tRNAscan-SE v.1.23 (April 2002) - scan sequences for transfer RNAs Please cite: Lowe, T.M. & Eddy, S.R. (1997) "tRNAscan-SE: A program for improved detection of transfer RNA genes in genomic sequence" Nucl. Acids Res. 25: 955-964. This program uses a modified, optimized version of tRNAscan v1.3 (Fichant & Burks, J. Mol. Biol. 1991, 220: 659-671), a new implementation of a multistep weight matrix algorithm for identification of eukaryotic tRNA promoter regions (Pavesi et al., Nucl. Acids Res. 1994, 22: 1247-1256), as well as the RNA covariance analysis package Cove v.2.4.2 (Eddy & Durbin, Nucl. Acids Res. 1994, 22: 2079-2088). ------------------------------------------------------------ Sequence file(s) to search: /home/mmariotti/genomes/protists/D.purpureum/genome.fa Search Mode: Eukaryotic Results written to: Standard output Output format: Tabular Searching with: tRNAscan + EufindtRNA -> Cove Covariance model: TRNA2-euk.cm tRNAscan parameters: Strict EufindtRNA parameters: Relaxed (Int Cutoff= -32.1) ------------------------------------------------------------ Sequence tRNA Bounds tRNA Anti Intron Bounds Cove Name tRNA # Begin End Type Codon Begin End Score -------- ------ ---- ------ ---- ----- ----- ---- ------ scaffold_2 1 152126 152206 Ser GCT 0 0 69.25 scaffold_2 2 162946 163026 Ser GCT 0 0 70.99 scaffold_3 1 11334 11264 His GTG 0 0 65.90 scaffold_4 1 6913 6985 Asn GTT 0 0 75.64 scaffold_4 2 19927 19998 Glu TTC 0 0 63.41 scaffold_4 3 11241 11169 Asn GTT 0 0 75.64 scaffold_5 1 7652 7723 Glu TTC 0 0 63.41 scaffold_5 2 196645 196574 Thr AGT 0 0 77.52 scaffold_5 3 195448 195377 Thr AGT 0 0 77.52 scaffold_5 4 192920 192849 Thr AGT 0 0 77.52 scaffold_5 5 171789 171717 Ile AAT 0 0 75.57 scaffold_5 6 164436 164355 Ser TGA 0 0 78.63 scaffold_5 7 151264 151192 Lys TTT 0 0 85.94 scaffold_5 8 90450 90380 Gly GCC 0 0 70.22 scaffold_6 1 35225 35154 Met CAT 0 0 65.88 scaffold_9 1 111613 111531 Leu TAA 0 0 43.82 scaffold_9 2 34383 34311 Ala AGC 0 0 63.23 scaffold_10 1 110557 110629 Lys TTT 0 0 85.94 scaffold_10 2 157522 157593 Glu TTC 0 0 63.41 scaffold_10 3 36284 36213 Glu TTC 0 0 63.41 scaffold_11 1 17385 17466 Ser TGA 0 0 78.63 scaffold_11 2 157566 157484 Leu TAA 0 0 43.82 scaffold_11 3 125948 125876 Asn GTT 0 0 75.64 scaffold_11 4 94910 94828 Leu TAA 0 0 43.82 scaffold_11 5 93278 93196 Leu TAA 0 0 43.82 scaffold_13 1 154007 153936 Thr TGT 0 0 75.42 scaffold_14 1 92701 92772 Glu TTC 0 0 63.41 scaffold_14 2 97382 97454 Asn GTT 0 0 75.64 scaffold_14 3 112541 112470 Cys GCA 0 0 59.85 scaffold_14 4 94153 94081 Asn GTT 0 0 75.64 scaffold_14 5 83616 83544 Asn GTT 0 0 75.64 scaffold_16 1 45659 45730 Glu TTC 0 0 63.41 scaffold_16 2 52889 52960 Glu TTC 0 0 63.41 scaffold_16 3 63013 63084 Glu TTC 0 0 63.41 scaffold_16 4 106914 106995 Ser TGA 0 0 76.10 scaffold_16 5 110224 110305 Ser TGA 0 0 78.63 scaffold_16 6 138959 139040 Ser TGA 0 0 78.63 scaffold_16 7 115767 115694 Phe GAA 0 0 71.01 scaffold_16 8 75708 75627 Ser TGA 0 0 78.63 scaffold_16 9 74998 74927 Glu CTC 0 0 67.58 scaffold_17 1 72314 72386 Gln TTG 0 0 64.15 scaffold_17 2 126788 126858 His GTG 0 0 65.90 scaffold_17 3 150448 150378 Pro TGG 0 0 56.77 scaffold_17 4 115501 115418 Leu CAG 0 0 56.37 scaffold_22 1 92383 92454 Asp GTC 0 0 80.70 scaffold_22 2 120583 120511 Ala AGC 0 0 63.23 scaffold_22 3 118247 118175 Asn GTT 0 0 64.50 scaffold_23 1 29522 29451 Glu TTC 0 0 57.09 scaffold_24 1 43296 43367 Asp GTC 0 0 80.70 scaffold_24 2 119508 119580 Lys TTT 0 0 85.94 scaffold_24 3 140434 140351 Tyr GTA 140398 140387 65.27 scaffold_24 4 55298 55225 Val AAC 0 0 73.48 scaffold_29 1 68513 68585 Lys TTT 0 0 85.94 scaffold_31 1 120358 120429 Asp GTC 0 0 80.70 scaffold_31 2 99297 99227 Gly GCC 0 0 70.22 scaffold_32 1 84677 84605 Lys TTT 0 0 85.94 scaffold_34 1 975 1046 Thr TGT 0 0 75.42 scaffold_36 1 15741 15823 Leu TAA 0 0 43.82 scaffold_38 1 16516 16589 Val TAC 0 0 73.91 scaffold_39 1 43769 43840 Thr AGT 0 0 77.52 scaffold_40 1 110875 110794 Leu AAG 0 0 62.36 scaffold_41 1 13798 13868 Gly GCC 0 0 70.22 scaffold_41 2 27318 27391 Val AAC 0 0 73.48 scaffold_41 3 42940 43013 Phe GAA 0 0 71.01 scaffold_41 4 45675 45748 Phe GAA 0 0 71.01 scaffold_41 5 10596 10526 Gly GCC 0 0 70.22 scaffold_42 1 112773 112701 Arg TCG 0 0 64.93 scaffold_42 2 6229 6159 Gly GCC 0 0 70.22 scaffold_43 1 16227 16301 Lys TTT 0 0 30.15 scaffold_44 1 52280 52353 Val AAC 0 0 73.48 scaffold_45 1 39971 39899 Arg TCT 0 0 68.96 scaffold_46 1 20207 20126 Leu AAG 0 0 62.36 scaffold_46 2 9672 9602 Gly GCC 0 0 70.22 scaffold_49 1 43247 43319 Gln TTG 0 0 64.15 scaffold_50 1 31788 31860 Ile AAT 0 0 75.57 scaffold_51 1 76372 76443 Glu TTC 0 0 63.41 scaffold_52 1 54662 54735 Arg ACG 0 0 72.54 scaffold_52 2 83472 83391 Leu AAG 0 0 62.36 scaffold_52 3 52087 52014 Arg ACG 0 0 72.54 scaffold_52 4 23318 23247 Gln CTG 0 0 59.29 scaffold_53 1 51655 51583 Ile AAT 0 0 75.57 scaffold_53 2 24562 24490 Gln TTG 0 0 64.15 scaffold_54 1 69980 70051 Asp GTC 0 0 80.70 scaffold_54 2 83765 83838 Phe GAA 0 0 71.01 scaffold_56 1 20660 20741 Ser TGA 0 0 78.63 scaffold_57 1 57946 58016 Gly GCC 0 0 70.22 scaffold_57 2 159 86 Val AAC 0 0 73.48 scaffold_58 1 46726 46633 Ala TGC 46689 46669 43.19 scaffold_59 1 57428 57501 Val AAC 0 0 73.48 scaffold_60 1 11800 11889 Trp CCA 11837 11853 56.86 scaffold_60 2 17785 17696 Trp CCA 17748 17732 56.86 scaffold_62 1 39971 39899 Asn GTT 0 0 75.64 scaffold_63 1 42053 41982 Asp GTC 0 0 80.70 scaffold_66 1 5942 6012 Pro TGG 0 0 56.77 scaffold_66 2 78278 78359 Leu AAG 0 0 62.36 scaffold_66 3 73904 73823 Leu AAG 0 0 62.36 scaffold_66 4 14285 14213 Gln TTG 0 0 64.15 scaffold_67 1 95187 95259 Lys CTT 0 0 83.65 scaffold_68 1 77564 77637 Phe GAA 0 0 71.01 scaffold_71 1 84341 84269 Ala AGC 0 0 63.23 scaffold_71 2 73448 73376 Ala AGC 0 0 63.23 scaffold_72 1 50415 50487 Ala AGC 0 0 63.23 scaffold_72 2 71589 71517 Asn GTT 0 0 75.64 scaffold_77 1 90139 90066 Arg ACG 0 0 72.54 scaffold_78 1 1902 1973 Thr TGT 0 0 75.42 scaffold_78 2 70810 70881 Cys GCA 0 0 59.85 scaffold_79 1 39821 39894 Val AAC 0 0 73.48 scaffold_82 1 47758 47686 Lys TTT 0 0 85.94 scaffold_82 2 40584 40512 Lys TTT 0 0 85.94 scaffold_84 1 64924 64994 Pro TGG 0 0 56.77 scaffold_86 1 58857 58930 Met CAT 0 0 71.78 scaffold_86 2 30920 30840 Ser GCT 0 0 70.99 scaffold_87 1 78044 78115 Asp GTC 0 0 80.70 scaffold_87 2 85358 85429 Asp GTC 0 0 80.70 scaffold_87 3 24926 24845 Leu AAG 0 0 62.36 scaffold_87 4 15849 15768 Leu AAG 0 0 62.36 scaffold_88 1 19128 19198 Pro TGG 0 0 56.77 scaffold_90 1 19174 19245 Thr TGT 0 0 75.42 scaffold_90 2 8894 8822 Asn GTT 0 0 75.64 scaffold_91 1 46691 46763 Ala AGC 0 0 63.23 scaffold_91 2 3914 3842 Gln TTG 0 0 64.15 scaffold_92 1 63626 63556 Gly GCC 0 0 70.22 scaffold_92 2 1512 1441 Thr TGT 0 0 75.42 scaffold_95 1 40972 41043 Thr AGT 0 0 77.52 scaffold_95 2 45348 45277 Thr AGT 0 0 77.52 scaffold_95 3 30683 30613 Gly GCC 0 0 70.22 scaffold_95 4 27445 27374 Thr AGT 0 0 77.52 scaffold_97 1 36189 36117 Lys TTT 0 0 85.94 scaffold_97 2 30749 30679 Pro TGG 0 0 56.77 scaffold_97 3 16573 16502 Met CAT 0 0 65.88 scaffold_98 1 47521 47593 Gln TTG 0 0 64.15 scaffold_98 2 69012 69084 Lys CTT 0 0 83.65 scaffold_98 3 75772 75845 Arg ACG 0 0 72.54 scaffold_98 4 64534 64453 Ser AGA 0 0 71.75 scaffold_98 5 60981 60908 Val AAC 0 0 73.48 scaffold_99 1 38660 38580 Leu CAA 0 0 47.87 scaffold_102 1 56368 56439 Asp GTC 0 0 80.70 scaffold_102 2 53388 53304 Tyr GTA 53352 53340 65.53 scaffold_103 1 59901 59830 Thr AGT 0 0 77.52 scaffold_109 1 21234 21306 Lys TTT 0 0 85.94 scaffold_110 1 61893 61977 Tyr GTA 61929 61941 65.40 scaffold_113 1 7346 7416 His GTG 0 0 65.90 scaffold_113 2 7498 7568 His GTG 0 0 65.90 scaffold_113 3 46439 46512 Met CAT 0 0 71.78 scaffold_113 4 62152 62224 Lys TTT 0 0 85.94 scaffold_113 5 69690 69762 Gln TTG 0 0 64.15 scaffold_116 1 54646 54575 Glu TTC 0 0 63.41 scaffold_117 1 66152 66224 Gln TTG 0 0 64.15 scaffold_121 1 55339 55266 Val TAC 0 0 73.91 scaffold_122 1 52350 52278 Arg TCT 0 0 68.96 scaffold_122 2 48225 48153 Arg TCT 0 0 68.96 scaffold_122 3 45296 45224 Arg TCT 0 0 68.96 scaffold_122 4 43033 42961 Arg TCT 0 0 68.96 scaffold_124 1 6463 6379 Tyr GTA 6427 6415 64.90 scaffold_126 1 15176 15269 Ala TGC 15213 15233 48.20 scaffold_127 1 30221 30293 Ala AGC 0 0 63.23 scaffold_127 2 64385 64457 Lys TTT 0 0 85.94 scaffold_127 3 34109 34039 Gly GCC 0 0 70.22 scaffold_129 1 1701 1772 Glu TTC 0 0 63.41 scaffold_129 2 18664 18736 Ile AAT 0 0 75.57 scaffold_129 3 22668 22740 Lys TTT 0 0 85.94 scaffold_129 4 67221 67311 Trp CCA 67258 67275 57.13 scaffold_129 5 36239 36149 Trp CCA 36202 36185 57.13 scaffold_133 1 69333 69251 Leu TAA 0 0 43.82 scaffold_133 2 13085 13004 Leu AAG 0 0 62.36 scaffold_135 1 40058 40140 Leu TAA 0 0 43.82 scaffold_135 2 48434 48351 Tyr GTA 48398 48387 65.27 scaffold_136 1 716 789 Arg ACG 0 0 72.54 scaffold_136 2 32879 32806 Val AAC 0 0 73.48 scaffold_138 1 68112 68193 Ser AGA 0 0 73.47 scaffold_141 1 5644 5716 Ile AAT 0 0 75.57 scaffold_141 2 13569 13641 Ile AAT 0 0 75.57 scaffold_141 3 18199 18271 Ile AAT 0 0 75.57 scaffold_141 4 28671 28742 Cys GCA 0 0 59.85 scaffold_141 5 39881 39810 Cys GCA 0 0 59.85 scaffold_141 6 36566 36495 Cys GCA 0 0 59.85 scaffold_142 1 15301 15373 Gln TTG 0 0 64.15 scaffold_143 1 21143 21216 Val TAC 0 0 73.91 scaffold_145 1 54461 54534 Arg ACG 0 0 72.54 scaffold_145 2 47679 47606 Arg ACG 0 0 72.54 scaffold_145 3 14574 14492 Leu TAA 0 0 43.82 scaffold_146 1 69446 69517 Asp GTC 0 0 80.70 scaffold_146 2 52402 52331 Asp GTC 0 0 80.70 scaffold_146 3 27901 27819 Leu TAA 0 0 43.82 scaffold_150 1 65970 66042 Thr CGT 0 0 69.36 scaffold_151 1 59536 59609 Met CAT 0 0 71.78 scaffold_151 2 56680 56609 Glu TTC 0 0 63.41 scaffold_152 1 16043 16113 His GTG 0 0 65.90 scaffold_154 1 13251 13324 Val AAC 0 0 73.48 scaffold_156 1 23245 23317 Lys TTT 0 0 85.94 scaffold_163 1 20196 20269 Val AAC 0 0 73.48 scaffold_165 1 17248 17318 Pro TGG 0 0 56.77 scaffold_167 1 5810 5883 Phe GAA 0 0 71.01 scaffold_168 1 40455 40545 Trp CCA 40492 40509 57.13 scaffold_168 2 53154 53244 Trp CCA 53191 53208 57.13 scaffold_170 1 23817 23745 Ala AGC 0 0 63.23 scaffold_174 1 53212 53131 Ser TGA 0 0 78.63 scaffold_174 2 13952 13879 Met CAT 0 0 71.78 scaffold_181 1 47694 47766 Ala AGC 0 0 63.23 scaffold_181 2 41694 41610 Tyr GTA 41658 41646 64.62 scaffold_181 3 27302 27232 Gly GCC 0 0 70.22 scaffold_182 1 27782 27866 Ile TAT 27819 27830 63.75 scaffold_183 1 23857 23928 Asp GTC 0 0 80.70 scaffold_183 2 37862 37934 Ile AAT 0 0 75.57 scaffold_185 1 8421 8348 Val AAC 0 0 73.48 scaffold_189 1 41546 41474 Gln TTG 0 0 64.15 scaffold_189 2 26440 26367 Val AAC 0 0 73.48 scaffold_191 1 40281 40354 Val AAC 0 0 73.48 scaffold_192 1 8773 8845 Ala AGC 0 0 63.23 scaffold_192 2 42112 42205 Ala TGC 42149 42169 48.70 scaffold_195 1 30211 30139 Arg TCT 0 0 68.96 scaffold_199 1 33638 33558 Ala CGC 33602 33593 33.64 scaffold_199 2 31966 31895 Glu TTC 0 0 63.41 scaffold_201 1 50746 50829 Tyr GTA 50782 50793 64.64 scaffold_205 1 46096 46015 Ser AGA 0 0 71.75 scaffold_207 1 25516 25597 Ser AGA 0 0 72.36 scaffold_210 1 35488 35416 Arg TCT 0 0 68.96 scaffold_210 2 15122 15043 Leu TAG 0 0 57.05 scaffold_211 1 5256 5341 Ile TAT 5294 5305 70.63 scaffold_211 2 30345 30264 Ser TGA 0 0 78.63 scaffold_213 1 26162 26090 Lys TTT 0 0 85.94 scaffold_217 1 14439 14511 Asn GTT 0 0 75.64 scaffold_219 1 49773 49700 Phe GAA 0 0 71.01 scaffold_219 2 17992 17919 Val AAC 0 0 73.48 scaffold_227 1 33869 33940 Glu TTC 0 0 63.41 scaffold_227 2 41508 41438 Gly TCC 0 0 69.44 scaffold_227 3 36049 35977 Ala AGC 0 0 63.23 scaffold_234 1 38725 38808 Tyr GTA 38761 38772 65.13 scaffold_234 2 8312 8242 Gly TCC 0 0 69.44 scaffold_244 1 28713 28784 Thr AGT 0 0 77.52 scaffold_244 2 40475 40547 Asn GTT 0 0 75.64 scaffold_244 3 7885 7814 Asp GTC 0 0 80.70 scaffold_246 1 21949 21877 Ala AGC 0 0 63.23 scaffold_247 1 45588 45660 Lys TTT 0 0 85.94 scaffold_248 1 31422 31351 Asp GTC 0 0 80.70 scaffold_250 1 29234 29305 Asp GTC 0 0 80.70 scaffold_265 1 1709 1782 Met CAT 0 0 71.78 scaffold_265 2 14930 15001 Glu TTC 0 0 63.41 scaffold_267 1 15195 15276 Leu AAG 0 0 62.36 scaffold_267 2 13368 13297 Glu TTC 0 0 63.41 scaffold_269 1 14370 14441 Asp GTC 0 0 80.70 scaffold_270 1 29815 29745 Gly TCC 0 0 71.75 scaffold_276 1 34236 34166 Gly GCC 0 0 70.22 scaffold_279 1 30344 30426 Leu TAA 0 0 43.82 scaffold_280 1 14224 14295 Thr AGT 0 0 77.52 scaffold_283 1 38889 38804 Ile TAT 38851 38840 68.00 scaffold_283 2 35720 35648 Lys CTT 0 0 83.65 scaffold_284 1 29355 29284 Pro TGG 0 0 74.79 scaffold_284 2 25724 25652 Ile AAT 0 0 75.57 scaffold_284 3 22985 22914 Glu CTC 0 0 67.58 scaffold_285 1 16119 16049 Gly GCC 0 0 70.22 scaffold_285 2 428 347 Ser AGA 0 0 71.75 scaffold_286 1 40754 40671 Tyr GTA 40718 40707 64.64 scaffold_286 2 6807 6734 Phe GAA 0 0 71.01 scaffold_287 1 41747 41820 Val TAC 0 0 69.82 scaffold_288 1 11902 11974 Ile AAT 0 0 75.57 scaffold_288 2 4535 4464 Met CAT 0 0 65.88 scaffold_290 1 13916 13998 Leu TAA 0 0 43.82 scaffold_291 1 27082 27154 Asn GTT 0 0 75.64 scaffold_294 1 1377 1448 Thr AGT 0 0 77.52 scaffold_295 1 32833 32903 Pro TGG 0 0 56.77 scaffold_295 2 34630 34712 Leu TAA 0 0 43.82 scaffold_295 3 13668 13597 Glu TTC 0 0 63.41 scaffold_295 4 7468 7386 Leu TAA 0 0 43.82 scaffold_299 1 18142 18070 Asn GTT 0 0 75.64 scaffold_300 1 34520 34448 Gln TTG 0 0 64.15 scaffold_302 1 35500 35572 Arg TCT 0 0 68.96 scaffold_304 1 36923 36994 Asp GTC 0 0 80.70 scaffold_305 1 33439 33510 Glu TTC 0 0 63.41 scaffold_316 1 14561 14489 Lys TTT 0 0 85.94 scaffold_319 1 13375 13447 Lys TTT 0 0 85.94 scaffold_319 2 18399 18327 Ile AAT 0 0 75.57 scaffold_320 1 12175 12245 His GTG 0 0 65.90 scaffold_322 1 10523 10595 Ala AGC 0 0 63.23 scaffold_322 2 24592 24502 Arg CCT 24555 24538 67.75 scaffold_322 3 16151 16081 His GTG 0 0 65.90 scaffold_322 4 12939 12867 Ala AGC 0 0 63.23 scaffold_323 1 18089 18018 Asp GTC 0 0 80.70 scaffold_328 1 17747 17665 Leu TAA 0 0 43.82 scaffold_328 2 15015 14944 Asp GTC 0 0 80.70 scaffold_329 1 14960 14888 Asn GTT 0 0 75.64 scaffold_330 1 32995 32923 Gln TTG 0 0 64.15 scaffold_336 1 21430 21500 Gly GCC 0 0 70.22 scaffold_336 2 23972 24043 Asp GTC 0 0 80.70 scaffold_339 1 2720 2791 Thr AGT 0 0 77.52 scaffold_341 1 29831 29761 Gly TCC 0 0 71.75 scaffold_347 1 1274 1354 Ser GCT 0 0 70.99 scaffold_350 1 8582 8510 Lys TTT 0 0 85.94 scaffold_351 1 28272 28352 Ser GCT 0 0 70.99 scaffold_363 1 22375 22445 Pro TGG 0 0 56.77 scaffold_363 2 10595 10525 Pro TGG 0 0 56.77 scaffold_367 1 21548 21621 Met CAT 0 0 71.78 scaffold_367 2 3037 2966 Asp GTC 0 0 80.70 scaffold_369 1 21184 21112 Lys CTT 0 0 83.65 scaffold_372 1 30878 30806 Ile AAT 0 0 75.57 scaffold_379 1 15597 15514 Tyr GTA 15561 15550 65.27 scaffold_385 1 6856 6784 Ile AAT 0 0 75.57 scaffold_390 1 27222 27294 Ile AAT 0 0 75.57 scaffold_391 1 18591 18518 Phe GAA 0 0 71.01 scaffold_404 1 17130 17049 Ser TGA 0 0 78.63 scaffold_408 1 21528 21448 Ser CGA 0 0 59.84 scaffold_414 1 1845 1916 Thr AGT 0 0 77.52 scaffold_416 1 19649 19578 Pro AGG 0 0 49.71 scaffold_433 1 14770 14840 Gly GCC 0 0 70.22 scaffold_445 1 13766 13673 Ala TGC 13729 13709 48.70 scaffold_448 1 4884 4955 Met CAT 0 0 65.88 scaffold_448 2 10254 10335 Ser TGA 0 0 78.63 scaffold_448 3 14599 14518 Ser TGA 0 0 78.63 scaffold_453 1 16938 16867 Cys GCA 0 0 59.85 scaffold_458 1 10788 10858 Pro TGG 0 0 56.77 scaffold_461 1 7898 7968 Gly GCC 0 0 70.22 scaffold_461 2 20444 20361 Tyr GTA 20408 20397 65.90 scaffold_467 1 6508 6580 Arg TCT 0 0 68.96 scaffold_477 1 20379 20307 Asn GTT 0 0 75.64 scaffold_478 1 492 421 Thr AGT 0 0 77.52 scaffold_482 1 8863 8945 Leu TAA 0 0 43.82 scaffold_489 1 4355 4427 Lys CTT 0 0 83.65 scaffold_491 1 14277 14207 Gly GCC 0 0 70.22 scaffold_509 1 10823 10895 Asn GTT 0 0 75.64 scaffold_518 1 14371 14299 Ala AGC 0 0 63.23 scaffold_520 1 12167 12097 Pro TGG 0 0 56.77 scaffold_541 1 14495 14568 Val AAC 0 0 73.48 scaffold_551 1 13708 13636 Ile AAT 0 0 75.57 scaffold_551 2 10128 10044 Ile TAT 10091 10080 58.45 scaffold_551 3 6560 6489 Asp GTC 0 0 80.70 scaffold_553 1 11047 11128 Leu AAG 0 0 62.36 scaffold_553 2 5622 5541 Leu AAG 0 0 62.36 scaffold_554 1 8239 8312 Phe GAA 0 0 71.01 scaffold_554 2 10806 10878 Ala AGC 0 0 63.23 scaffold_557 1 12124 12205 Ser TGA 0 0 78.63 scaffold_561 1 7569 7499 Pro TGG 0 0 56.77 scaffold_569 1 9761 9833 Ala AGC 0 0 63.23 scaffold_570 1 6651 6578 Phe GAA 0 0 71.01 scaffold_571 1 11099 11026 Met CAT 0 0 71.78 scaffold_582 1 7714 7787 Val AAC 0 0 73.48 scaffold_587 1 11667 11750 Tyr GTA 11703 11714 65.41 scaffold_589 1 12095 12024 Met CAT 0 0 65.88 scaffold_600 1 8657 8584 Phe GAA 0 0 71.01 scaffold_601 1 4043 4115 Ile AAT 0 0 75.57 scaffold_607 1 8969 8898 Met CAT 0 0 65.88 scaffold_609 1 11052 10970 Leu TAA 0 0 43.82 scaffold_623 1 9754 9827 Val AAC 0 0 73.48 scaffold_626 1 3759 3670 Trp CCA 3722 3706 56.86 scaffold_636 1 6510 6580 Gly GCC 0 0 70.22 scaffold_641 1 7820 7892 Lys TTT 0 0 85.94 scaffold_646 1 5711 5781 Pro TGG 0 0 56.77 scaffold_646 2 9836 9906 Pro TGG 0 0 56.77 scaffold_671 1 3881 3952 Glu TTC 0 0 63.41 scaffold_704 1 4391 4463 Lys CTT 0 0 83.65 scaffold_728 1 2154 2225 Thr AGT 0 0 77.52 scaffold_736 1 886 966 Ser GCT 0 0 70.99 scaffold_793 1 1166 1239 Phe GAA 0 0 71.01 scaffold_802 1 3289 3362 Phe GAA 0 0 71.01