   107   1e-23
gb|AANW02000017.1| Entamoeba invadens IP1 gcontig_1105074713889,...    30   1.2  
gb|AANW02001236.1| Entamoeba invadens IP1 gcontig_1105074714713,...    28   8.4  
gb|AANW02000042.1| Entamoeba invadens IP1 gcontig_1105074723432,...    28   8.6  
gb|AANW02000036.1| Entamoeba invadens IP1 gcontig_1105074713043,...    28   8.7  
gb|AANW02000940.1| Entamoeba invadens IP1 gcontig_1105074720072,...    28   9.0  

>gb|AANW02001203.1| Entamoeba invadens IP1 gcontig_1105074713651, whole genome shotgun
           sequence
          Length = 8792

 Score =  107 bits (267), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 58/154 (37%), Positives = 85/154 (55%)
 Frame = +1

Query: 64  QMAVFGMGCFWGAERKFWVLKGVYSTQVGFAGGHTRNPTYKEVCSEKTGHAEVVRVVYRP 123
           + A+F  GCFW   + F    GV S +VG+ GG T NPTY +VC+  TGH E V++VY  
Sbjct: 97  KTAIFAGGCFWCMVKPFDTYPGVKSVEVGYTGGTTVNPTYDDVCTGNTGHREAVQIVYDE 276

Query: 124 EHISFEELLKVFWENHDPTQGMRQGNDFGTQYRSAVYPTSAVQMEAALRSKEEYQKVLSK 183
             + + ELL++++ + DPT G  Q  D G  Y++A+Y +   Q + A    E  Q  LS 
Sbjct: 277 SQMPYRELLEIYFLSIDPTDGDGQFADKGESYKTAIYYSDEAQRKEAETYIEALQ--LSG 450

Query: 184 HNFGPITTDIREGQVFYYAEDYHQQYLSKNPDGY 217
               PI   + + + FY AE+YHQ Y   + + Y
Sbjct: 451 RYDRPIKVQLVQAKPFYRAEEYHQNYYKTHHNHY 552