TBLASTN 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= SPP00000034_1.0 # Prot # Thioredoxin reductase 1 (TR1) # Hs (499 letters) Database: genome.fa 4921 sequences; 228,543,505 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value supercont1.62 of Phytophthora infestans 486 e-136 supercont1.32 of Phytophthora infestans 244 1e-63 supercont1.28 of Phytophthora infestans 137 7e-41 supercont1.37 of Phytophthora infestans 140 2e-32 supercont1.92 of Phytophthora infestans 77 2e-13 supercont1.91 of Phytophthora infestans 50 3e-05 supercont1.130 of Phytophthora infestans 49 9e-05 supercont1.38 of Phytophthora infestans 33 3.4 supercont1.1 of Phytophthora infestans 33 3.7 >supercont1.62 of Phytophthora infestans Length = 695754 Score = 486 bits (1250), Expect = e-136, Method: Composition-based stats. Identities = 255/489 (52%), Positives = 326/489 (66%), Gaps = 10/489 (2%) Frame = -2 Query: 10 SYDYDLIIIXXXXXXXXXXXXXXXXXXXVMVLDFVTPTPLGTRWGLGGTCVNVGCIPKKL 69 SYDYDL++I V VLD+V P+P GT WGLGGTCVNVGCIPKKL Sbjct: 397496 SYDYDLVVIGGGSGGLACSKEAASFGQKVCVLDYVKPSPQGTSWGLGGTCVNVGCIPKKL 397317 Query: 70 MHQAALLGQALQ-DSRNYGWKVEETVKH----DWDRMIEAVQNHIGSLNWGYRVALREKK 124 MHQ++L+G+ L DS ++GW V DW +++ V +I +N+ Y+V LR K Sbjct: 397316 MHQSSLIGEVLHHDSASFGWNVSSGQGSAPIFDWKQLVTNVDGYIRGINFKYKVELRSKY 397137 Query: 125 VVYENAYGQFIGPHRIKATNNKGKEKIYSAERFLIATGERPRYLGIPGDKEYCISSDDLF 184 V YEN G FI PH ++ + + K + +IA G RPR L IPG E+ ISSDD+F Sbjct: 397136 VKYENFLGSFIDPHTLELWHPRKGSKQITTRDVVIAVGGRPRELTIPGG-EHAISSDDIF 396960 Query: 185 SLPYC-PGKTLVVGASYVALECAGFLAGIGLDVTVMVRSILLRGFDQDMANKIGEHME-E 242 + PGKTLVVGASYVALECAGFL G+G DV VMVRSILLRGFDQDMANKIGE+ME + Sbjct: 396959 WMKTKEPGKTLVVGASYVALECAGFLKGMGYDVKVMVRSILLRGFDQDMANKIGEYMEVQ 396780 Query: 243 HGIKFIRQFVPIKVEQIEAGTPGRLRVVAQSTNSEEIIEGEYNTVMLAIGRDACTRKIGL 302 GI+FIR+ VP + ++E G +V ++ E E +++V+ A GRD K+ L Sbjct: 396779 SGIEFIRKTVPQSITKLENGQ----LLVKWTSEDGESCEEAFDSVLNATGRDPDIAKLDL 396612 Query: 303 ETVGVKINEKTGKIPVTDEEQTNVPYIYAIGDILEDKVELTPVAIQAGRLLAQRLYAGST 362 + GVK+NEKTG+I V EQT+ P IYAIGD++ D ELTPVAIQAGRLL++RLY +T Sbjct: 396611 DKAGVKLNEKTGRIWVK-HEQTSTPNIYAIGDVI-DAPELTPVAIQAGRLLSRRLYNNAT 396438 Query: 363 VKCDYENVPTTVFTPLEYGACGLSEEKAVEKFGEENIEVYHSYFWPLEWTIPSRDN---N 419 V+ DY+ V T VFTP+EYG CGLSEE ++++FG++ IEVYH+ F PLEW++ + Sbjct: 396437 VQMDYDKVCTAVFTPIEYGCCGLSEEDSIKRFGKDKIEVYHTNFVPLEWSLSTETRAAAE 396258 Query: 420 KCYAKIICNTKDNERVVGFHVLGPNAGEVTQGFAAALKCGLTKKQLDSTIGIHPVCAEVF 479 CY K+IC+ ++ VVGFH LGPNAGEVTQ A+K G T Q+ T+GIHP AE F Sbjct: 396257 SCYVKVICDRIRDKFVVGFHYLGPNAGEVTQAMGLAMKLGFTYDQMVDTVGIHPTTAESF 396078 Query: 480 TTLSVTKRS 488 TTL VTK S Sbjct: 396077 TTLEVTKSS 396051 >supercont1.32 of Phytophthora infestans Length = 1926061 Score = 244 bits (622), Expect = 1e-63, Method: Composition-based stats. Identities = 156/436 (35%), Positives = 227/436 (52%), Gaps = 6/436 (1%) Frame = +2 Query: 54 GLGGTCVNVGCIPKKLMHQAALLGQALQDSRNYGWKVE----ETVKHDWDRMIEAVQNHI 109 GLGGTCVN GC+PKK+M AA + L +++Y E DW M +I Sbjct: 582110 GLGGTCVNFGCVPKKVMFNAAAHVEHLNRNKDYSINTASKDFEFGDFDWANMKTKRDAYI 582289 Query: 110 GSLNWGYRVALREKKVVYENAYGQFIGPHRIKATNNKGKEKIYSAERFLIATGERPRYLG 169 LN Y L KV + + + +I+ ++Y+ + L+A G P Sbjct: 582290 KRLNGIYERNLGNAKVDHVQGIAKLVAKDKIEVAG-----QVYTGKHVLVAPGGTPTVPD 582454 Query: 170 IPGDKEYCISSDDLFSLPYCPGKTLVVGASYVALECAGFLAGIGLDVTVMVR-SILLRGF 228 +PG E+ I SD F L P K VVGA Y+A+E AG + D T+ R +LR F Sbjct: 582455 LPG-MEHVIDSDGFFKLEQQPKKVAVVGAGYIAVELAGIFNVLKSDTTLFCRFDQVLRKF 582631 Query: 229 DQDMANKIGEHMEEHGIKFIRQFVPIKVEQIEAGTPGRLRVVAQSTNSEEIIEGEYNTVM 288 D + + + E ME+ G+ F+R ++VE+ + G +L V + + EE ++++++ Sbjct: 582632 DPIVRDLVNEEMEKAGVNFVRNSRAVRVEKQDNG---KLTYVV-TVDGEEQKFTDFDSIV 582799 Query: 289 LAIGRDACTRKIGLETVGVKINEKTGKIPVTDEEQTNVPYIYAIGDILEDKVELTPVAIQ 348 AIGR T+ +GLE VGVK+ E G I V +E T+V +YAIGD ELTPVAI Sbjct: 582800 YAIGRSPRTKDLGLEEVGVKLAEG-GFIEVDAQENTSVAGVYAIGDATVTGWELTPVAIA 582976 Query: 349 AGRLLAQRLYAGSTVKC-DYENVPTTVFTPLEYGACGLSEEKAVEKFGEENIEVYHSYFW 407 AGR L+ RL+ G C +Y +PT +F+ G G +E +A+ K+GEEN++VY S F Sbjct: 582977 AGRRLSDRLFGGEKDACLNYHQIPTVIFSHPPIGTIGYTEPEAIAKYGEENVKVYSSKFV 583156 Query: 408 PLEWTIPSRDNNKCYAKIICNTKDNERVVGFHVLGPNAGEVTQGFAAALKCGLTKKQLDS 467 L ++ + A + D E VVG HV G A E+ QGF A+K TK D+ Sbjct: 583157 NLIHSMADPERKGKTAMKLVTVGDKETVVGVHVAGEGADEMIQGFGVAVKMNATKADFDN 583336 Query: 468 TIGIHPVCAEVFTTLS 483 + IHP AE T++ Sbjct: 583337 IVAIHPTAAEELVTMA 583384 >supercont1.28 of Phytophthora infestans Length = 2122445 Score = 137 bits (345), Expect(2) = 7e-41, Method: Composition-based stats. Identities = 96/278 (34%), Positives = 140/278 (50%), Gaps = 10/278 (3%) Frame = +3 Query: 224 LLRGFDQDMANKIGEHMEEHGIKFIRQFVPIKVEQIEAGTPGRLRVVAQSTNSEEIIEGE 283 ++R +D K G H+ H V ++E G G +V + Sbjct: 1898853 IVRTTLEDAMAKEGVHLRPHS----------NVARVELGADGTKTLVLTDGSKYS----G 1898990 Query: 284 YNTVMLAIGRDACTRKIGLETVGVKINEKTGKIPVTDEEQTNVPYIYAIGDILEDKVELT 343 Y+ V+ A GR T + L+ G+ +E G IPV + ++T+ + A+GD+ LT Sbjct: 1898991 YDVVIYAAGRVPLTSNLQLDKAGITTDEH-GFIPVNELQETSNSKVLAVGDVCGTPA-LT 1899164 Query: 344 PVAIQAGRLLAQRLYAG-STVKCDYENVPTTVFTPLEYGACGLSEEKAVEKFGEENIEVY 402 PVAI AGR L+ RL+ G + K YEN+PT VF+ G GL+EE+A K+G++ I+VY Sbjct: 1899165 PVAIAAGRRLSDRLFGGMNDAKVSYENIPTVVFSHPPIGTIGLTEEQARRKYGDDAIKVY 1899344 Query: 403 HSYFWPL---------EWTIPSRDNNKCYAKIICNTKDNERVVGFHVLGPNAGEVTQGFA 453 S F + E T +D K K++C K+ E+VVG H++G A E+ QGF Sbjct: 1899345 TSRFVNMYYGLINEVDESTGEPKDKPKTAMKLVCAGKE-EKVVGLHMIGMAADEILQGFG 1899521 Query: 454 AALKCGLTKKQLDSTIGIHPVCAEVFTTLSVTKRSGAS 491 A+K G TK D+ I IHP E TL+ SG S Sbjct: 1899522 VAVKMGATKADFDNCIAIHPTAGEELVTLAPWGLSGRS 1899635 Score = 52.0 bits (123), Expect(2) = 7e-41, Method: Composition-based stats. Identities = 27/57 (47%), Positives = 33/57 (57%), Gaps = 1/57 (1%) Frame = +1 Query: 174 KEYCISSDDLFSLPYCPGKTLVVGASYVALECAGFLAGIGLDVTVMVRSI-LLRGFD 229 KE CI SD F L P K VVGA Y+A+E AG L +G D ++ R +LR FD Sbjct: 1898617 KELCIDSDGFFELETLPKKVAVVGAGYIAVELAGVLNALGSDTSLFCRKEGVLRAFD 1898787 Score = 49.3 bits (116), Expect = 4e-05, Method: Composition-based stats. Identities = 29/70 (41%), Positives = 39/70 (55%), Gaps = 8/70 (11%) Frame = +2 Query: 55 LGGTCVNVGCIPKKLMHQAALLGQALQ-DSRNYGWKVEETVKH-------DWDRMIEAVQ 106 LGGTCVNVGC+PKKLM AA + L+ D +YG++ E T H DW ++ Sbjct: 1898081 LGGTCVNVGCVPKKLMFIAADMSHKLRHDLLHYGFEDEATGGHLGKRTHFDWPKLKAGRD 1898260 Query: 107 NHIGSLNWGY 116 ++ LN Y Sbjct: 1898261 AYVLRLNGIY 1898290 >supercont1.37 of Phytophthora infestans Length = 1588622 Score = 140 bits (352), Expect = 2e-32, Method: Composition-based stats. Identities = 121/437 (27%), Positives = 209/437 (47%), Gaps = 8/437 (1%) Frame = -2 Query: 51 TRWGLGGTCVNVGCIPKK-LMHQAALLGQALQDSRNYGWKVEETVKHDWDRMIEAVQNHI 109 +R LGGTC+NVGCIP K L+H LL A D ++YG E VK ++ +M+++ + + Sbjct: 56131 SRGKLGGTCLNVGCIPSKALLHSTHLLHTAQHDFKSYGIDAPE-VKANFPQMMKSKEKAV 55955 Query: 110 GSLNWGYRVALREKKVVYENAYGQFI--GPHRIKATNNKGKEKIYSAERFLIATGERPRY 167 +L G ++ KV Y +G+ G + +NKG E + A+ +IATG Sbjct: 55954 KTLTGGIESLFKKNKVTYIKGHGKISAQGEISVALNDNKGNETV-KAKNIIIATGSEVTP 55778 Query: 168 L-GIPGDKEY--CISSDDLFSLPYCPGKTLVVGASYVALECAGFLAGIGLDVTVM-VRSI 223 L +P D I S L P +VVGA + LE +G VTV+ Sbjct: 55777 LPPVPVDNAAGKIIDSTGALELKRVPEHLVVVGAGVIGLELGSVYKRLGAKVTVVEFLDA 55598 Query: 224 LLRGFDQDMANKIGEHMEEHGIKFIRQF-VPIKVEQIEAGTPGRLRVVAQSTNSEEIIEG 282 G D++ + + +++ G+ F QF + ++ +++ + + + Sbjct: 55597 ACPGSDKEAVKEFTKLLKKQGLDF--QFNTKVTASEVNGDV---VKLTTEPSKGGDASSI 55433 Query: 283 EYNTVMLAIGRDACTRKIGLETVGVKINEKTGKIPVTDEEQTNVPYIYAIGDILEDKVEL 342 E +TV++A GR A T +GLE +G++ +K G+I V D +T VP I+AIGD+++ + L Sbjct: 55432 ECDTVLVATGRRAFTSGLGLEQMGIQ-TDKLGRIEVDDAFRTQVPGIFAIGDVIKGAM-L 55259 Query: 343 TPVAIQAGRLLAQRLYAGSTVKCDYENVPTTVFTPLEYGACGLSEEKAVEKFGEENIEVY 402 A + G + + AG +Y +P ++T E+ + G +EE+ + E N+ + Sbjct: 55258 AHKAEEEGIACVENI-AGKHGHVNYGAIPGVIYTFPEFASVGKTEEELKAEGIEYNVGKF 55082 Query: 403 HSYFWPLEWTIPSRDNNKCYAKIICNTKDNERVVGFHVLGPNAGEVTQGFAAALKCGLTK 462 TI D K++ + K ++++G H++ NAGE+ ++ G Sbjct: 55081 PMMANSRARTIAEADG---LVKVLADKK-TDKLLGVHIIAGNAGEMIAEGVIGIEYGAAS 54914 Query: 463 KQLDSTIGIHPVCAEVF 479 + L T HP +E F Sbjct: 54913 EDLARTCHAHPTLSEAF 54863 >supercont1.92 of Phytophthora infestans Length = 551618 Score = 77.4 bits (189), Expect = 2e-13, Method: Composition-based stats. Identities = 57/197 (28%), Positives = 100/197 (50%) Frame = -1 Query: 283 EYNTVMLAIGRDACTRKIGLETVGVKINEKTGKIPVTDEEQTNVPYIYAIGDILEDKVEL 342 E +TV++A GR A T +GLE +G++ +K G+I V D +T VP I+AIGD+++ + L Sbjct: 230588 ECDTVLVATGRRAFTSGLGLEQMGIQ-TDKLGRIEVDDAFRTQVPGIFAIGDVIKGAM-L 230415 Query: 343 TPVAIQAGRLLAQRLYAGSTVKCDYENVPTTVFTPLEYGACGLSEEKAVEKFGEENIEVY 402 A + G + + AG +Y +P ++T E+ + G +EE+ + E N+ + Sbjct: 230414 AHKAEEEGIACVENI-AGKHGHVNYGAIPGVIYTFPEFASVGKTEEELKAEGIEYNVGKF 230238 Query: 403 HSYFWPLEWTIPSRDNNKCYAKIICNTKDNERVVGFHVLGPNAGEVTQGFAAALKCGLTK 462 TI D K++ + K ++++G H++ NAGE+ ++ G Sbjct: 230237 PMMANSRARTIAEADG---LVKVLADKK-TDKLLGVHIIAGNAGEMIAEGVIGIEYGAAS 230070 Query: 463 KQLDSTIGIHPVCAEVF 479 + L T HP +E F Sbjct: 230069 EDLARTCHAHPTLSEAF 230019 Score = 73.6 bits (179), Expect = 2e-12, Method: Composition-based stats. Identities = 55/169 (32%), Positives = 83/169 (49%), Gaps = 6/169 (3%) Frame = -3 Query: 51 TRWGLGGTCVNVGCIPKK-LMHQAALLGQALQDSRNYGWKVEETVKHDWDRMIEAVQNHI 109 +R LGGTC+NVGCIP K L+H LL A D ++YG E VK ++ +M+++ + + Sbjct: 231288 SRGKLGGTCLNVGCIPSKALLHSTHLLHTAQHDFKSYGIDAPE-VKANFPQMMKSKEKAV 231112 Query: 110 GSLNWGYRVALREKKVVYENAYGQFI--GPHRIKATNNKGKEKIYSAERFLIATGERPRY 167 +L G + ++ KV Y +G+ G + +NKG E + A+ +IATG Sbjct: 231111 KTLTGGIELLFKKNKVTYIKGHGKISAQGEISVALNDNKGNETV-KAKNIIIATGSEVTP 230935 Query: 168 L-GIPGDKEY--CISSDDLFSLPYCPGKTLVVGASYVALECAGFLAGIG 213 L +P D I S L P +VVGA + LE +G Sbjct: 230934 LPPVPVDNAAGKIIDSTGALELKRVPEHLVVVGAGVIGLELGSVYKRLG 230788 >supercont1.91 of Phytophthora infestans Length = 525183 Score = 50.1 bits (118), Expect = 3e-05, Method: Composition-based stats. Identities = 58/233 (24%), Positives = 92/233 (39%), Gaps = 21/233 (9%) Frame = +2 Query: 8 PKSYDYDLIIIXXXXXXXXXXXXXXXXXXXVMVLDFVTPTPLGTRWGLGGTCVNVGCIPK 67 P+ YDL++I V ++D T LGG CV+ G IP Sbjct: 92573 PQVAAYDLVVIGSGPSATQCALESAKQGKRVAIVDKKTR--------LGGVCVHTGTIPS 92728 Query: 68 KLMHQAALLGQALQDSRNYG--WKVEETVKHDWDRMIEAVQNHIGSLNWGYRVALREKKV 125 K +A L + YG + ++ D ++ VQ + S R L+ +V Sbjct: 92729 KTFREAVLHLSGYRHHGFYGKSYSMKTVTIED---ILYRVQRVVSSEEDVVRAQLKAARV 92899 Query: 126 VYENAYGQFIGPHRIKATNNKGKEKIYS---------------AERFLIATGERPRYLG- 169 + +F H I ++ +K S A++FLIA G RP + Sbjct: 92900 DVVPGFARFENEHEISIVRDEDDKKKNSSVTGRSNVDSLSRIKADKFLIACGTRPAHNPL 93079 Query: 170 IPGDKEYCISSDDLFS--LPYCPGKTLVVGASYVALECAGFLAGI-GLDVTVM 219 IP D + I SD + S + P +V+GA + +E A + + G VTV+ Sbjct: 93080 IPIDGKVVIDSDQILSRDMHQLPRSLIVLGAGVIGMEYASMVNVVPGHTVTVV 93238 >supercont1.130 of Phytophthora infestans Length = 314235 Score = 48.5 bits (114), Expect = 9e-05, Method: Composition-based stats. Identities = 40/159 (25%), Positives = 74/159 (46%) Frame = -1 Query: 321 EEQTNVPYIYAIGDILEDKVELTPVAIQAGRLLAQRLYAGSTVKCDYENVPTTVFTPLEY 380 E +VP I+AIGD+++ + L A + G + + AG +Y +P ++T E+ Sbjct: 50973 ERIKSVPGIFAIGDVIKGAM-LAHKAEEEGIACVENI-AGKHGHVNYGAIPGVIYTFPEF 50800 Query: 381 GACGLSEEKAVEKFGEENIEVYHSYFWPLEWTIPSRDNNKCYAKIICNTKDNERVVGFHV 440 + G +EE+ + E N+ + TI D K++ + K ++++G H+ Sbjct: 50799 ASVGKTEEELKAEGIEYNVGKFPMMANSRARTIAEADG---LVKVLADKK-TDKLLGVHI 50632 Query: 441 LGPNAGEVTQGFAAALKCGLTKKQLDSTIGIHPVCAEVF 479 + NAGE+ ++ G + L T HP +E F Sbjct: 50631 IAGNAGEMIAEGVIGIEYGAASEDLARTCHAHPTLSEAF 50515 >supercont1.38 of Phytophthora infestans Length = 1642046 Score = 33.1 bits (74), Expect = 3.4, Method: Composition-based stats. Identities = 18/56 (32%), Positives = 27/56 (48%) Frame = -3 Query: 45 TPTPLGTRWGLGGTCVNVGCIPKKLMHQAALLGQALQDSRNYGWKVEETVKHDWDR 100 +P P + TCV V +P+ L AA+ Q+ + S YG+ + KH W R Sbjct: 666579 SPPPSTLPLEVDCTCVRV--LPQSLTSTAAMATQSSKQSSKYGYSLNFDWKHPWPR 666418 >supercont1.1 of Phytophthora infestans Length = 6928287 Score = 33.1 bits (74), Expect = 3.7, Method: Composition-based stats. Identities = 26/84 (30%), Positives = 40/84 (47%), Gaps = 2/84 (2%) Frame = +2 Query: 155 ERFLIATGERPRYLGIPG-DKEYCISSDDLFSLPYCPG-KTLVVGASYVALECAGFLAGI 212 ++ +IATG PR L IPG D +S D+ G K ++GA + + A FLA + Sbjct: 3667655 DKVVIATGVLPRALKIPGADHPKVLSYLDVLKNKAPVGNKVAIIGAGGIGFDVAEFLAHV 3667834 Query: 213 GLDVTVMVRSILLRGFDQDMANKI 236 G + V + R + D N + Sbjct: 3667835 GESTSSSV-DVFAREWGIDTTNSV 3667903 TBLASTN 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= SPP00000035_1.0 # Prot # Thioredoxin reductase 2 (TR2) # Hs (524 letters) Database: genome.fa 4921 sequences; 228,543,505 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value supercont1.62 of Phytophthora infestans 464 e-130 supercont1.32 of Phytophthora infestans 243 1e-63 supercont1.28 of Phytophthora infestans 140 2e-49 supercont1.37 of Phytophthora infestans 144 2e-33 supercont1.92 of Phytophthora infestans 83 3e-15 supercont1.2 of Phytophthora infestans 82 8e-15 supercont1.130 of Phytophthora infestans 62 7e-09 supercont1.91 of Phytophthora infestans 51 1e-05 supercont1.538 of Phytophthora infestans 33 5.2 >supercont1.62 of Phytophthora infestans Length = 695754 Score = 464 bits (1195), Expect = e-130, Method: Composition-based stats. Identities = 242/488 (49%), Positives = 329/488 (67%), Gaps = 13/488 (2%) Frame = -2 Query: 39 DYDXXXXXXXXXXXACAKEAAQLGRKVAVVDYVEPSPQGTRWGLGGTCVNVGCIPKKLMH 98 DYD AC+KEAA G+KV V+DYV+PSPQGT WGLGGTCVNVGCIPKKLMH Sbjct: 397490 DYDLVVIGGGSGGLACSKEAASFGQKVCVLDYVKPSPQGTSWGLGGTCVNVGCIPKKLMH 397311 Query: 99 QAALLGGLI-QDAPNYGWEVAQ-----PVPHDWRKMAEAVQNHVKSLNWGHRVQLQDRKV 152 Q++L+G ++ D+ ++GW V+ P+ DW+++ V +++ +N+ ++V+L+ + V Sbjct: 397310 QSSLIGEVLHHDSASFGWNVSSGQGSAPI-FDWKQLVTNVDGYIRGINFKYKVELRSKYV 397134 Query: 153 KYFNIKASFVDEHT--VCGVAKGGKEILLSADHIIIATGGRPRYPTHIEGALEYGITSDD 210 KY N SF+D HT + KG K+I + ++IA GGRPR T I G E+ I+SDD Sbjct: 397133 KYENFLGSFIDPHTLELWHPRKGSKQI--TTRDVVIAVGGRPRELT-IPGG-EHAISSDD 396966 Query: 211 IFWLK-ESPGKTLVVGASYVALECAGFLTGIGLDTTIMMRSIPLRGFDQQMSSMVIEHM- 268 IFW+K + PGKTLVVGASYVALECAGFL G+G D +M+RSI LRGFDQ M++ + E+M Sbjct: 396965 IFWMKTKEPGKTLVVGASYVALECAGFLKGMGYDVKVMVRSILLRGFDQDMANKIGEYME 396786 Query: 269 ASHGTRFLRGCAPSRVRRLPDGQLQVTWEDSTTGKEDTGTFDTVLWAIGRVPDTRSLNLE 328 G F+R P + +L +GQL V W S G+ FD+VL A GR PD L+L+ Sbjct: 396785 VQSGIEFIRKTVPQSITKLENGQLLVKWT-SEDGESCEEAFDSVLNATGRDPDIAKLDLD 396609 Query: 329 KAGVDTSPDTQKILVDSREATSVPHIYAIGDVVEGRPELTPIAIMAGRLLVQRLFGGSSD 388 KAGV + T +I V E TS P+IYAIGDV++ PELTP+AI AGRLL +RL+ ++ Sbjct: 396608 KAGVKLNEKTGRIWV-KHEQTSTPNIYAIGDVIDA-PELTPVAIQAGRLLSRRLYNNATV 396435 Query: 389 LMDYDNVPTTVFTPLEYGCVGLSEEEAVARHGQEHVEVYHAHYKPLEFTVAGRD---ASQ 445 MDYD V T VFTP+EYGC GLSEE+++ R G++ +EVYH ++ PLE++++ A Sbjct: 396434 QMDYDKVCTAVFTPIEYGCCGLSEEDSIKRFGKDKIEVYHTNFVPLEWSLSTETRAAAES 396255 Query: 446 CYVKMVCLREPPQLVLGLHFLGPNAGEVTQGFALGIKCGASYAQVMRTVGIHPTCSEEVV 505 CYVK++C R + V+G H+LGPNAGEVTQ L +K G +Y Q++ TVGIHPT +E Sbjct: 396254 CYVKVICDRIRDKFVVGFHYLGPNAGEVTQAMGLAMKLGFTYDQMVDTVGIHPTTAESFT 396075 Query: 506 KLRISKRS 513 L ++K S Sbjct: 396074 TLEVTKSS 396051 >supercont1.32 of Phytophthora infestans Length = 1926061 Score = 243 bits (621), Expect = 1e-63, Method: Composition-based stats. Identities = 172/478 (35%), Positives = 250/478 (52%), Gaps = 10/478 (2%) Frame = +2 Query: 40 YDXXXXXXXXXXXACAKEAAQLGRKVAVVDYVEPSPQGTRWGLGGTCVNVGCIPKKLMHQ 99 YD A A+ AA G KV VV E + GLGGTCVN GC+PKK+M Sbjct: 581996 YDYMVIGGGSGGMASARRAATYGAKVLVV---ERGREFDGMGLGGTCVNFGCVPKKVMFN 582166 Query: 100 AALLGGLIQDAPNYGWEVAQPV----PHDWRKMAEAVQNHVKSLNWGHRVQLQDRKVKYF 155 AA + +Y A DW M ++K LN + L + KV + Sbjct: 582167 AAAHVEHLNRNKDYSINTASKDFEFGDFDWANMKTKRDAYIKRLNGIYERNLGNAKVDHV 582346 Query: 156 NIKASFV--DEHTVCGVAKGGKEILLSADHIIIATGGRPRYPTHIEGALEYGITSDDIFW 213 A V D+ V G GK H+++A GG P P + G +E+ I SD F Sbjct: 582347 QGIAKLVAKDKIEVAGQVYTGK-------HVLVAPGGTPTVPD-LPG-MEHVIDSDGFFK 582499 Query: 214 LKESPGKTLVVGASYVALECAGFLTGIGLDTTIMMR-SIPLRGFDQQMSSMVIEHMASHG 272 L++ P K VVGA Y+A+E AG + DTT+ R LR FD + +V E M G Sbjct: 582500 LEQQPKKVAVVGAGYIAVELAGIFNVLKSDTTLFCRFDQVLRKFDPIVRDLVNEEMEKAG 582679 Query: 273 TRFLRGCAPSRVRRLPDGQLQVTWEDSTTGKEDTGT-FDTVLWAIGRVPDTRSLNLEKAG 331 F+R RV + +G+L T+ + G+E T FD++++AIGR P T+ L LE+ G Sbjct: 582680 VNFVRNSRAVRVEKQDNGKL--TYVVTVDGEEQKFTDFDSIVYAIGRSPRTKDLGLEEVG 582853 Query: 332 VDTSPDTQKILVDSREATSVPHIYAIGDVVEGRPELTPIAIMAGRLLVQRLFGGSSD-LM 390 V + + I VD++E TSV +YAIGD ELTP+AI AGR L RLFGG D + Sbjct: 582854 VKLA-EGGFIEVDAQENTSVAGVYAIGDATVTGWELTPVAIAAGRRLSDRLFGGEKDACL 583030 Query: 391 DYDNVPTTVFTPLEYGCVGLSEEEAVARHGQEHVEVYHAHYKPLEFTVAGRD-ASQCYVK 449 +Y +PT +F+ G +G +E EA+A++G+E+V+VY + + L ++A + + +K Sbjct: 583031 NYHQIPTVIFSHPPIGTIGYTEPEAIAKYGEENVKVYSSKFVNLIHSMADPERKGKTAMK 583210 Query: 450 MVCLREPPQLVLGLHFLGPNAGEVTQGFALGIKCGASYAQVMRTVGIHPTCSEEVVKL 507 +V + + + V+G+H G A E+ QGF + +K A+ A V IHPT +EE+V + Sbjct: 583211 LVTVGD-KETVVGVHVAGEGADEMIQGFGVAVKMNATKADFDNIVAIHPTAAEELVTM 583381 >supercont1.28 of Phytophthora infestans Length = 2122445 Score = 140 bits (353), Expect(3) = 2e-49, Method: Composition-based stats. Identities = 92/250 (36%), Positives = 139/250 (55%), Gaps = 10/250 (4%) Frame = +3 Query: 268 MASHGTRFLRGCAPSRVRRLPDGQLQVTWEDSTTGKEDTGTFDTVLWAIGRVPDTRSLNL 327 MA G +RV DG + D G + +G +D V++A GRVP T +L L Sbjct: 1898880 MAKEGVHLRPHSNVARVELGADGTKTLVLTD---GSKYSG-YDVVIYAAGRVPLTSNLQL 1899047 Query: 328 EKAGVDTSPDTQKILVDSREATSVPHIYAIGDVVEGRPELTPIAIMAGRLLVQRLFGGSS 387 +KAG+ T+ + I V+ + TS + A+GDV G P LTP+AI AGR L RLFGG + Sbjct: 1899048 DKAGI-TTDEHGFIPVNELQETSNSKVLAVGDVC-GTPALTPVAIAAGRRLSDRLFGGMN 1899221 Query: 388 DL-MDYDNVPTTVFTPLEYGCVGLSEEEAVARHGQEHVEVYHAHYKPL---------EFT 437 D + Y+N+PT VF+ G +GL+EE+A ++G + ++VY + + + E T Sbjct: 1899222 DAKVSYENIPTVVFSHPPIGTIGLTEEQARRKYGDDAIKVYTSRFVNMYYGLINEVDEST 1899401 Query: 438 VAGRDASQCYVKMVCLREPPQLVLGLHFLGPNAGEVTQGFALGIKCGASYAQVMRTVGIH 497 +D + +K+VC + ++V GLH +G A E+ QGF + +K GA+ A + IH Sbjct: 1899402 GEPKDKPKTAMKLVCAGKEEKVV-GLHMIGMAADEILQGFGVAVKMGATKADFDNCIAIH 1899578 Query: 498 PTCSEEVVKL 507 PT EE+V L Sbjct: 1899579 PTAGEELVTL 1899608 Score = 52.4 bits (124), Expect(3) = 2e-49, Method: Composition-based stats. Identities = 59/203 (29%), Positives = 82/203 (40%), Gaps = 44/203 (21%) Frame = +2 Query: 37 QRDYDXXXXXXXXXXXACAKEAAQL-GRKVAVVDYVEPSPQGTRWGLGGTCVNVGCIPKK 95 Q +YD A A+ AA G +VAVV+ LGGTCVNVGC+PKK Sbjct: 1897970 QTEYDYLVIGAGSGGMASARRAASYPGTRVAVVEQAR---------LGGTCVNVGCVPKK 1898122 Query: 96 LMHQAALLG-GLIQDAPNYGWE-------VAQPVPHDWRKMAEAVQNHVKSLN------- 140 LM AA + L D +YG+E + + DW K+ +V LN Sbjct: 1898123 LMFIAADMSHKLRHDLLHYGFEDEATGGHLGKRTHFDWPKLKAGRDAYVLRLNGIYER*R 1898302 Query: 141 ----------------------------WGHRVQLQDRKVKYFNIKASFVDEHTVCGVAK 172 + R L + KV+ A+F ++ V Sbjct: 1898303 IDEGISTTVEKATNRCNVNGDIILMLLLYASR-NLANSKVELIRGLATFNEKGN---VEV 1898470 Query: 173 GGKEILLSADHIIIATGGRPRYP 195 GGKE+L A +++IA GG+P P Sbjct: 1898471 GGKELL--AKNVLIAVGGKPLIP 1898533 Score = 46.2 bits (108), Expect(3) = 2e-49, Method: Composition-based stats. Identities = 26/56 (46%), Positives = 32/56 (57%), Gaps = 1/56 (1%) Frame = +1 Query: 203 EYGITSDDIFWLKESPGKTLVVGASYVALECAGFLTGIGLDTTIMMRSIP-LRGFD 257 E I SD F L+ P K VVGA Y+A+E AG L +G DT++ R LR FD Sbjct: 1898620 ELCIDSDGFFELETLPKKVAVVGAGYIAVELAGVLNALGSDTSLFCRKEGVLRAFD 1898787 >supercont1.37 of Phytophthora infestans Length = 1588622 Score = 144 bits (362), Expect = 2e-33, Method: Composition-based stats. Identities = 144/470 (30%), Positives = 212/470 (45%), Gaps = 6/470 (1%) Frame = -2 Query: 39 DYDXXXXXXXXXXXACAKEAAQLGRKVAVVDYVEPSPQGTRWGLGGTCVNVGCIPKK-LM 97 DYD A +AAQLG K A ++ +R LGGTC+NVGCIP K L+ Sbjct: 56224 DYDVVVIGGGPGGYVAAIKAAQLGMKTACIE--------SRGKLGGTCLNVGCIPSKALL 56069 Query: 98 HQAALLGGLIQDAPNYGWEVAQPVPHDWRKMAEAVQNHVKSLNWGHRVQLQDRKVKYF-- 155 H LL D +YG + A V ++ +M ++ + VK+L G + KV Y Sbjct: 56068 HSTHLLHTAQHDFKSYGID-APEVKANFPQMMKSKEKAVKTLTGGIESLFKKNKVTYIKG 55892 Query: 156 NIKASFVDEHTVCGVAKGGKEILLSADHIIIATGGR--PRYPTHIEGALEYGITSDDIFW 213 + K S E +V G E + A +IIIATG P P ++ A I S Sbjct: 55891 HGKISAQGEISVALNDNKGNETV-KAKNIIIATGSEVTPLPPVPVDNAAGKIIDSTGALE 55715 Query: 214 LKESPGKTLVVGASYVALECAGFLTGIGLDTTIM-MRSIPLRGFDQQMSSMVIEHMASHG 272 LK P +VVGA + LE +G T++ G D++ + + G Sbjct: 55714 LKRVPEHLVVVGAGVIGLELGSVYKRLGAKVTVVEFLDAACPGSDKEAVKEFTKLLKKQG 55535 Query: 273 TRFLRGCAPSRVRRLPDGQLQVTWEDSTTGKEDTGTFDTVLWAIGRVPDTRSLNLEKAGV 332 F + + +++T E S G + DTVL A GR T L LE+ G+ Sbjct: 55534 LDFQFNTKVT-ASEVNGDVVKLTTEPSKGGDASSIECDTVLVATGRRAFTSGLGLEQMGI 55358 Query: 333 DTSPDTQKILVDSREATSVPHIYAIGDVVEGRPELTPIAIMAGRLLVQRLFGGSSDLMDY 392 T +I VD T VP I+AIGDV++G L A G V+ + G ++Y Sbjct: 55357 QTD-KLGRIEVDDAFRTQVPGIFAIGDVIKG-AMLAHKAEEEGIACVENI-AGKHGHVNY 55187 Query: 393 DNVPTTVFTPLEYGCVGLSEEEAVARHGQEHVEVYHAHYKPLEFTVAGRDASQCYVKMVC 452 +P ++T E+ VG +EEE A + +V + T+A D VK++ Sbjct: 55186 GAIPGVIYTFPEFASVGKTEEELKAEGIEYNVGKFPMMANSRARTIAEADG---LVKVLA 55016 Query: 453 LREPPQLVLGLHFLGPNAGEVTQGFALGIKCGASYAQVMRTVGIHPTCSE 502 ++ +L LG+H + NAGE+ +GI+ GA+ + RT HPT SE Sbjct: 55015 DKKTDKL-LGVHIIAGNAGEMIAEGVIGIEYGAASEDLARTCHAHPTLSE 54869 >supercont1.92 of Phytophthora infestans Length = 551618 Score = 83.2 bits (204), Expect = 3e-15, Method: Composition-based stats. Identities = 70/211 (33%), Positives = 105/211 (49%) Frame = -1 Query: 292 LQVTWEDSTTGKEDTGTFDTVLWAIGRVPDTRSLNLEKAGVDTSPDTQKILVDSREATSV 351 +++T E S G + DTVL A GR T L LE+ G+ T +I VD T V Sbjct: 230636 VKLTTEPSKGGDASSIECDTVLVATGRRAFTSGLGLEQMGIQTD-KLGRIEVDDAFRTQV 230460 Query: 352 PHIYAIGDVVEGRPELTPIAIMAGRLLVQRLFGGSSDLMDYDNVPTTVFTPLEYGCVGLS 411 P I+AIGDV++G L A G V+ + G ++Y +P ++T E+ VG + Sbjct: 230459 PGIFAIGDVIKG-AMLAHKAEEEGIACVENI-AGKHGHVNYGAIPGVIYTFPEFASVGKT 230286 Query: 412 EEEAVARHGQEHVEVYHAHYKPLEFTVAGRDASQCYVKMVCLREPPQLVLGLHFLGPNAG 471 EEE A + +V + T+A D VK++ ++ +L LG+H + NAG Sbjct: 230285 EEELKAEGIEYNVGKFPMMANSRARTIAEADG---LVKVLADKKTDKL-LGVHIIAGNAG 230118 Query: 472 EVTQGFALGIKCGASYAQVMRTVGIHPTCSE 502 E+ +GI+ GA+ + RT HPT SE Sbjct: 230117 EMIAEGVIGIEYGAASEDLARTCHAHPTLSE 230025 Score = 75.5 bits (184), Expect = 6e-13, Method: Composition-based stats. Identities = 69/208 (33%), Positives = 95/208 (45%), Gaps = 5/208 (2%) Frame = -3 Query: 39 DYDXXXXXXXXXXXACAKEAAQLGRKVAVVDYVEPSPQGTRWGLGGTCVNVGCIPKK-LM 97 DYD A +AAQLG K A ++ +R LGGTC+NVGCIP K L+ Sbjct: 231381 DYDVVVIGGGPGGYVAAIKAAQLGMKTACIE--------SRGKLGGTCLNVGCIPSKALL 231226 Query: 98 HQAALLGGLIQDAPNYGWEVAQPVPHDWRKMAEAVQNHVKSLNWGHRVQLQDRKVKYF-- 155 H LL D +YG + A V ++ +M ++ + VK+L G + + KV Y Sbjct: 231225 HSTHLLHTAQHDFKSYGID-APEVKANFPQMMKSKEKAVKTLTGGIELLFKKNKVTYIKG 231049 Query: 156 NIKASFVDEHTVCGVAKGGKEILLSADHIIIATGGR--PRYPTHIEGALEYGITSDDIFW 213 + K S E +V G E + A +IIIATG P P ++ A I S Sbjct: 231048 HGKISAQGEISVALNDNKGNET-VKAKNIIIATGSEVTPLPPVPVDNAAGKIIDSTGALE 230872 Query: 214 LKESPGKTLVVGASYVALECAGFLTGIG 241 LK P +VVGA + LE +G Sbjct: 230871 LKRVPEHLVVVGAGVIGLELGSVYKRLG 230788 >supercont1.2 of Phytophthora infestans Length = 5928454 Score = 81.6 bits (200), Expect = 8e-15, Method: Composition-based stats. Identities = 63/183 (34%), Positives = 94/183 (51%), Gaps = 5/183 (2%) Frame = -1 Query: 178 LLSADHIIIATGGRPRYPTHIEGALEYGITSDDIFW--LKESPGKTLVVGASYVALECAG 235 +L+AD ++ G RP I E SD + W +K P + ++VGA V +E A Sbjct: 4157329 VLTADKFLVCVGTRPARRPDIPFDGETIFDSDQLLWGNVKSVPRRLIIVGAGVVGMEYAS 4157150 Query: 236 FLTGI-GLDTTIM-MRSIPLRGFDQQMSSMVIEHMASHGTRFLRGCAPSRVRRLPDGQLQ 293 +T I G D T++ R L D+Q+S + MA GTRFL G V + P G++ Sbjct: 4157149 MMTIIPGTDVTVIDGRQEILNMADKQVSEALCYSMAQTGTRFLTGETIKSVEKSPKGEVF 4156970 Query: 294 VTWEDSTTGKEDTGTFDTVLWAIGRVPDTRSLNLEKAGVDTSPDTQ-KILVDSREATSVP 352 E +GK G D +L+ +GR + LNLE G+ +PD + +I VD+ T+VP Sbjct: 4156969 AHLE---SGKTVVG--DGLLYTVGRQGNVEGLNLEAVGL--APDKRGRIKVDNNFQTAVP 4156811 Query: 353 HIY 355 H+Y Sbjct: 4156810 HMY 4156802 Score = 32.3 bits (72), Expect = 5.9, Method: Composition-based stats. Identities = 16/43 (37%), Positives = 25/43 (58%) Frame = -1 Query: 54 CAKEAAQLGRKVAVVDYVEPSPQGTRWGLGGTCVNVGCIPKKL 96 CA ++A+ G+ VA++D R LGG CV+ G +P K+ Sbjct: 4157866 CAIDSAKHGKSVAIID--------KRDMLGGVCVHTGTVPSKV 4157762 >supercont1.130 of Phytophthora infestans Length = 314235 Score = 62.0 bits (149), Expect = 7e-09, Method: Composition-based stats. Identities = 50/153 (32%), Positives = 78/153 (50%) Frame = -1 Query: 350 SVPHIYAIGDVVEGRPELTPIAIMAGRLLVQRLFGGSSDLMDYDNVPTTVFTPLEYGCVG 409 SVP I+AIGDV++G L A G V+ + G ++Y +P ++T E+ VG Sbjct: 50961 SVPGIFAIGDVIKG-AMLAHKAEEEGIACVENI-AGKHGHVNYGAIPGVIYTFPEFASVG 50788 Query: 410 LSEEEAVARHGQEHVEVYHAHYKPLEFTVAGRDASQCYVKMVCLREPPQLVLGLHFLGPN 469 +EEE A + +V + T+A D VK++ ++ +L LG+H + N Sbjct: 50787 KTEEELKAEGIEYNVGKFPMMANSRARTIAEADG---LVKVLADKKTDKL-LGVHIIAGN 50620 Query: 470 AGEVTQGFALGIKCGASYAQVMRTVGIHPTCSE 502 AGE+ +GI+ GA+ + RT HPT SE Sbjct: 50619 AGEMIAEGVIGIEYGAASEDLARTCHAHPTLSE 50521 >supercont1.91 of Phytophthora infestans Length = 525183 Score = 51.2 bits (121), Expect = 1e-05, Method: Composition-based stats. Identities = 70/278 (25%), Positives = 105/278 (37%), Gaps = 39/278 (14%) Frame = +2 Query: 40 YDXXXXXXXXXXXACAKEAAQLGRKVAVVDYVEPSPQGTRWGLGGTCVNVGCIPKKLMHQ 99 YD CA E+A+ G++VA+VD + TR LGG CV+ G IP K + Sbjct: 92588 YDLVVIGSGPSATQCALESAKQGKRVAIVD------KKTR--LGGVCVHTGTIPSKTFRE 92743 Query: 100 AALLGGLIQDAPNYGWEVAQPVPHDWRKMAEAVQNHVKSLNWGHRVQLQDRKVKYFNIKA 159 A L + YG + + VQ V S R QL+ +V A Sbjct: 92744 AVLHLSGYRHHGFYGKSYSMKTV-TIEDILYRVQRVVSSEEDVVRAQLKAARVDVVPGFA 92920 Query: 160 SFVDEH---------------TVCGVAKGGKEILLSADHIIIATGGRPRYPTHIEGALEY 204 F +EH +V G + + AD +IA G RP + I + Sbjct: 92921 RFENEHEISIVRDEDDKKKNSSVTGRSNVDSLSRIKADKFLIACGTRPAHNPLIPIDGKV 93100 Query: 205 GITSDDIFW--LKESPGKTLVVGASYVALECAGFLTGIGLDTTIMMRSIP---------- 252 I SD I + + P +V+GA + +E A + + T ++ P Sbjct: 93101 VIDSDQILSRDMHQLPRSLIVLGAGVIGMEYASMVNVVPGHTVTVVDGRPDVSVFKYNKG 93280 Query: 253 ------------LRGFDQQMSSMVIEHMASHGTRFLRG 278 L D+++ S + M S+G RFL G Sbjct: 93281 KGRY*VDCCTQILSFCDREIISNLTYEMQSNGARFLLG 93394 Score = 30.8 bits (68), Expect(2) = 0.067, Method: Composition-based stats. Identities = 40/167 (23%), Positives = 68/167 (40%), Gaps = 6/167 (3%) Frame = +3 Query: 355 YAIGDVVEGRPELTPIAIMAGRLLVQRLFGGSSDL-----MDYDNVPTTVFTPLEYGCVG 409 YA GD + G P L ++ GRL ++ +L ++ N P ++T E VG Sbjct: 93747 YAAGDCI-GAPALASTSMEQGRLASCHMWNPDEELAATSQLENGNYPYGIYTIPEISMVG 93923 Query: 410 LSEEEAVARHGQEHVEVYHAHYKPLEFTVAGRDASQCYVKMVCLREPPQL-VLGLHFLGP 468 +E++ + E+ A Y E + + L +P L V G+H +G Sbjct: 93924 QTEQQLTK--DCVNYEIGIAKYS--ELAKGQMMGAMAGGTLKILFDPDTLKVFGVHAIGE 94091 Query: 469 NAGEVTQGFALGIKCGASYAQVMRTVGIHPTCSEEVVKLRISKRSGL 515 A E+ + + G S V +PT +E R++ +GL Sbjct: 94092 GATEIIHIGQVAMAMGCSLTYFRDAVFNYPTLAE---AYRVAALNGL 94223 Score = 26.2 bits (56), Expect(2) = 0.067, Method: Composition-based stats. Identities = 16/49 (32%), Positives = 24/49 (48%) Frame = +1 Query: 310 DTVLWAIGRVPDTRSLNLEKAGVDTSPDTQKILVDSREATSVPHIYAIG 358 D +L+ +GR T LNLE G+ + I V+ T PH+ +G Sbjct: 93538 DALLYTVGRQAATDGLNLEAVGLSRN-HRGLINVNKNYQTDQPHM*VLG 93681 >supercont1.538 of Phytophthora infestans Length = 43771 Score = 32.7 bits (73), Expect = 5.2, Method: Composition-based stats. Identities = 17/43 (39%), Positives = 23/43 (53%) Frame = +3 Query: 55 AKEAAQLGRKVAVVDYVEPSPQGTRWGLGGTCVNVGCIPKKLM 97 A +++LG K +V+ R LGG C +VGCIP K M Sbjct: 6429 ALHSSRLGLKTVIVE---------RDQLGGVCTHVGCIPSKAM 6530 TBLASTN 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= SPP00000036_1.0 # Prot # Thioredoxin reductase 3 (TR3) # Hs (754 letters) Database: genome.fa 4921 sequences; 228,543,505 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value supercont1.62 of Phytophthora infestans 489 e-137 supercont1.32 of Phytophthora infestans 228 9e-59 supercont1.37 of Phytophthora infestans 132 9e-30 supercont1.28 of Phytophthora infestans 125 7e-28 supercont1.92 of Phytophthora infestans 75 8e-27 supercont1.3 of Phytophthora infestans 88 2e-16 supercont1.6 of Phytophthora infestans 82 1e-14 supercont1.4 of Phytophthora infestans 78 2e-13 supercont1.91 of Phytophthora infestans 49 9e-05 supercont1.130 of Phytophthora infestans 44 0.003 supercont1.14 of Phytophthora infestans 38 0.17 supercont1.2 of Phytophthora infestans 33 7.2 >supercont1.62 of Phytophthora infestans Length = 695754 Score = 489 bits (1260), Expect = e-137, Method: Composition-based stats. Identities = 263/568 (46%), Positives = 354/568 (62%), Gaps = 47/568 (8%) Frame = -2 Query: 223 SEITNQKTVPNIFVNKVHVGGCDQTFQAYQSGLL----QKLL------------------ 260 S T T P ++ + + VGGCD+ ++SG+ Q ++ Sbjct: 397730 SRATKHVTSPFVWSSTIFVGGCDELLAFFRSGIAVGKPQGVMPSEKQPTPSSALAPETDG 397551 Query: 261 --------------QEDLAYDYDXXXXXXXXXXXXCAKEAAILGKKVMVLDFVVPSPQGT 306 +E+ +YDYD C+KEAA G+KV VLD+V PSPQGT Sbjct: 397550 SMPDVAAETSSTAAKEEASYDYDLVVIGGGSGGLACSKEAASFGQKVCVLDYVKPSPQGT 397371 Query: 307 SWGLGGTCVNVGCIPKKLMHQAALLGQALC-DSRKFGWEYNQQVRH----NWETMTKAIQ 361 SWGLGGTCVNVGCIPKKLMHQ++L+G+ L DS FGW + +W+ + + Sbjct: 397370 SWGLGGTCVNVGCIPKKLMHQSSLIGEVLHHDSASFGWNVSSGQGSAPIFDWKQLVTNVD 397191 Query: 362 NHISSLNWGYRLSLREKAVAYVNSYGEFVEHHKIKATNKKGQETYYTAAQFVIATGERPR 421 +I +N+ Y++ LR K V Y N G F++ H ++ + + T VIA G RPR Sbjct: 397190 GYIRGINFKYKVELRSKYVKYENFLGSFIDPHTLELWHPRKGSKQITTRDVVIAVGGRPR 397011 Query: 422 YLGIQGDKEYCITSDDLFSLPYC-PGKTLVVGASYVALECAGFLAGFGLDVTVMVRSILL 480 L I G E+ I+SDD+F + PGKTLVVGASYVALECAGFL G G DV VMVRSILL Sbjct: 397010 ELTIPGG-EHAISSDDIFWMKTKEPGKTLVVGASYVALECAGFLKGMGYDVKVMVRSILL 396834 Query: 481 RGFDQEMAEKVGSYME-QHGVKFLRKFIPVMVQQLEKGSPGKLKVLAK-STEGTETIEGV 538 RGFDQ+MA K+G YME Q G++F+RK +P + +LE G ++L K ++E E+ E Sbjct: 396833 RGFDQDMANKIGEYMEVQSGIEFIRKTVPQSITKLENG-----QLLVKWTSEDGESCEEA 396669 Query: 539 YNTVLLAIGRDSCTRKIGLEKIGVKINEKSGKIPVNDVEQTNVPYVYAVGDILEDKPELT 598 +++VL A GRD K+ L+K GVK+NEK+G+I V EQT+ P +YA+GD++ D PELT Sbjct: 396668 FDSVLNATGRDPDIAKLDLDKAGVKLNEKTGRIWVKH-EQTSTPNIYAIGDVI-DAPELT 396495 Query: 599 PVAIQSGKLLAQRLFGASLEKCDYINVPTTVFTPLEYGCCGLSEEKAIEVYKKENLEIYH 658 PVAIQ+G+LL++RL+ + + DY V T VFTP+EYGCCGLSEE +I+ + K+ +E+YH Sbjct: 396494 PVAIQAGRLLSRRLYNNATVQMDYDKVCTAVFTPIEYGCCGLSEEDSIKRFGKDKIEVYH 396315 Query: 659 TLFWPLEWTVAGREN---NTCYAKIICNKFDHDRVIGFHILGPNAGEVTQGFAAAMKCGL 715 T F PLEW+++ +CY K+IC++ V+GFH LGPNAGEVTQ AMK G Sbjct: 396314 TNFVPLEWSLSTETRAAAESCYVKVICDRIRDKFVVGFHYLGPNAGEVTQAMGLAMKLGF 396135 Query: 716 TKQLLDDTIGIHPTCGEVFTTLEITKSS 743 T + DT+GIHPT E FTTLE+TKSS Sbjct: 396134 TYDQMVDTVGIHPTTAESFTTLEVTKSS 396051 >supercont1.32 of Phytophthora infestans Length = 1926061 Score = 228 bits (581), Expect = 9e-59, Method: Composition-based stats. Identities = 164/486 (33%), Positives = 238/486 (48%), Gaps = 8/486 (1%) Frame = +2 Query: 260 LQEDLAYDYDXXXXXXXXXXXXCAKEAAILGKKVMVLDFVVPSPQGTSWGLGGTCVNVGC 319 + D+ YDY A+ AA G KV+V++ + GLGGTCVN GC Sbjct: 581978 MSTDVVYDY--MVIGGGSGGMASARRAATYGAKVLVVE---RGREFDGMGLGGTCVNFGC 582142 Query: 320 IPKKLMHQAALLGQALCDSRKFGWEYNQQVRH------NWETMTKAIQNHISSLNWGYRL 373 +PKK+M AA + L +R + N + +W M +I LN Y Sbjct: 582143 VPKKVMFNAAAHVEHL--NRNKDYSINTASKDFEFGDFDWANMKTKRDAYIKRLNGIYER 582316 Query: 374 SLREKAVAYVNSYGEFVEHHKIKATNKKGQETYYTAAQFVIATGERPRYLGIQGDKEYCI 433 +L V +V + V KI+ + YT ++A G P + G E+ I Sbjct: 582317 NLGNAKVDHVQGIAKLVAKDKIEVAGQ-----VYTGKHVLVAPGGTPTVPDLPG-MEHVI 582478 Query: 434 TSDDLFSLPYCPGKTLVVGASYVALECAGFLAGFGLDVTVMVR-SILLRGFDQEMAEKVG 492 SD F L P K VVGA Y+A+E AG D T+ R +LR FD + + V Sbjct: 582479 DSDGFFKLEQQPKKVAVVGAGYIAVELAGIFNVLKSDTTLFCRFDQVLRKFDPIVRDLVN 582658 Query: 493 SYMEQHGVKFLRKFIPVMVQQLEKGSPGKLKVLAKSTEGTETIEGVYNTVLLAIGRDSCT 552 ME+ GV F+R V V EK GKL + + +G E +++++ AIGR T Sbjct: 582659 EEMEKAGVNFVRNSRAVRV---EKQDNGKLTYVV-TVDGEEQKFTDFDSIVYAIGRSPRT 582826 Query: 553 RKIGLEKIGVKINEKSGKIPVNDVEQTNVPYVYAVGDILEDKPELTPVAIQSGKLLAQRL 612 + +GLE++GVK+ E G I V+ E T+V VYA+GD ELTPVAI +G+ L+ RL Sbjct: 582827 KDLGLEEVGVKLAE-GGFIEVDAQENTSVAGVYAIGDATVTGWELTPVAIAAGRRLSDRL 583003 Query: 613 FGASLEKC-DYINVPTTVFTPLEYGCCGLSEEKAIEVYKKENLEIYHTLFWPLEWTVAGR 671 FG + C +Y +PT +F+ G G +E +AI Y +EN+++Y + F L ++A Sbjct: 583004 FGGEKDACLNYHQIPTVIFSHPPIGTIGYTEPEAIAKYGEENVKVYSSKFVNLIHSMADP 583183 Query: 672 ENNTCYAKIICNKFDHDRVIGFHILGPNAGEVTQGFAAAMKCGLTKQLLDDTIGIHPTCG 731 E A + D + V+G H+ G A E+ QGF A+K TK D+ + IHPT Sbjct: 583184 ERKGKTAMKLVTVGDKETVVGVHVAGEGADEMIQGFGVAVKMNATKADFDNIVAIHPTAA 583363 Query: 732 EVFTTL 737 E T+ Sbjct: 583364 EELVTM 583381 >supercont1.37 of Phytophthora infestans Length = 1588622 Score = 132 bits (331), Expect = 9e-30, Method: Composition-based stats. Identities = 130/477 (27%), Positives = 211/477 (44%), Gaps = 9/477 (1%) Frame = -2 Query: 267 DYDXXXXXXXXXXXXCAKEAAILGKKVMVLDFVVPSPQGTSWGLGGTCVNVGCIPKK-LM 325 DYD A +AA LG K ++ + LGGTC+NVGCIP K L+ Sbjct: 56224 DYDVVVIGGGPGGYVAAIKAAQLGMKTACIE--------SRGKLGGTCLNVGCIPSKALL 56069 Query: 326 HQAALLGQALCDSRKFGWEYNQQVRHNWETMTKAIQNHISSLNWGYRLSLREKAVAYVNS 385 H LL A D + +G + +V+ N+ M K+ + + +L G ++ V Y+ Sbjct: 56068 HSTHLLHTAQHDFKSYGID-APEVKANFPQMMKSKEKAVKTLTGGIESLFKKNKVTYIKG 55892 Query: 386 YGEFVEHHKIKAT--NKKGQETYYTAAQFVIATGERPRYLG---IQGDKEYCITSDDLFS 440 +G+ +I + KG ET A +IATG L + I S Sbjct: 55891 HGKISAQGEISVALNDNKGNETV-KAKNIIIATGSEVTPLPPVPVDNAAGKIIDSTGALE 55715 Query: 441 LPYCPGKTLVVGASYVALECAGFLAGFGLDVTVM-VRSILLRGFDQEMAEKVGSYMEQHG 499 L P +VVGA + LE G VTV+ G D+E ++ +++ G Sbjct: 55714 LKRVPEHLVVVGAGVIGLELGSVYKRLGAKVTVVEFLDAACPGSDKEAVKEFTKLLKKQG 55535 Query: 500 VKFLRKFIPVMVQQLEKGSPGKLKVLAKSTEGTETIEGVYNTVLLAIGRDSCTRKIGLEK 559 + F +F + G KL +IE +TVL+A GR + T +GLE+ Sbjct: 55534 LDF--QFNTKVTASEVNGDVVKLTTEPSKGGDASSIE--CDTVLVATGRRAFTSGLGLEQ 55367 Query: 560 IGVKINEKSGKIPVNDVEQTNVPYVYAVGDILEDKPELTPVAIQSGKLLAQRLFGASLEK 619 +G++ +K G+I V+D +T VP ++A+GD+++ L A + G + + G Sbjct: 55366 MGIQ-TDKLGRIEVDDAFRTQVPGIFAIGDVIKGA-MLAHKAEEEGIACVENIAGKH-GH 55196 Query: 620 CDYINVPTTVFTPLEYGCCGLSEEKAIEVYKKENLEIYHTLFWPLEWTVAGRE--NNTCY 677 +Y +P ++T E+ G +EE+ K E +E Y+ +P+ R Sbjct: 55195 VNYGAIPGVIYTFPEFASVGKTEEE----LKAEGIE-YNVGKFPMMANSRARTIAEADGL 55031 Query: 678 AKIICNKFDHDRVIGFHILGPNAGEVTQGFAAAMKCGLTKQLLDDTIGIHPTCGEVF 734 K++ +K D+++G HI+ NAGE+ ++ G + L T HPT E F Sbjct: 55030 VKVLADK-KTDKLLGVHIIAGNAGEMIAEGVIGIEYGAASEDLARTCHAHPTLSEAF 54863 Score = 77.4 bits (189), Expect = 3e-13, Method: Composition-based stats. Identities = 43/134 (32%), Positives = 68/134 (50%) Frame = +2 Query: 132 RSGHVRGARVLSPPGRRARLSSPGPXXXXXXXXXXXXHLVGLIERSRVVIFSKSYCPHST 191 R R +LS P P ++ I S VV++SKSYC + T Sbjct: 1272797 RRTQFRDQHLLSSPFSSKTTRRSKPLLLHLKMVSAKENVQTQIAASPVVVYSKSYCRYCT 1272976 Query: 192 RVKELFSSLGVECNVLELDQVDDGARVQEVLSEITNQKTVPNIFVNKVHVGGCDQTFQAY 251 + K L + LG + V+ELDQ++ G+ Q+ L ++T Q TVPN+FV +GG + + Sbjct: 1272977 KTKTLLTELGAKYEVVELDQIEGGSEQQDALEDLTGQGTVPNVFVAGKSIGGNSDVHKLH 1273156 Query: 252 QSGLLQKLLQEDLA 265 ++G L+ LL++ A Sbjct: 1273157 KTGNLEPLLKDSGA 1273198 >supercont1.28 of Phytophthora infestans Length = 2122445 Score = 125 bits (315), Expect = 7e-28, Method: Composition-based stats. Identities = 78/209 (37%), Positives = 116/209 (55%), Gaps = 10/209 (4%) Frame = +3 Query: 539 YNTVLLAIGRDSCTRKIGLEKIGVKINEKSGKIPVNDVEQTNVPYVYAVGDILEDKPELT 598 Y+ V+ A GR T + L+K G+ +E G IPVN++++T+ V AVGD+ P LT Sbjct: 1898991 YDVVIYAAGRVPLTSNLQLDKAGITTDEH-GFIPVNELQETSNSKVLAVGDVC-GTPALT 1899164 Query: 599 PVAIQSGKLLAQRLFGASLE-KCDYINVPTTVFTPLEYGCCGLSEEKAIEVYKKENLEIY 657 PVAI +G+ L+ RLFG + K Y N+PT VF+ G GL+EE+A Y + +++Y Sbjct: 1899165 PVAIAAGRRLSDRLFGGMNDAKVSYENIPTVVFSHPPIGTIGLTEEQARRKYGDDAIKVY 1899344 Query: 658 HTLFWPL---------EWTVAGRENNTCYAKIICNKFDHDRVIGFHILGPNAGEVTQGFA 708 + F + E T ++ K++C ++V+G H++G A E+ QGF Sbjct: 1899345 TSRFVNMYYGLINEVDESTGEPKDKPKTAMKLVCAG-KEEKVVGLHMIGMAADEILQGFG 1899521 Query: 709 AAMKCGLTKQLLDDTIGIHPTCGEVFTTL 737 A+K G TK D+ I IHPT GE TL Sbjct: 1899522 VAVKMGATKADFDNCIAIHPTAGEELVTL 1899608 Score = 51.6 bits (122), Expect = 2e-05, Method: Composition-based stats. Identities = 27/57 (47%), Positives = 32/57 (56%), Gaps = 1/57 (1%) Frame = +1 Query: 429 KEYCITSDDLFSLPYCPGKTLVVGASYVALECAGFLAGFGLDVTVMVRSI-LLRGFD 484 KE CI SD F L P K VVGA Y+A+E AG L G D ++ R +LR FD Sbjct: 1898617 KELCIDSDGFFELETLPKKVAVVGAGYIAVELAGVLNALGSDTSLFCRKEGVLRAFD 1898787 Score = 32.3 bits (72), Expect(2) = 0.001, Method: Composition-based stats. Identities = 13/37 (35%), Positives = 23/37 (62%) Frame = -2 Query: 225 ITNQKTVPNIFVNKVHVGGCDQTFQAYQSGLLQKLLQ 261 + ++TVPN+F+ K +GG +QSG L ++L+ Sbjct: 1660132 VAGRRTVPNVFIKKESIGGGTDVQALFQSGKLTEMLR 1660022 Score = 31.6 bits (70), Expect(2) = 0.001, Method: Composition-based stats. Identities = 22/79 (27%), Positives = 34/79 (43%), Gaps = 28/79 (35%) Frame = -1 Query: 179 VVIFSKSYCPHSTRVKEL-------------------------FSSLGVECNVLELDQVD 213 V +FSKSYCP+ V++L GV+ +V+ELD + Sbjct: 1660424 VTVFSKSYCPYCNLVRQLL*NYYRISLKRCHPSPGLFR*AKGVLDEAGVKYHVVELDLKN 1660245 Query: 214 D---GARVQEVLSEITNQK 229 D GA +Q L+ T ++ Sbjct: 1660244 DVPTGAEIQSALATATGRQ 1660188 Score = 40.8 bits (94), Expect = 0.024, Method: Composition-based stats. Identities = 21/36 (58%), Positives = 25/36 (69%), Gaps = 1/36 (2%) Frame = +2 Query: 310 LGGTCVNVGCIPKKLMHQAALLGQAL-CDSRKFGWE 344 LGGTCVNVGC+PKKLM AA + L D +G+E Sbjct: 1898081 LGGTCVNVGCVPKKLMFIAADMSHKLRHDLLHYGFE 1898188 >supercont1.92 of Phytophthora infestans Length = 551618 Score = 75.5 bits (184), Expect(2) = 8e-27, Method: Composition-based stats. Identities = 68/255 (26%), Positives = 121/255 (47%), Gaps = 2/255 (0%) Frame = -1 Query: 482 GFDQEMAEKVGSYMEQHGVKFLRKFIPVMVQQLEKGSPGKLKVLAKSTEGTETIEGVYNT 541 G D+E ++ +++ G+ F +F + G KL +IE +T Sbjct: 230744 GSDKEAVKEFTKLLKKQGLDF--QFNTKVTASEVNGDVVKLTTEPSKGGDASSIE--CDT 230577 Query: 542 VLLAIGRDSCTRKIGLEKIGVKINEKSGKIPVNDVEQTNVPYVYAVGDILEDKPELTPVA 601 VL+A GR + T +GLE++G++ +K G+I V+D +T VP ++A+GD+++ L A Sbjct: 230576 VLVATGRRAFTSGLGLEQMGIQ-TDKLGRIEVDDAFRTQVPGIFAIGDVIKGA-MLAHKA 230403 Query: 602 IQSGKLLAQRLFGASLEKCDYINVPTTVFTPLEYGCCGLSEEKAIEVYKKENLEIYHTLF 661 + G + + G +Y +P ++T E+ G +EE+ K E +E Y+ Sbjct: 230402 EEEGIACVENIAGKH-GHVNYGAIPGVIYTFPEFASVGKTEEE----LKAEGIE-YNVGK 230241 Query: 662 WPLEWTVAGRE--NNTCYAKIICNKFDHDRVIGFHILGPNAGEVTQGFAAAMKCGLTKQL 719 +P+ R K++ +K D+++G HI+ NAGE+ ++ G + Sbjct: 230240 FPMMANSRARTIAEADGLVKVLADK-KTDKLLGVHIIAGNAGEMIAEGVIGIEYGAASED 230064 Query: 720 LDDTIGIHPTCGEVF 734 L T HPT E F Sbjct: 230063 LARTCHAHPTLSEAF 230019 Score = 67.8 bits (164), Expect(2) = 8e-27, Method: Composition-based stats. Identities = 59/199 (29%), Positives = 86/199 (43%), Gaps = 6/199 (3%) Frame = -3 Query: 267 DYDXXXXXXXXXXXXCAKEAAILGKKVMVLDFVVPSPQGTSWGLGGTCVNVGCIPKK-LM 325 DYD A +AA LG K ++ + LGGTC+NVGCIP K L+ Sbjct: 231381 DYDVVVIGGGPGGYVAAIKAAQLGMKTACIE--------SRGKLGGTCLNVGCIPSKALL 231226 Query: 326 HQAALLGQALCDSRKFGWEYNQQVRHNWETMTKAIQNHISSLNWGYRLSLREKAVAYVNS 385 H LL A D + +G + +V+ N+ M K+ + + +L G L ++ V Y+ Sbjct: 231225 HSTHLLHTAQHDFKSYGID-APEVKANFPQMMKSKEKAVKTLTGGIELLFKKNKVTYIKG 231049 Query: 386 YGEFVEHHKIKA--TNKKGQETYYTAAQFVIATGERPRYL---GIQGDKEYCITSDDLFS 440 +G+ +I + KG ET A +IATG L + I S Sbjct: 231048 HGKISAQGEISVALNDNKGNET-VKAKNIIIATGSEVTPLPPVPVDNAAGKIIDSTGALE 230872 Query: 441 LPYCPGKTLVVGASYVALE 459 L P +VVGA + LE Sbjct: 230871 LKRVPEHLVVVGAGVIGLE 230815 >supercont1.3 of Phytophthora infestans Length = 5458067 Score = 87.8 bits (216), Expect = 2e-16, Method: Composition-based stats. Identities = 41/95 (43%), Positives = 60/95 (63%) Frame = -3 Query: 174 IERSRVVIFSKSYCPHSTRVKELFSSLGVECNVLELDQVDDGARVQEVLSEITNQKTVPN 233 I + +V++FSK++CP+ RVK L + V+ELD DDGA +Q +L +IT Q+TVPN Sbjct: 3454152 ISKEKVLVFSKTHCPYCARVKGTLDVLDAKYEVVELDTRDDGADIQSLLLDITGQRTVPN 3453973 Query: 234 IFVNKVHVGGCDQTFQAYQSGLLQKLLQEDLAYDY 268 +F+N H+GGCD + L +L E+ A DY Sbjct: 3453972 VFINGKHIGGCDDVLTLHTKSELVPML-EN*AEDY 3453871 >supercont1.6 of Phytophthora infestans Length = 4722445 Score = 82.0 bits (201), Expect = 1e-14, Method: Composition-based stats. Identities = 39/92 (42%), Positives = 61/92 (66%) Frame = -2 Query: 174 IERSRVVIFSKSYCPHSTRVKELFSSLGVECNVLELDQVDDGARVQEVLSEITNQKTVPN 233 I + VV++SKSYCP+ T+ K L + LG + +V+ELDQV G+ Q+ L +IT Q TVPN Sbjct: 3497736 ISSTPVVVYSKSYCPYCTKTKTLLTQLGAKYDVVELDQVAGGSEQQDALEQITGQSTVPN 3497557 Query: 234 IFVNKVHVGGCDQTFQAYQSGLLQKLLQEDLA 265 +FV +GG + +++G L+ LL+++ A Sbjct: 3497556 VFVGGKSIGGNSDVQKLHKAGNLEPLLEQNSA 3497461 >supercont1.4 of Phytophthora infestans Length = 5137561 Score = 77.8 bits (190), Expect = 2e-13, Method: Composition-based stats. Identities = 40/94 (42%), Positives = 57/94 (60%) Frame = +2 Query: 174 IERSRVVIFSKSYCPHSTRVKELFSSLGVECNVLELDQVDDGARVQEVLSEITNQKTVPN 233 I ++ +V+FSKSYCP+ + KE +SLG + V ELD +DGA +Q L +T Q TVPN Sbjct: 2898869 INQNPLVLFSKSYCPYCKKTKETLASLGAKPVVFELDTREDGAAIQAFLFRLTRQSTVPN 2899048 Query: 234 IFVNKVHVGGCDQTFQAYQSGLLQKLLQEDLAYD 267 +F+ VGG D + +SG L L++ A D Sbjct: 2899049 LFIKGKSVGGNDNVQELQRSGELVDRLKKARAID 2899150 Score = 37.0 bits (84), Expect = 0.38, Method: Composition-based stats. Identities = 18/84 (21%), Positives = 41/84 (48%) Frame = +2 Query: 179 VVIFSKSYCPHSTRVKELFSSLGVECNVLELDQVDDGARVQEVLSEITNQKTVPNIFVNK 238 VVI S+ CP ++++ +E+ + E + +T +K++P +F+ Sbjct: 2898581 VVIISEKDCPEKKELEKMLHKFRTTVRTMEIGFANHVPYELEAVEALTGRKSLPLVFMKG 2898760 Query: 239 VHVGGCDQTFQAYQSGLLQKLLQE 262 ++GG + + Q G L+ +L++ Sbjct: 2898761 KYIGGLREVQKLQQVGTLRAMLEK 2898832 >supercont1.91 of Phytophthora infestans Length = 525183 Score = 49.3 bits (116), Expect = 9e-05, Method: Composition-based stats. Identities = 55/215 (25%), Positives = 85/215 (39%), Gaps = 18/215 (8%) Frame = +2 Query: 268 YDXXXXXXXXXXXXCAKEAAILGKKVMVLDFVVPSPQGTSWGLGGTCVNVGCIPKKLMHQ 327 YD CA E+A GK+V ++D LGG CV+ G IP K + Sbjct: 92588 YDLVVIGSGPSATQCALESAKQGKRVAIVD--------KKTRLGGVCVHTGTIPSKTFRE 92743 Query: 328 AALLGQALCDSRKFGWEYNQQVRHNWETMTKAIQNHISSLNWGYRLSLREKAVAYVNSYG 387 A L +G Y+ + E + +Q +SS R L+ V V + Sbjct: 92744 AVLHLSGYRHHGFYGKSYSMKTV-TIEDILYRVQRVVSSEEDVVRAQLKAARVDVVPGFA 92920 Query: 388 EFVEHHKI---KATNKKGQETYYT------------AAQFVIATGERPRYLG-IQGDKEY 431 F H+I + + K + + T A +F+IA G RP + I D + Sbjct: 92921 RFENEHEISIVRDEDDKKKNSSVTGRSNVDSLSRIKADKFLIACGTRPAHNPLIPIDGKV 93100 Query: 432 CITSDDLFS--LPYCPGKTLVVGASYVALECAGFL 464 I SD + S + P +V+GA + +E A + Sbjct: 93101 VIDSDQILSRDMHQLPRSLIVLGAGVIGMEYASMV 93205 >supercont1.130 of Phytophthora infestans Length = 314235 Score = 43.9 bits (102), Expect = 0.003, Method: Composition-based stats. Identities = 40/157 (25%), Positives = 72/157 (45%), Gaps = 2/157 (1%) Frame = -1 Query: 580 NVPYVYAVGDILEDKPELTPVAIQSGKLLAQRLFGASLEKCDYINVPTTVFTPLEYGCCG 639 +VP ++A+GD+++ L A + G + + G +Y +P ++T E+ G Sbjct: 50961 SVPGIFAIGDVIKGA-MLAHKAEEEGIACVENIAGKH-GHVNYGAIPGVIYTFPEFASVG 50788 Query: 640 LSEEKAIEVYKKENLEIYHTLFWPLEWTVAGRE--NNTCYAKIICNKFDHDRVIGFHILG 697 +EE+ K E +E Y+ +P+ R K++ +K D+++G HI+ Sbjct: 50787 KTEEE----LKAEGIE-YNVGKFPMMANSRARTIAEADGLVKVLADK-KTDKLLGVHIIA 50626 Query: 698 PNAGEVTQGFAAAMKCGLTKQLLDDTIGIHPTCGEVF 734 NAGE+ ++ G + L T HPT E F Sbjct: 50625 GNAGEMIAEGVIGIEYGAASEDLARTCHAHPTLSEAF 50515 >supercont1.14 of Phytophthora infestans Length = 3113719 Score = 38.1 bits (87), Expect = 0.17, Method: Composition-based stats. Identities = 28/92 (30%), Positives = 46/92 (50%), Gaps = 5/92 (5%) Frame = +2 Query: 173 LIERSRVVIFSKS-----YCPHSTRVKELFSSLGVECNVLELDQVDDGARVQEVLSEITN 227 LI R+RV+IF K C S ++ ++ + G + + ++ DD R + L E +N Sbjct: 2482103 LINRARVMIFIKGTPQQPQCGFSRKLVDILDAEGFKYDYFDI-LTDDSVR--QGLKEHSN 2482273 Query: 228 QKTVPNIFVNKVHVGGCDQTFQAYQSGLLQKL 259 T P ++VN +GG D Q + G L +L Sbjct: 2482274 WPTFPQLYVNGELIGGLDIVQQLQEDGELAEL 2482369 >supercont1.2 of Phytophthora infestans Length = 5928454 Score = 32.7 bits (73), Expect = 7.2, Method: Composition-based stats. Identities = 15/33 (45%), Positives = 21/33 (63%) Frame = +3 Query: 230 TVPNIFVNKVHVGGCDQTFQAYQSGLLQKLLQE 262 T+P ++VN VGGCD +SG L +LL+E Sbjct: 4143222 TIPQLYVNGEFVGGCDIITDMNKSGELSELLEE 4143320 Database: genome.fa Posted date: Feb 28, 2008 11:00 AM Number of letters in database: 228,543,505 Number of sequences in database: 4921 Lambda K H 0.319 0.138 0.418 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 4921 Number of Hits to DB: 488,559,363 Number of extensions: 7767922 Number of successful extensions: 36283 Number of sequences better than 10.0: 20 Number of HSP's gapped: 36223 Number of HSP's successfully gapped: 56 Length of database: 76,181,168 Neighboring words threshold: 13 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 53 (25.0 bits)