Command line: [exonerate -m p2g --showtargetgff -q eEFsec.fa -t scaffolds_tallats/eEFsec_scaffold1_seqDNA.fa]
Hostname: [localhost]

C4 Alignment:
------------
         Query: SPP00000092_1.0 # Protein # Eukaryotic elongation factor (eEFSec) # Drosophila melanogaster # Complete
        Target: scaffold_1:subseq(1925740,6815)
         Model: protein2genome
     Raw score: 112
   Query range: 5 -> 130
  Target range: 3008 -> 3383

    6 : AsnIleGlyLeuLeuGlyHisValAspSerGlyLysThrThrLeuAlaLysAlaLeuSerSe :   26
        |||:!:!.!:!!:!!!.!|||||||||  !|||||||||||||||!.! ! |||:!!  !!.
        AsnValAlaIleValAlaHisValAspHisGlyLysThrThrLeuValAspAlaMetLeuLy
 3009 : AACGTGGCCATCGTCGCGCACGTCGACCACGGCAAGACGACGCTCGTCGACGCGATGCTCAA : 3069

   27 : rIleSerSerThrAlaAlaPheAspLysAsnProGlnSerValGluArgGlyIleThrLeuA :   47
        !   :!!..!..!  !  !  !:!!:!!  !  !:!!..!  !!  ! !! !! !!.!  !.
        sGluAlaGluValPheArgAlaAsnGluAlaValGluGluArgValMetAspSerAsnAspG
 3070 : GGAGGCCGAGGTCTTCCGCGCCAACGAGGCCGTCGAGGAGCGCGTCATGGACAGCAACGACC : 3132

   48 : spLeuGlyPheSerGlyLeuLeuValAspAlaProAlaHisLeuProGlnGlyGluGlnLeu :   67
        !.  ! !!    !!|||:!!  !:!!  !|||  !  !     !  !:!!  !:!!   :!!
        lnGluArgGluArgGlyIleThrIleLeuAlaLysAsnAlaAlaValGluTyrLysGlyVal
 3133 : AGGAGCGCGAGCGCGGCATCACGATCCTCGCGAAGAACGCGGCCGTGGAGTACAAGGGCGTG : 3192

   68 : GlnPheThrPheValAspCysProGlyHisAlaSerLeuIleArgThrIleIleGlyGlyAl :   88
        :!!.!!!.! !!||||||   ||||||||||||..!!!!    !!  !:!!    !!  !  
        LysIleAsnValValAspThrProGlyHisAlaAspPheGlyGlyGluValGluArgIleLe
 3193 : AAGATCAACGTCGTGGACACGCCGGGCCACGCGGACTTTGGGGGCGAGGTCGAGCGCATCCT : 3255

   89 : aGlnIleIleAspLeuMetLeuLeuValValAspAlaGlnLysGlyLysGlnThrGlnThrA :  109
        !.!.!!::!!|||  !:!:|||||||||||||||:!!   :!!|||  !:!! !!|||||| 
        uAsnMetValAspGlyValLeuLeuValValAspSerValGluGlyProLysProGlnThrA
 3256 : GAACATGGTCGACGGCGTCCTGCTCGTCGTCGACTCCGTCGAGGGGCCGAAGCCGCAGACGC : 3318

  110 : laGluCysLeuIleIleGlyGluLeuLeuGlnLysLysLeuIleValValIleAsnLysIle :  129
         !      |||!  !  !.!  !  !|||      :!!  !:!::!!|||:!:|||||||||
        rgPheValLeuLysLysAlaLeuGluLeuGlyLeuGlnAlaValLeuValValAsnLysIle
 3319 : GGTTCGTGCTCAAGAAGGCGCTGGAGCTCGGCCTCCAGGCCGTGCTCGTCGTGAACAAGATC : 3378

  130 : Asp :  130
        |||
        Asp
 3379 : GAC : 3383

vulgar: SPP00000092_1.0 5 130 . scaffold_1:subseq(1925740,6815) 3008 3383 + 112 M 125 375
# --- START OF GFF DUMP ---
#
#
##gff-version 2
##source-version exonerate:protein2genome 1.4.0
##date 2009-03-17
##type DNA
#
#
# seqname source feature start end score strand frame attributes
#
scaffold_1:subseq(1925740,6815)	exonerate:protein2genome	gene	3009	3383	112	+	.	gene_id 1 ; sequence SPP00000092_1.0 ; gene_orientation .
scaffold_1:subseq(1925740,6815)	exonerate:protein2genome	cds	3009	3383	.	+	.	
scaffold_1:subseq(1925740,6815)	exonerate:protein2genome	exon	3009	3383	.	+	.	insertions 0 ; deletions 0
scaffold_1:subseq(1925740,6815)	exonerate:protein2genome	similarity	3009	3383	112	+	.	alignment_id 1 ; Query SPP00000092_1.0 ; Align 3009 6 375
# --- END OF GFF DUMP ---
#
-- completed exonerate analysis
