TBLASTN 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= SPP00000004_1.0 # Prot # Glutathione peroxidase 1 (GPx1) # Hs (203 letters) Database: genome.fa 4921 sequences; 228,543,505 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value supercont1.3 of Phytophthora infestans 161 2e-39 supercont1.67 of Phytophthora infestans 110 6e-24 supercont1.56 of Phytophthora infestans 105 2e-22 supercont1.8 of Phytophthora infestans 75 2e-13 supercont1.36 of Phytophthora infestans 46 1e-04 supercont1.21 of Phytophthora infestans 44 4e-04 >supercont1.3 of Phytophthora infestans Length = 5458067 Score = 161 bits (408), Expect = 2e-39, Method: Composition-based stats. Identities = 90/213 (42%), Positives = 115/213 (53%), Gaps = 31/213 (14%) Frame = +3 Query: 14 QSVYAFSARPLAGGEPVSLGSLRGKVLLIENVASLUGTTVRDYTQMNELQRRLGPRGLVV 73 ++ + FS R L G + + L GK +LI NVAS +T + Y Q+NEL +R P L++ Sbjct: 810402 KTAHNFSFRSLTGSKFIRLADYAGKPILIVNVASHCNSTTKAYVQLNELSKRF-PE-LII 810575 Query: 74 LGFPCNQFGHQENAKNEEILNSLKYVRPGGGFEPNFMLFEKCEVNGAGAHPLFAFLREAL 133 +G PCNQFGHQEN EEI SL++VRPG GFE F L EK EVNGA AH LF FLR L Sbjct: 810576 IGCPCNQFGHQENLNGEEIYQSLRHVRPGKGFETAFQLTEKVEVNGANAHALFNFLRITL 810755 Query: 134 PAPSDDA--------TALMTDPKLITWSPVCRNDVAWNFEK------------------- 166 P P D + + + P + W PV R DV+WNFEK Sbjct: 810756 PYPCDRTLLDEMSTPSGVFSHPMRLIWMPVTRADVSWNFEKVPHCSKLLLLRHIELLTCC 810935 Query: 167 ----FLVGPDGVPLRRYSRRFQTIDIEPDIEAL 195 FL+ PDG P +RYS + + DI+ L Sbjct: 810936 YCVQFLISPDGTPYKRYSPKLDFTGMIEDIKFL 811034 >supercont1.67 of Phytophthora infestans Length = 703539 Score = 110 bits (274), Expect = 6e-24, Method: Composition-based stats. Identities = 62/170 (36%), Positives = 89/170 (52%) Frame = -2 Query: 30 VSLGSLRGKVLLIENVASLUGTTVRDYTQMNELQRRLGPRGLVVLGFPCNQFGHQENAKN 89 VS+ +GKV+L+ NV+S G T +Y ++ +L + GLVVLGFPCNQF QE + Sbjct: 225788 VSMEDYKGKVVLVVNVSSKCGLTPTNYPELQQLHEKYHEEGLVVLGFPCNQFAGQEPGTH 225609 Query: 90 EEILNSLKYVRPGGGFEPNFMLFEKCEVNGAGAHPLFAFLREALPAPSDDATALMTDPKL 149 EEIL +K + F LFEK +VNG+ A P+F +L+ LP Sbjct: 225608 EEILEFVKQ------YNVTFPLFEKHDVNGSNARPVFTYLKAKLPG-------------- 225489 Query: 150 ITWSPVCRNDVAWNFEKFLVGPDGVPLRRYSRRFQTIDIEPDIEALLSQG 199 N + WNF KFLV +G P +R++ + E DI+ LL++ Sbjct: 225488 -----TFGNYIKWNFTKFLVDRNGQPFKRFAPKDLPPSFEEDIKELLAKA 225354 Score = 109 bits (273), Expect = 7e-24, Method: Composition-based stats. Identities = 66/185 (35%), Positives = 94/185 (50%) Frame = -1 Query: 14 QSVYAFSARPLAGGEPVSLGSLRGKVLLIENVASLUGTTVRDYTQMNELQRRLGPRGLVV 73 +S Y +AG E VS+ +GKV+L NV+S G T +Y ++ L + GL V Sbjct: 179142 KSFYELKDFNMAGNE-VSMSKYKGKVVLAVNVSSKCGLTPTNYPELQTLYEKYKDEGLEV 178966 Query: 74 LGFPCNQFGHQENAKNEEILNSLKYVRPGGGFEPNFMLFEKCEVNGAGAHPLFAFLREAL 133 L FPCNQF QE +EEI+ +K + F FEK +VNGA A P+F +L+ L Sbjct: 178965 LAFPCNQFAGQEPGAHEEIMEFVKQ------YNVTFPFFEKHDVNGATARPVFTYLKTKL 178804 Query: 134 PAPSDDATALMTDPKLITWSPVCRNDVAWNFEKFLVGPDGVPLRRYSRRFQTIDIEPDIE 193 P D V WNF KFLV +G P +R++ + + + +E DI+ Sbjct: 178803 PGSFGDF-------------------VKWNFTKFLVDRNGQPYKRFAPKDRPLSLEEDIK 178681 Query: 194 ALLSQ 198 LL+Q Sbjct: 178680 TLLAQ 178666 Score = 107 bits (268), Expect = 3e-23, Method: Composition-based stats. Identities = 65/185 (35%), Positives = 93/185 (50%) Frame = -1 Query: 14 QSVYAFSARPLAGGEPVSLGSLRGKVLLIENVASLUGTTVRDYTQMNELQRRLGPRGLVV 73 +S Y +AG E VS+ +GKV+L NV+S G T +Y ++ L + GL V Sbjct: 230970 KSFYELKDFDMAGNE-VSMSKYKGKVVLAVNVSSKCGLTPTNYPELQTLYEKYKEEGLEV 230794 Query: 74 LGFPCNQFGHQENAKNEEILNSLKYVRPGGGFEPNFMLFEKCEVNGAGAHPLFAFLREAL 133 L FPCNQF QE +EEI+ +K + F FEK +VNGA A P+F +L+ L Sbjct: 230793 LAFPCNQFAGQEPGTHEEIMEFVKQ------YNVTFPFFEKHDVNGATARPVFTYLKTKL 230632 Query: 134 PAPSDDATALMTDPKLITWSPVCRNDVAWNFEKFLVGPDGVPLRRYSRRFQTIDIEPDIE 193 P D V WNF KFLV +G P +R++ + + + E +I+ Sbjct: 230631 PGSFGDF-------------------VKWNFTKFLVDRNGQPYKRFAPKDRPLSFEEEIK 230509 Query: 194 ALLSQ 198 LL+Q Sbjct: 230508 TLLAQ 230494 Score = 67.4 bits (163), Expect = 4e-11, Method: Composition-based stats. Identities = 51/177 (28%), Positives = 73/177 (41%), Gaps = 1/177 (0%) Frame = -2 Query: 25 AGGEPVSLGSLRGKVLLIENVAS-LUGTTVRDYTQMNELQRRLGPRGLVVLGFPCNQFGH 83 A G L LRG V L+ NV+S + + Q+ EL + GL V+ FP QFG Sbjct: 223694 ASGNTFCLSELRGHVALLTNVSSGTCSSNAKQLQQLEELSSKYVDAGLTVVAFPSAQFGD 223515 Query: 84 QENAKNEEILNSLKYVRPGGGFEPNFMLFEKCEVNGAGAHPLFAFLREALPAPSDDATAL 143 E +E+++ + F NF + +VNG A F + LP + A Sbjct: 223514 GEFGNDEDLVEYFHEL-----FGVNFPVLATRDVNGPSARDAMLFCKTRLPGAAKSAANA 223350 Query: 144 MTDPKLITWSPVCRNDVAWNFEKFLVGPDGVPLRRYSRRFQTIDIEPDIEALLSQGP 200 + N+ KFLVG DG +RY + +E DI+ LL P Sbjct: 223349 FIEN---------------NYVKFLVGRDGHLFKRYGACDLPLSMETDIQNLLQATP 223224 >supercont1.56 of Phytophthora infestans Length = 775166 Score = 105 bits (262), Expect = 2e-22, Method: Composition-based stats. Identities = 65/185 (35%), Positives = 92/185 (49%) Frame = -3 Query: 14 QSVYAFSARPLAGGEPVSLGSLRGKVLLIENVASLUGTTVRDYTQMNELQRRLGPRGLVV 73 +S Y +AG E VS+ +GKV+L NV+S G T +Y ++ L + GL V Sbjct: 626100 KSFYELKDFNMAGNE-VSMSKYKGKVVLAVNVSSKCGLTPTNYPELQTLYEKYKDEGLEV 625924 Query: 74 LGFPCNQFGHQENAKNEEILNSLKYVRPGGGFEPNFMLFEKCEVNGAGAHPLFAFLREAL 133 L FPCNQF QE +EEI+ +K + F FEK VNGA A P+F +L+ L Sbjct: 625923 LAFPCNQFAGQEPGTHEEIMEFVKQ------YNVTFPFFEKHYVNGATARPVFTYLKTKL 625762 Query: 134 PAPSDDATALMTDPKLITWSPVCRNDVAWNFEKFLVGPDGVPLRRYSRRFQTIDIEPDIE 193 P D V WNF KFLV + P +R++ + + + +E DI+ Sbjct: 625761 PGSFGDF-------------------VKWNFTKFLVDRNRQPYKRFAPKDRPLSLEEDIK 625639 Query: 194 ALLSQ 198 LL+Q Sbjct: 625638 TLLAQ 625624 >supercont1.8 of Phytophthora infestans Length = 3946259 Score = 75.1 bits (183), Expect = 2e-13, Method: Composition-based stats. Identities = 58/176 (32%), Positives = 87/176 (49%) Frame = +3 Query: 26 GGEPVSLGSLRGKVLLIENVASLUGTTVRDYTQMNELQRRLGPRGLVVLGFPCNQFGHQE 85 GGE G L +V+L+ N+ S G T +Y ++ +L + GLV LGFP N+F E Sbjct: 1504137 GGE---YGGL*RQVVLVVNMTSKCGLTPTNYPELQQLHEKCQREGLVGLGFP*NKFAGPE 1504307 Query: 86 NAKNEEILNSLKYVRPGGGFEPNFMLFEKCEVNGAGAHPLFAFLREALPAPSDDATALMT 145 +EEI L+ V+P + F++ EK +VNG+ A P+F L+ L Sbjct: 1504308 PGTHEEI---LELVKP---YNVMFLMLEKHDVNGSSAPPVFTHLKAKL------------ 1504433 Query: 146 DPKLITWSPVCRNDVAWNFEKFLVGPDGVPLRRYSRRFQTIDIEPDIEALLSQGPS 201 S N + N KFLV +G P +RY+ + + E DI+ LL++ PS Sbjct: 1504434 -------SCTFGNYIK*NNTKFLVDRNGQPYKRYAPKDLPLSFEEDIKELLAKVPS 1504580 >supercont1.36 of Phytophthora infestans Length = 1665391 Score = 45.8 bits (107), Expect = 1e-04, Method: Composition-based stats. Identities = 28/77 (36%), Positives = 37/77 (48%) Frame = +1 Query: 116 EVNGAGAHPLFAFLREALPAPSDDATALMTDPKLITWSPVCRNDVAWNFEKFLVGPDGVP 175 +VNG AHPLF FL++ L IT ND+ WNF KFL+ + P Sbjct: 529216 DVNGENAHPLFNFLKKKLDG-------------FIT------NDIKWNFTKFLI-VNHEP 529335 Query: 176 LRRYSRRFQTIDIEPDI 192 +RY ++IE DI Sbjct: 529336 SKRYGTSTSPLEIESDI 529386 Score = 40.8 bits (94), Expect = 0.005, Method: Composition-based stats. Identities = 18/33 (54%), Positives = 21/33 (63%) Frame = +3 Query: 61 ELQRRLGPRGLVVLGFPCNQFGHQENAKNEEIL 93 EL + G +VLGFPCNQFG QE E+IL Sbjct: 528993 ELYEKYHDEGFMVLGFPCNQFGGQEPGTAEDIL 529091 >supercont1.21 of Phytophthora infestans Length = 2319577 Score = 44.3 bits (103), Expect = 4e-04, Method: Composition-based stats. Identities = 40/139 (28%), Positives = 56/139 (40%) Frame = -2 Query: 35 LRGKVLLIENVASLUGTTVRDYTQMNELQRRLGPRGLVVLGFPCNQFGHQENAKNEEILN 94 R K L+ N AS G + Q+ L + +GL+V+ P N F QE K ++IL Sbjct: 225291 FRFKAALVVNTASKCGHAGQ-LKQLQALHEKYSEQGLIVVAVPSNDFAGQEPGKVDDILK 225115 Query: 95 SLKYVRPGGGFEPNFMLFEKCEVNGAGAHPLFAFLREALPAPSDDATALMTDPKLITWSP 154 +Y G F + E+ V G AHP F + D + +P Sbjct: 225114 --RYADCG----VTFAIAERTPVAGDKAHPFFK---------------KIADKYSTSVAP 224998 Query: 155 VCRNDVAWNFEKFLVGPDG 173 WNF+KFLV G Sbjct: 224997 T------WNFDKFLVDHRG 224959 TBLASTN 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= SPP00000005_1.0 # Prot # Glutathione peroxidase 2 (GPx2) # Hs (190 letters) Database: genome.fa 4921 sequences; 228,543,505 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value supercont1.3 of Phytophthora infestans 165 1e-40 supercont1.67 of Phytophthora infestans 119 1e-26 supercont1.56 of Phytophthora infestans 102 1e-21 supercont1.8 of Phytophthora infestans 66 7e-11 supercont1.36 of Phytophthora infestans 46 2e-10 supercont1.21 of Phytophthora infestans 47 4e-05 supercont1.9 of Phytophthora infestans 33 0.93 >supercont1.3 of Phytophthora infestans Length = 5458067 Score = 165 bits (417), Expect = 1e-40, Method: Composition-based stats. Identities = 90/217 (41%), Positives = 121/217 (55%), Gaps = 32/217 (14%) Frame = +3 Query: 6 KSFYDLSAISLDGEK-VDFNTFRGRAVLIENVASLUGTTTRDFTQLNELQCRFPRRLVVL 64 K+ ++ S SL G K + + G+ +LI NVAS +TT+ + QLNEL RFP L+++ Sbjct: 810402 KTAHNFSFRSLTGSKFIRLADYAGKPILIVNVASHCNSTTKAYVQLNELSKRFPE-LIII 810578 Query: 65 GFPCNQFGHQENCQNEEILNSLKYVRPGGGYQPTFTLVQKCEVNGQNEHPVFAYLKDKLP 124 G PCNQFGHQEN EEI SL++VRPG G++ F L +K EVNG N H +F +L+ LP Sbjct: 810579 GCPCNQFGHQENLNGEEIYQSLRHVRPGKGFETAFQLTEKVEVNGANAHALFNFLRITLP 810758 Query: 125 YPYD--------DPFSLMTDPKLIIWSPVRRSDVAWNFEK-------------------- 156 YP D P + + P +IW PV R+DV+WNFEK Sbjct: 810759 YPCDRTLLDEMSTPSGVFSHPMRLIWMPVTRADVSWNFEKVPHCSKLLLLRHIELLTCCY 810938 Query: 157 ---FLIGPEGEPFRRYSRTFPTINIEPDIKRLLKVAI 190 FLI P+G P++RYS + DIK L KV + Sbjct: 810939 CVQFLISPDGTPYKRYSPKLDFTGMIEDIKFLCKVDV 811049 >supercont1.67 of Phytophthora infestans Length = 703539 Score = 119 bits (297), Expect = 1e-26, Method: Composition-based stats. Identities = 71/186 (38%), Positives = 99/186 (53%), Gaps = 1/186 (0%) Frame = -2 Query: 5 AKSFYDLSAISLDGEKVDFNTFRGRAVLIENVASLUGTTTRDFTQLNELQCRFPRR-LVV 63 AKSFY+L +D ++V ++G+ VL+ NV+S G T ++ +L +L ++ LVV Sbjct: 225836 AKSFYELKDFDMDKKEVSMEDYKGKVVLVVNVSSKCGLTPTNYPELQQLHEKYHEEGLVV 225657 Query: 64 LGFPCNQFGHQENCQNEEILNSLKYVRPGGGYQPTFTLVQKCEVNGQNEHPVFAYLKDKL 123 LGFPCNQF QE +EEIL +K Y TF L +K +VNG N PVF YLK KL Sbjct: 225656 LGFPCNQFAGQEPGTHEEILEFVKQ------YNVTFPLFEKHDVNGSNARPVFTYLKAKL 225495 Query: 124 PYPYDDPFSLMTDPKLIIWSPVRRSDVAWNFEKFLIGPEGEPFRRYSRTFPTINIEPDIK 183 P + + + WNF KFL+ G+PF+R++ + E DIK Sbjct: 225494 PGTFGNY-------------------IKWNFTKFLVDRNGQPFKRFAPKDLPPSFEEDIK 225372 Query: 184 RLLKVA 189 LL A Sbjct: 225371 ELLAKA 225354 Score = 107 bits (268), Expect = 3e-23, Method: Composition-based stats. Identities = 65/182 (35%), Positives = 94/182 (51%), Gaps = 1/182 (0%) Frame = -1 Query: 6 KSFYDLSAISLDGEKVDFNTFRGRAVLIENVASLUGTTTRDFTQLNELQCRFPRR-LVVL 64 KSFY+L ++ G +V + ++G+ VL NV+S G T ++ +L L ++ L VL Sbjct: 179142 KSFYELKDFNMAGNEVSMSKYKGKVVLAVNVSSKCGLTPTNYPELQTLYEKYKDEGLEVL 178963 Query: 65 GFPCNQFGHQENCQNEEILNSLKYVRPGGGYQPTFTLVQKCEVNGQNEHPVFAYLKDKLP 124 FPCNQF QE +EEI+ +K Y TF +K +VNG PVF YLK KLP Sbjct: 178962 AFPCNQFAGQEPGAHEEIMEFVKQ------YNVTFPFFEKHDVNGATARPVFTYLKTKLP 178801 Query: 125 YPYDDPFSLMTDPKLIIWSPVRRSDVAWNFEKFLIGPEGEPFRRYSRTFPTINIEPDIKR 184 + D V WNF KFL+ G+P++R++ +++E DIK Sbjct: 178800 GSFGD-------------------FVKWNFTKFLVDRNGQPYKRFAPKDRPLSLEEDIKT 178678 Query: 185 LL 186 LL Sbjct: 178677 LL 178672 Score = 105 bits (261), Expect = 2e-22, Method: Composition-based stats. Identities = 64/182 (35%), Positives = 92/182 (50%), Gaps = 1/182 (0%) Frame = -1 Query: 6 KSFYDLSAISLDGEKVDFNTFRGRAVLIENVASLUGTTTRDFTQLNELQCRFPRR-LVVL 64 KSFY+L + G +V + ++G+ VL NV+S G T ++ +L L ++ L VL Sbjct: 230970 KSFYELKDFDMAGNEVSMSKYKGKVVLAVNVSSKCGLTPTNYPELQTLYEKYKEEGLEVL 230791 Query: 65 GFPCNQFGHQENCQNEEILNSLKYVRPGGGYQPTFTLVQKCEVNGQNEHPVFAYLKDKLP 124 FPCNQF QE +EEI+ +K Y TF +K +VNG PVF YLK KLP Sbjct: 230790 AFPCNQFAGQEPGTHEEIMEFVKQ------YNVTFPFFEKHDVNGATARPVFTYLKTKLP 230629 Query: 125 YPYDDPFSLMTDPKLIIWSPVRRSDVAWNFEKFLIGPEGEPFRRYSRTFPTINIEPDIKR 184 + D V WNF KFL+ G+P++R++ ++ E +IK Sbjct: 230628 GSFGD-------------------FVKWNFTKFLVDRNGQPYKRFAPKDRPLSFEEEIKT 230506 Query: 185 LL 186 LL Sbjct: 230505 LL 230500 Score = 55.1 bits (131), Expect = 2e-07, Method: Composition-based stats. Identities = 44/183 (24%), Positives = 75/183 (40%), Gaps = 2/183 (1%) Frame = -2 Query: 7 SFYDLSAISLDGEKVDFNTFRGRAVLIENVAS-LUGTTTRDFTQLNELQCRF-PRRLVVL 64 S Y L G + RG L+ NV+S + + QL EL ++ L V+ Sbjct: 223721 SLYSLRDTDASGNTFCLSELRGHVALLTNVSSGTCSSNAKQLQQLEELSSKYVDAGLTVV 223542 Query: 65 GFPCNQFGHQENCQNEEILNSLKYVRPGGGYQPTFTLVQKCEVNGQNEHPVFAYLKDKLP 124 FP QFG E +E+++ + + F ++ +VNG + + K +LP Sbjct: 223541 AFPSAQFGDGEFGNDEDLVEYFHEL-----FGVNFPVLATRDVNGPSARDAMLFCKTRLP 223377 Query: 125 YPYDDPFSLMTDPKLIIWSPVRRSDVAWNFEKFLIGPEGEPFRRYSRTFPTINIEPDIKR 184 + + N+ KFL+G +G F+RY +++E DI+ Sbjct: 223376 GAAKSAANAFIEN---------------NYVKFLVGRDGHLFKRYGACDLPLSMETDIQN 223242 Query: 185 LLK 187 LL+ Sbjct: 223241 LLQ 223233 >supercont1.56 of Phytophthora infestans Length = 775166 Score = 102 bits (253), Expect = 1e-21, Method: Composition-based stats. Identities = 64/182 (35%), Positives = 92/182 (50%), Gaps = 1/182 (0%) Frame = -3 Query: 6 KSFYDLSAISLDGEKVDFNTFRGRAVLIENVASLUGTTTRDFTQLNELQCRFPRR-LVVL 64 KSFY+L ++ G +V + ++G+ VL NV+S G T ++ +L L ++ L VL Sbjct: 626100 KSFYELKDFNMAGNEVSMSKYKGKVVLAVNVSSKCGLTPTNYPELQTLYEKYKDEGLEVL 625921 Query: 65 GFPCNQFGHQENCQNEEILNSLKYVRPGGGYQPTFTLVQKCEVNGQNEHPVFAYLKDKLP 124 FPCNQF QE +EEI+ +K Y TF +K VNG PVF YLK KLP Sbjct: 625920 AFPCNQFAGQEPGTHEEIMEFVKQ------YNVTFPFFEKHYVNGATARPVFTYLKTKLP 625759 Query: 125 YPYDDPFSLMTDPKLIIWSPVRRSDVAWNFEKFLIGPEGEPFRRYSRTFPTINIEPDIKR 184 + D V WNF KFL+ +P++R++ +++E DIK Sbjct: 625758 GSFGD-------------------FVKWNFTKFLVDRNRQPYKRFAPKDRPLSLEEDIKT 625636 Query: 185 LL 186 LL Sbjct: 625635 LL 625630 >supercont1.8 of Phytophthora infestans Length = 3946259 Score = 66.2 bits (160), Expect = 7e-11, Method: Composition-based stats. Identities = 55/181 (30%), Positives = 87/181 (48%), Gaps = 1/181 (0%) Frame = +3 Query: 7 SFYDLSAISLDGEKVDFNTFRGRAVLIENVASLUGTTTRDFTQLNELQCRFPRR-LVVLG 65 S Y+L + E ++ + VL+ N+ S G T ++ +L +L + R LV LG Sbjct: 1504101 SLYELKGFYMH-EGGEYGGL*RQVVLVVNMTSKCGLTPTNYPELQQLHEKCQREGLVGLG 1504277 Query: 66 FPCNQFGHQENCQNEEILNSLKYVRPGGGYQPTFTLVQKCEVNGQNEHPVFAYLKDKLPY 125 FP N+F E +EEIL + V+P Y F +++K +VNG + PVF +LK KL Sbjct: 1504278 FP*NKFAGPEPGTHEEIL---ELVKP---YNVMFLMLEKHDVNGSSAPPVFTHLKAKLSC 1504439 Query: 126 PYDDPFSLMTDPKLIIWSPVRRSDVAWNFEKFLIGPEGEPFRRYSRTFPTINIEPDIKRL 185 + + + N KFL+ G+P++RY+ ++ E DIK L Sbjct: 1504440 TFGNY-------------------IK*NNTKFLVDRNGQPYKRYAPKDLPLSFEEDIKEL 1504562 Query: 186 L 186 L Sbjct: 1504563 L 1504565 >supercont1.36 of Phytophthora infestans Length = 1665391 Score = 46.2 bits (108), Expect(2) = 2e-10, Method: Composition-based stats. Identities = 30/81 (37%), Positives = 40/81 (49%) Frame = +1 Query: 106 EVNGQNEHPVFAYLKDKLPYPYDDPFSLMTDPKLIIWSPVRRSDVAWNFEKFLIGPEGEP 165 +VNG+N HP+F +LK KL D F +D+ WNF KFLI EP Sbjct: 529216 DVNGENAHPLFNFLKKKL-----DGFI--------------TNDIKWNFTKFLI-VNHEP 529335 Query: 166 FRRYSRTFPTINIEPDIKRLL 186 +RY + + IE DI + L Sbjct: 529336 SKRYGTSTSPLEIESDIVQAL 529398 Score = 38.1 bits (87), Expect(2) = 2e-10, Method: Composition-based stats. Identities = 23/51 (45%), Positives = 28/51 (54%) Frame = +3 Query: 61 LVVLGFPCNQFGHQENCQNEEILNSLKYVRPGGGYQPTFTLVQKCEVNGQN 111 +VLGFPCNQFG QE E+I LK+ + Y TF L K G+N Sbjct: 529023 FMVLGFPCNQFGGQEPGTAEDI---LKFAQE--KYHVTFPLFNKVGSYGEN 529160 >supercont1.21 of Phytophthora infestans Length = 2319577 Score = 47.4 bits (111), Expect = 4e-05, Method: Composition-based stats. Identities = 40/140 (28%), Positives = 60/140 (42%), Gaps = 1/140 (0%) Frame = -2 Query: 26 FRGRAVLIENVASLUGTTTRDFTQLNELQCRFPRR-LVVLGFPCNQFGHQENCQNEEILN 84 FR +A L+ N AS G + QL L ++ + L+V+ P N F QE + ++IL Sbjct: 225291 FRFKAALVVNTASKCGHAGQ-LKQLQALHEKYSEQGLIVVAVPSNDFAGQEPGKVDDILK 225115 Query: 85 SLKYVRPGGGYQPTFTLVQKCEVNGQNEHPVFAYLKDKLPYPYDDPFSLMTDPKLIIWSP 144 +Y G TF + ++ V G HP F + DK +S P Sbjct: 225114 --RYADCG----VTFAIAERTPVAGDKAHPFFKKIADK--------YSTSVAP------- 224998 Query: 145 VRRSDVAWNFEKFLIGPEGE 164 WNF+KFL+ G+ Sbjct: 224997 ------TWNFDKFLVDHRGD 224956 >supercont1.9 of Phytophthora infestans Length = 4027111 Score = 32.7 bits (73), Expect = 0.93, Method: Composition-based stats. Identities = 16/37 (43%), Positives = 19/37 (51%) Frame = -1 Query: 57 FPRRLVVLGFPCNQFGHQENCQNEEILNSLKYVRPGG 93 P R VL FPC Q+NC+ EI KY+ P G Sbjct: 2604943 LPWRACVLSFPC*IPAIQKNCKQSEICQRNKYIVPLG 2604833 TBLASTN 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= SPP00000006_1.0 # Prot # Glutathione peroxidase 3 (GPx3) # Hs (226 letters) Database: genome.fa 4921 sequences; 228,543,505 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value supercont1.3 of Phytophthora infestans 113 6e-25 supercont1.67 of Phytophthora infestans 101 3e-21 supercont1.56 of Phytophthora infestans 84 4e-16 supercont1.21 of Phytophthora infestans 57 5e-08 supercont1.8 of Phytophthora infestans 56 2e-07 supercont1.36 of Phytophthora infestans 41 0.005 supercont1.5 of Phytophthora infestans 32 2.7 supercont1.45 of Phytophthora infestans 31 4.2 >supercont1.3 of Phytophthora infestans Length = 5458067 Score = 113 bits (283), Expect = 6e-25, Method: Composition-based stats. Identities = 69/209 (33%), Positives = 97/209 (46%), Gaps = 36/209 (17%) Frame = +3 Query: 39 TIYEYGALTIDGEEYIPFKQYAGKYVLFVNVASY-UGLTGQYIELNALQEELAPFGLVIL 97 T + + ++ G ++I YAGK +L VNVAS+ T Y++LN L + L+I+ Sbjct: 810405 TAHNFSFRSLTGSKFIRLADYAGKPILIVNVASHCNSTTKAYVQLNELSKRFPE--LIII 810578 Query: 98 GFPCNQFGKQEPGENSEILPTLKYVRPGGGFVPNFQLFEKGDVNGEKEQKFYTFLKNSCP 157 G PCNQFG QE EI +L++VRPG GF FQL EK +VNG + FL+ + P Sbjct: 810579 GCPCNQFGHQENLNGEEIYQSLRHVRPGKGFETAFQLTEKVEVNGANAHALFNFLRITLP 810758 Query: 158 ------------PTSELLGTSDRLFWEPMKVHDIRWNFEK-------------------- 185 S + RL W P+ D+ WNFEK Sbjct: 810759 YPCDRTLLDEMSTPSGVFSHPMRLIWMPVTRADVSWNFEKVPHCSKLLLLRHIELLTCCY 810938 Query: 186 ---FLVGPDGIPIMRWHHRTTVSNVKMDI 211 FL+ PDG P R+ + + + DI Sbjct: 810939 CVQFLISPDGTPYKRYSPKLDFTGMIEDI 811025 >supercont1.67 of Phytophthora infestans Length = 703539 Score = 101 bits (252), Expect = 3e-21, Method: Composition-based stats. Identities = 68/174 (39%), Positives = 88/174 (50%), Gaps = 1/174 (0%) Frame = -2 Query: 39 TIYEYGALTIDGEEYIPFKQYAGKYVLFVNVASYUGLT-GQYIELNALQEELAPFGLVIL 97 + YE +D +E + + Y GK VL VNV+S GLT Y EL L E+ GLV+L Sbjct: 225830 SFYELKDFDMDKKE-VSMEDYKGKVVLVVNVSSKCGLTPTNYPELQQLHEKYHEEGLVVL 225654 Query: 98 GFPCNQFGKQEPGENSEILPTLKYVRPGGGFVPNFQLFEKGDVNGEKEQKFYTFLKNSCP 157 GFPCNQF QEPG + EIL +K + F LFEK DVNG + +T+LK P Sbjct: 225653 GFPCNQFAGQEPGTHEEILEFVKQ------YNVTFPLFEKHDVNGSNARPVFTYLKAKLP 225492 Query: 158 PTSELLGTSDRLFWEPMKVHDIRWNFEKFLVGPDGIPIMRWHHRTTVSNVKMDI 211 T G I+WNF KFLV +G P R+ + + + DI Sbjct: 225491 GT---FGNY------------IKWNFTKFLVDRNGQPFKRFAPKDLPPSFEEDI 225375 Score = 91.7 bits (226), Expect = 3e-18, Method: Composition-based stats. Identities = 62/181 (34%), Positives = 89/181 (49%), Gaps = 1/181 (0%) Frame = -1 Query: 39 TIYEYGALTIDGEEYIPFKQYAGKYVLFVNVASYUGLT-GQYIELNALQEELAPFGLVIL 97 + YE + G E + +Y GK VL VNV+S GLT Y EL L E+ GL +L Sbjct: 179139 SFYELKDFNMAGNE-VSMSKYKGKVVLAVNVSSKCGLTPTNYPELQTLYEKYKDEGLEVL 178963 Query: 98 GFPCNQFGKQEPGENSEILPTLKYVRPGGGFVPNFQLFEKGDVNGEKEQKFYTFLKNSCP 157 FPCNQF QEPG + EI+ +K + F FEK DVNG + +T+LK P Sbjct: 178962 AFPCNQFAGQEPGAHEEIMEFVKQ------YNVTFPFFEKHDVNGATARPVFTYLKTKLP 178801 Query: 158 PTSELLGTSDRLFWEPMKVHDIRWNFEKFLVGPDGIPIMRWHHRTTVSNVKMDILSYMRR 217 G+ ++WNF KFLV +G P R+ + +++ DI + + + Sbjct: 178800 ------GSFGDF---------VKWNFTKFLVDRNGQPYKRFAPKDRPLSLEEDIKTLLAQ 178666 Query: 218 Q 218 + Sbjct: 178665 E 178663 Score = 89.0 bits (219), Expect = 2e-17, Method: Composition-based stats. Identities = 62/182 (34%), Positives = 89/182 (48%), Gaps = 1/182 (0%) Frame = -1 Query: 39 TIYEYGALTIDGEEYIPFKQYAGKYVLFVNVASYUGLT-GQYIELNALQEELAPFGLVIL 97 + YE + G E + +Y GK VL VNV+S GLT Y EL L E+ GL +L Sbjct: 230967 SFYELKDFDMAGNE-VSMSKYKGKVVLAVNVSSKCGLTPTNYPELQTLYEKYKEEGLEVL 230791 Query: 98 GFPCNQFGKQEPGENSEILPTLKYVRPGGGFVPNFQLFEKGDVNGEKEQKFYTFLKNSCP 157 FPCNQF QEPG + EI+ +K + F FEK DVNG + +T+LK P Sbjct: 230790 AFPCNQFAGQEPGTHEEIMEFVKQ------YNVTFPFFEKHDVNGATARPVFTYLKTKLP 230629 Query: 158 PTSELLGTSDRLFWEPMKVHDIRWNFEKFLVGPDGIPIMRWHHRTTVSNVKMDILSYMRR 217 G+ ++WNF KFLV +G P R+ + + + +I + + + Sbjct: 230628 ------GSFGDF---------VKWNFTKFLVDRNGQPYKRFAPKDRPLSFEEEIKTLLAQ 230494 Query: 218 QA 219 +A Sbjct: 230493 KA 230488 Score = 42.4 bits (98), Expect = 0.002, Method: Composition-based stats. Identities = 37/134 (27%), Positives = 55/134 (41%), Gaps = 2/134 (1%) Frame = -2 Query: 61 GKYVLFVNVASYUGLTG--QYIELNALQEELAPFGLVILGFPCNQFGKQEPGENSEILPT 118 G L NV+S + Q +L L + GL ++ FP QFG E G + +++ Sbjct: 223658 GHVALLTNVSSGTCSSNAKQLQQLEELSSKYVDAGLTVVAFPSAQFGDGEFGNDEDLVEY 223479 Query: 119 LKYVRPGGGFVPNFQLFEKGDVNGEKEQKFYTFLKNSCPPTSELLGTSDRLFWEPMKVHD 178 + F NF + DVNG + F K P ++ ++ F E Sbjct: 223478 FHEL-----FGVNFPVLATRDVNGPSARDAMLFCKTRLPGAAK---SAANAFIEN----- 223338 Query: 179 IRWNFEKFLVGPDG 192 N+ KFLVG DG Sbjct: 223337 ---NYVKFLVGRDG 223305 >supercont1.56 of Phytophthora infestans Length = 775166 Score = 84.3 bits (207), Expect = 4e-16, Method: Composition-based stats. Identities = 60/181 (33%), Positives = 87/181 (48%), Gaps = 1/181 (0%) Frame = -3 Query: 39 TIYEYGALTIDGEEYIPFKQYAGKYVLFVNVASYUGLT-GQYIELNALQEELAPFGLVIL 97 + YE + G E + +Y GK VL VNV+S GLT Y EL L E+ GL +L Sbjct: 626097 SFYELKDFNMAGNE-VSMSKYKGKVVLAVNVSSKCGLTPTNYPELQTLYEKYKDEGLEVL 625921 Query: 98 GFPCNQFGKQEPGENSEILPTLKYVRPGGGFVPNFQLFEKGDVNGEKEQKFYTFLKNSCP 157 FPCNQF QEPG + EI+ +K + F FEK VNG + +T+LK P Sbjct: 625920 AFPCNQFAGQEPGTHEEIMEFVKQ------YNVTFPFFEKHYVNGATARPVFTYLKTKLP 625759 Query: 158 PTSELLGTSDRLFWEPMKVHDIRWNFEKFLVGPDGIPIMRWHHRTTVSNVKMDILSYMRR 217 G+ ++WNF KFLV + P R+ + +++ DI + + + Sbjct: 625758 ------GSFGDF---------VKWNFTKFLVDRNRQPYKRFAPKDRPLSLEEDIKTLLAQ 625624 Query: 218 Q 218 + Sbjct: 625623 E 625621 >supercont1.21 of Phytophthora infestans Length = 2319577 Score = 57.4 bits (137), Expect = 5e-08, Method: Composition-based stats. Identities = 43/135 (31%), Positives = 59/135 (43%), Gaps = 4/135 (2%) Frame = -2 Query: 62 KYVLFVNVASYUGLTGQYIELNALQEELAPFGLVILGFPCNQFGKQEPGENSEILPTLKY 121 K L VN AS G GQ +L AL E+ + GL+++ P N F QEPG+ +IL +Y Sbjct: 225282 KAALVVNTASKCGHAGQLKQLQALHEKYSEQGLIVVAVPSNDFAGQEPGKVDDILK--RY 225109 Query: 122 VRPGGGFVPNFQLFEKGDVNGEKEQKFYTFLKN----SCPPTSELLGTSDRLFWEPMKVH 177 G F + E+ V G+K F+ + + S PT Sbjct: 225108 ADCG----VTFAIAERTPVAGDKAHPFFKKIADKYSTSVAPT------------------ 224995 Query: 178 DIRWNFEKFLVGPDG 192 WNF+KFLV G Sbjct: 224994 ---WNFDKFLVDHRG 224959 >supercont1.8 of Phytophthora infestans Length = 3946259 Score = 55.8 bits (133), Expect = 2e-07, Method: Composition-based stats. Identities = 53/145 (36%), Positives = 67/145 (46%), Gaps = 4/145 (2%) Frame = +3 Query: 58 QYAG---KYVLFVNVASYUGLT-GQYIELNALQEELAPFGLVILGFPCNQFGKQEPGENS 113 +Y G + VL VN+ S GLT Y EL L E+ GLV LGFP N+F EPG + Sbjct: 1504143 EYGGL*RQVVLVVNMTSKCGLTPTNYPELQQLHEKCQREGLVGLGFP*NKFAGPEPGTHE 1504322 Query: 114 EILPTLKYVRPGGGFVPNFQLFEKGDVNGEKEQKFYTFLKNSCPPTSELLGTSDRLFWEP 173 EI L+ V+P + F + EK DVNG +T LK T G Sbjct: 1504323 EI---LELVKP---YNVMFLMLEKHDVNGSSAPPVFTHLKAKLSCT---FGNY------- 1504454 Query: 174 MKVHDIRWNFEKFLVGPDGIPIMRW 198 I+ N KFLV +G P R+ Sbjct: 1504455 -----IK*NNTKFLVDRNGQPYKRY 1504514 >supercont1.36 of Phytophthora infestans Length = 1665391 Score = 40.8 bits (94), Expect = 0.005, Method: Composition-based stats. Identities = 18/32 (56%), Positives = 22/32 (68%) Frame = +3 Query: 85 LQEELAPFGLVILGFPCNQFGKQEPGENSEIL 116 L E+ G ++LGFPCNQFG QEPG +IL Sbjct: 528996 LYEKYHDEGFMVLGFPCNQFGGQEPGTAEDIL 529091 Score = 32.3 bits (72), Expect = 2.0, Method: Composition-based stats. Identities = 21/77 (27%), Positives = 33/77 (42%) Frame = +1 Query: 139 DVNGEKEQKFYTFLKNSCPPTSELLGTSDRLFWEPMKVHDIRWNFEKFLVGPDGIPIMRW 198 DVNGE + FLK + +DI+WNF KFL+ + P R+ Sbjct: 529216 DVNGENAHPLFNFLKKKL---------------DGFITNDIKWNFTKFLI-VNHEPSKRY 529347 Query: 199 HHRTTVSNVKMDILSYM 215 T+ ++ DI+ + Sbjct: 529348 GTSTSPLEIESDIVQAL 529398 >supercont1.5 of Phytophthora infestans Length = 4768765 Score = 32.0 bits (71), Expect = 2.7, Method: Composition-based stats. Identities = 14/38 (36%), Positives = 21/38 (55%), Gaps = 2/38 (5%) Frame = +2 Query: 155 SCPPTSELLGTSDRLFWEPMKVHDIRW--NFEKFLVGP 190 SCP TS+ G+S R +W + I+W ++ VGP Sbjct: 2678933 SCPSTSKSCGSSRRPYWATHSANPIKWLCSWTALRVGP 2679046 >supercont1.45 of Phytophthora infestans Length = 1286539 Score = 31.2 bits (69), Expect = 4.2, Method: Composition-based stats. Identities = 22/75 (29%), Positives = 35/75 (46%) Frame = -3 Query: 117 PTLKYVRPGGGFVPNFQLFEKGDVNGEKEQKFYTFLKNSCPPTSELLGTSDRLFWEPMKV 176 P + P GG Q+ + G+ + K YTF + PTS L S +L +P+K Sbjct: 385364 PLYPFQTPSGGLGILTQVMIR*QNKGKVKAKRYTFADSPVQPTSHL--NSSQLVEKPIKK 385191 Query: 177 HDIRWNFEKFLVGPD 191 D+R + K + P+ Sbjct: 385190 TDMRKSALKKMQAPE 385146 TBLASTN 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= SPP00000007_1.0 # Prot # Glutathione peroxidase 4 (GPx4) # Hs (197 letters) Database: genome.fa 4921 sequences; 228,543,505 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value supercont1.67 of Phytophthora infestans 155 1e-37 supercont1.56 of Phytophthora infestans 146 5e-35 supercont1.8 of Phytophthora infestans 102 1e-21 supercont1.36 of Phytophthora infestans 57 8e-19 supercont1.21 of Phytophthora infestans 76 1e-13 supercont1.3 of Phytophthora infestans 69 2e-11 supercont1.80 of Phytophthora infestans 30 4.8 >supercont1.67 of Phytophthora infestans Length = 703539 Score = 155 bits (392), Expect = 1e-37, Method: Composition-based stats. Identities = 74/156 (47%), Positives = 101/156 (64%) Frame = -2 Query: 38 ARSMHEFSAKDIDGHMVNLDKYRGFVCIVTNVASQUGKTEVNYTQLVDLHARYAECGLRI 97 A+S +E D+D V+++ Y+G V +V NV+S+ G T NY +L LH +Y E GL + Sbjct: 225836 AKSFYELKDFDMDKKEVSMEDYKGKVVLVVNVSSKCGLTPTNYPELQQLHEKYHEEGLVV 225657 Query: 98 LAFPCNQFGKQEPGSNEEIKEFAAGYNVKFDMFSKICVNGDDAHPLWKWMKIQPKGKGIL 157 L FPCNQF QEPG++EEI EF YNV F +F K VNG +A P++ ++K K G Sbjct: 225656 LGFPCNQFAGQEPGTHEEILEFVKQYNVTFPLFEKHDVNGSNARPVFTYLK--AKLPGTF 225483 Query: 158 GNAIKWNFTKFLIDKNGCVVKRYGPMEEPLVIEKDL 193 GN IKWNFTKFL+D+NG KR+ P + P E+D+ Sbjct: 225482 GNYIKWNFTKFLVDRNGQPFKRFAPKDLPPSFEEDI 225375 Score = 150 bits (378), Expect = 5e-36, Method: Composition-based stats. Identities = 71/155 (45%), Positives = 100/155 (64%) Frame = -1 Query: 39 RSMHEFSAKDIDGHMVNLDKYRGFVCIVTNVASQUGKTEVNYTQLVDLHARYAECGLRIL 98 +S +E D+ G+ V++ KY+G V + NV+S+ G T NY +L L+ +Y E GL +L Sbjct: 230970 KSFYELKDFDMAGNEVSMSKYKGKVVLAVNVSSKCGLTPTNYPELQTLYEKYKEEGLEVL 230791 Query: 99 AFPCNQFGKQEPGSNEEIKEFAAGYNVKFDMFSKICVNGDDAHPLWKWMKIQPKGKGILG 158 AFPCNQF QEPG++EEI EF YNV F F K VNG A P++ ++K K G G Sbjct: 230790 AFPCNQFAGQEPGTHEEIMEFVKQYNVTFPFFEKHDVNGATARPVFTYLKT--KLPGSFG 230617 Query: 159 NAIKWNFTKFLIDKNGCVVKRYGPMEEPLVIEKDL 193 + +KWNFTKFL+D+NG KR+ P + PL E+++ Sbjct: 230616 DFVKWNFTKFLVDRNGQPYKRFAPKDRPLSFEEEI 230512 Score = 149 bits (376), Expect = 7e-36, Method: Composition-based stats. Identities = 70/155 (45%), Positives = 101/155 (65%) Frame = -1 Query: 39 RSMHEFSAKDIDGHMVNLDKYRGFVCIVTNVASQUGKTEVNYTQLVDLHARYAECGLRIL 98 +S +E ++ G+ V++ KY+G V + NV+S+ G T NY +L L+ +Y + GL +L Sbjct: 179142 KSFYELKDFNMAGNEVSMSKYKGKVVLAVNVSSKCGLTPTNYPELQTLYEKYKDEGLEVL 178963 Query: 99 AFPCNQFGKQEPGSNEEIKEFAAGYNVKFDMFSKICVNGDDAHPLWKWMKIQPKGKGILG 158 AFPCNQF QEPG++EEI EF YNV F F K VNG A P++ ++K K G G Sbjct: 178962 AFPCNQFAGQEPGAHEEIMEFVKQYNVTFPFFEKHDVNGATARPVFTYLKT--KLPGSFG 178789 Query: 159 NAIKWNFTKFLIDKNGCVVKRYGPMEEPLVIEKDL 193 + +KWNFTKFL+D+NG KR+ P + PL +E+D+ Sbjct: 178788 DFVKWNFTKFLVDRNGQPYKRFAPKDRPLSLEEDI 178684 Score = 81.3 bits (199), Expect = 3e-15, Method: Composition-based stats. Identities = 52/158 (32%), Positives = 84/158 (53%), Gaps = 4/158 (2%) Frame = -2 Query: 40 SMHEFSAKDIDGHMVNLDKYRGFVCIVTNVASQUGKTEV-NYTQLVDLHARYAECGLRIL 98 S++ D G+ L + RG V ++TNV+S + QL +L ++Y + GL ++ Sbjct: 223721 SLYSLRDTDASGNTFCLSELRGHVALLTNVSSGTCSSNAKQLQQLEELSSKYVDAGLTVV 223542 Query: 99 AFPCNQFGKQEPGSNEEIKE-FAAGYNVKFDMFSKICVNGDDAHPLWKWMKIQ-PKGKGI 156 AFP QFG E G++E++ E F + V F + + VNG A + K + P Sbjct: 223541 AFPSAQFGDGEFGNDEDLVEYFHELFGVNFPVLATRDVNGPSARDAMLFCKTRLPGAAKS 223362 Query: 157 LGNA-IKWNFTKFLIDKNGCVVKRYGPMEEPLVIEKDL 193 NA I+ N+ KFL+ ++G + KRYG + PL +E D+ Sbjct: 223361 AANAFIENNYVKFLVGRDGHLFKRYGACDLPLSMETDI 223248 >supercont1.56 of Phytophthora infestans Length = 775166 Score = 146 bits (369), Expect = 5e-35, Method: Composition-based stats. Identities = 69/155 (44%), Positives = 100/155 (64%) Frame = -3 Query: 39 RSMHEFSAKDIDGHMVNLDKYRGFVCIVTNVASQUGKTEVNYTQLVDLHARYAECGLRIL 98 +S +E ++ G+ V++ KY+G V + NV+S+ G T NY +L L+ +Y + GL +L Sbjct: 626100 KSFYELKDFNMAGNEVSMSKYKGKVVLAVNVSSKCGLTPTNYPELQTLYEKYKDEGLEVL 625921 Query: 99 AFPCNQFGKQEPGSNEEIKEFAAGYNVKFDMFSKICVNGDDAHPLWKWMKIQPKGKGILG 158 AFPCNQF QEPG++EEI EF YNV F F K VNG A P++ ++K K G G Sbjct: 625920 AFPCNQFAGQEPGTHEEIMEFVKQYNVTFPFFEKHYVNGATARPVFTYLKT--KLPGSFG 625747 Query: 159 NAIKWNFTKFLIDKNGCVVKRYGPMEEPLVIEKDL 193 + +KWNFTKFL+D+N KR+ P + PL +E+D+ Sbjct: 625746 DFVKWNFTKFLVDRNRQPYKRFAPKDRPLSLEEDI 625642 >supercont1.8 of Phytophthora infestans Length = 3946259 Score = 102 bits (254), Expect = 1e-21, Method: Composition-based stats. Identities = 58/131 (44%), Positives = 74/131 (56%) Frame = +3 Query: 63 VCIVTNVASQUGKTEVNYTQLVDLHARYAECGLRILAFPCNQFGKQEPGSNEEIKEFAAG 122 V +V N+ S+ G T NY +L LH + GL L FP N+F EPG++EEI E Sbjct: 1504167 VVLVVNMTSKCGLTPTNYPELQQLHEKCQREGLVGLGFP*NKFAGPEPGTHEEILELVKP 1504346 Query: 123 YNVKFDMFSKICVNGDDAHPLWKWMKIQPKGKGILGNAIKWNFTKFLIDKNGCVVKRYGP 182 YNV F M K VNG A P++ +K K GN IK N TKFL+D+NG KRY P Sbjct: 1504347 YNVMFLMLEKHDVNGSSAPPVFTHLK--AKLSCTFGNYIK*NNTKFLVDRNGQPYKRYAP 1504520 Query: 183 MEEPLVIEKDL 193 + PL E+D+ Sbjct: 1504521 KDLPLSFEEDI 1504553 >supercont1.36 of Phytophthora infestans Length = 1665391 Score = 57.0 bits (136), Expect(2) = 8e-19, Method: Composition-based stats. Identities = 31/59 (52%), Positives = 38/59 (64%) Frame = +1 Query: 135 VNGDDAHPLWKWMKIQPKGKGILGNAIKWNFTKFLIDKNGCVVKRYGPMEEPLVIEKDL 193 VNG++AHPL+ ++K K G + N IKWNFTKFLI N KRYG PL IE D+ Sbjct: 529219 VNGENAHPLFNFLK--KKLDGFITNDIKWNFTKFLI-VNHEPSKRYGTSTSPLEIESDI 529386 Score = 56.2 bits (134), Expect(2) = 8e-19, Method: Composition-based stats. Identities = 25/56 (44%), Positives = 39/56 (69%), Gaps = 1/56 (1%) Frame = +3 Query: 85 DLHARYAECGLRILAFPCNQFGKQEPGSNEEIKEFAA-GYNVKFDMFSKICVNGDD 139 +L+ +Y + G +L FPCNQFG QEPG+ E+I +FA Y+V F +F+K+ G++ Sbjct: 528993 ELYEKYHDEGFMVLGFPCNQFGGQEPGTAEDILKFAQEKYHVTFPLFNKVGSYGEN 529160 >supercont1.21 of Phytophthora infestans Length = 2319577 Score = 75.9 bits (185), Expect = 1e-13, Method: Composition-based stats. Identities = 50/132 (37%), Positives = 67/132 (50%) Frame = -2 Query: 59 YRGFVCIVTNVASQUGKTEVNYTQLVDLHARYAECGLRILAFPCNQFGKQEPGSNEEIKE 118 +R +V N AS+ G QL LH +Y+E GL ++A P N F QEPG ++I + Sbjct: 225291 FRFKAALVVNTASKCGHAG-QLKQLQALHEKYSEQGLIVVAVPSNDFAGQEPGKVDDILK 225115 Query: 119 FAAGYNVKFDMFSKICVNGDDAHPLWKWMKIQPKGKGILGNAIKWNFTKFLIDKNGCVVK 178 A V F + + V GD AHP +K KI K + A WNF KFL+D G + Sbjct: 225114 RYADCGVTFAIAERTPVAGDKAHPFFK--KIADKYSTSV--APTWNFDKFLVDHRGDMRA 224947 Query: 179 RYGPMEEPLVIE 190 + EPLV E Sbjct: 224946 VFPNDTEPLVTE 224911 >supercont1.3 of Phytophthora infestans Length = 5458067 Score = 68.9 bits (167), Expect = 2e-11, Method: Composition-based stats. Identities = 41/118 (34%), Positives = 61/118 (51%), Gaps = 7/118 (5%) Frame = +3 Query: 39 RSMHEFSAKDIDG-HMVNLDKYRGFVCIVTNVASQUGKTEVNYTQLVDLHARYAECGLRI 97 ++ H FS + + G + L Y G ++ NVAS T Y QL +L R+ E L I Sbjct: 810402 KTAHNFSFRSLTGSKFIRLADYAGKPILIVNVASHCNSTTKAYVQLNELSKRFPE--LII 810575 Query: 98 LAFPCNQFGKQEPGSNEEIKEF------AAGYNVKFDMFSKICVNGDDAHPLWKWMKI 149 + PCNQFG QE + EEI + G+ F + K+ VNG +AH L+ +++I Sbjct: 810576 IGCPCNQFGHQENLNGEEIYQSLRHVRPGKGFETAFQLTEKVEVNGANAHALFNFLRI 810749 >supercont1.80 of Phytophthora infestans Length = 565118 Score = 30.4 bits (67), Expect = 4.8, Method: Composition-based stats. Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 5/48 (10%) Frame = +3 Query: 58 KYRGFVCIVTNVAS-----QUGKTEVNYTQLVDLHARYAECGLRILAF 100 +YRGFVCI+ +V S Q G ++ +++ D H R + GL F Sbjct: 519768 RYRGFVCIIASVVSCRVSVQRGCGKLTISRVPDCHPR-RQAGLHAFTF 519908 TBLASTN 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= SPP00000008_1.0 # Prot # Glutathione peroxidase 5 (GPx5) # Hs (221 letters) Database: genome.fa 4921 sequences; 228,543,505 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value supercont1.3 of Phytophthora infestans 119 9e-27 supercont1.67 of Phytophthora infestans 118 3e-26 supercont1.56 of Phytophthora infestans 102 1e-21 supercont1.8 of Phytophthora infestans 71 5e-12 supercont1.21 of Phytophthora infestans 56 1e-07 supercont1.36 of Phytophthora infestans 46 2e-04 supercont1.5 of Phytophthora infestans 33 0.92 supercont1.64 of Phytophthora infestans 33 1.1 supercont1.144 of Phytophthora infestans 33 1.4 supercont1.4 of Phytophthora infestans 33 1.4 supercont1.221 of Phytophthora infestans 31 4.4 >supercont1.3 of Phytophthora infestans Length = 5458067 Score = 119 bits (299), Expect = 9e-27, Method: Composition-based stats. Identities = 71/211 (33%), Positives = 106/211 (50%), Gaps = 36/211 (17%) Frame = +3 Query: 37 KGTIYDYEAIALNKNEYVSFKQYVGKHILFVNVATYCGLTAQ-YPELNALQEELKPYGLV 95 + T +++ +L ++++ Y GK IL VNVA++C T + Y +LN L + L+ Sbjct: 810399 RKTAHNFSFRSLTGSKFIRLADYAGKPILIVNVASHCNSTTKAYVQLNELSKRFPE--LI 810572 Query: 96 VLGFPCNQFGKQEPGDNKEILPGLKYVRPGGGFVPSFQLFEKGDVNGEKEQKVFSFLKHS 155 ++G PCNQFG QE + +EI L++VRPG GF +FQL EK +VNG +F+FL+ + Sbjct: 810573 IIGCPCNQFGHQENLNGEEIYQSLRHVRPGKGFETAFQLTEKVEVNGANAHALFNFLRIT 810752 Query: 156 CPHP---------SEILGTFK---SISWDPVKVHDIRWNFEK------------------ 185 P+P S G F + W PV D+ WNFEK Sbjct: 810753 LPYPCDRTLLDEMSTPSGVFSHPMRLIWMPVTRADVSWNFEKVPHCSKLLLLRHIELLTC 810932 Query: 186 -----FLVGPDGIPVMRWSHRATVSSVKTDI 211 FL+ PDG P R+S + + + DI Sbjct: 810933 CYCVQFLISPDGTPYKRYSPKLDFTGMIEDI 811025 >supercont1.67 of Phytophthora infestans Length = 703539 Score = 118 bits (295), Expect = 3e-26, Method: Composition-based stats. Identities = 75/184 (40%), Positives = 102/184 (55%), Gaps = 1/184 (0%) Frame = -2 Query: 35 DEKGTIYDYEAIALNKNEYVSFKQYVGKHILFVNVATYCGLT-AQYPELNALQEELKPYG 93 +E + Y+ + ++K E VS + Y GK +L VNV++ CGLT YPEL L E+ G Sbjct: 225842 EEAKSFYELKDFDMDKKE-VSMEDYKGKVVLVVNVSSKCGLTPTNYPELQQLHEKYHEEG 225666 Query: 94 LVVLGFPCNQFGKQEPGDNKEILPGLKYVRPGGGFVPSFQLFEKGDVNGEKEQKVFSFLK 153 LVVLGFPCNQF QEPG ++EIL +K + +F LFEK DVNG + VF++LK Sbjct: 225665 LVVLGFPCNQFAGQEPGTHEEILEFVKQ------YNVTFPLFEKHDVNGSNARPVFTYLK 225504 Query: 154 HSCPHPSEILGTFKSISWDPVKVHDIRWNFEKFLVGPDGIPVMRWSHRATVSSVKTDILA 213 P GTF + I+WNF KFLV +G P R++ + S + DI Sbjct: 225503 AKLP------GTFGNY---------IKWNFTKFLVDRNGQPFKRFAPKDLPPSFEEDIKE 225369 Query: 214 YLKQ 217 L + Sbjct: 225368 LLAK 225357 Score = 109 bits (272), Expect = 1e-23, Method: Composition-based stats. Identities = 70/180 (38%), Positives = 97/180 (53%), Gaps = 1/180 (0%) Frame = -1 Query: 39 TIYDYEAIALNKNEYVSFKQYVGKHILFVNVATYCGLT-AQYPELNALQEELKPYGLVVL 97 + Y+ + + NE VS +Y GK +L VNV++ CGLT YPEL L E+ K GL VL Sbjct: 179139 SFYELKDFNMAGNE-VSMSKYKGKVVLAVNVSSKCGLTPTNYPELQTLYEKYKDEGLEVL 178963 Query: 98 GFPCNQFGKQEPGDNKEILPGLKYVRPGGGFVPSFQLFEKGDVNGEKEQKVFSFLKHSCP 157 FPCNQF QEPG ++EI+ +K + +F FEK DVNG + VF++LK P Sbjct: 178962 AFPCNQFAGQEPGAHEEIMEFVKQ------YNVTFPFFEKHDVNGATARPVFTYLKTKLP 178801 Query: 158 HPSEILGTFKSISWDPVKVHDIRWNFEKFLVGPDGIPVMRWSHRATVSSVKTDILAYLKQ 217 G+F ++WNF KFLV +G P R++ + S++ DI L Q Sbjct: 178800 ------GSFGDF---------VKWNFTKFLVDRNGQPYKRFAPKDRPLSLEEDIKTLLAQ 178666 Score = 106 bits (264), Expect = 1e-22, Method: Composition-based stats. Identities = 70/184 (38%), Positives = 98/184 (53%), Gaps = 1/184 (0%) Frame = -1 Query: 39 TIYDYEAIALNKNEYVSFKQYVGKHILFVNVATYCGLT-AQYPELNALQEELKPYGLVVL 97 + Y+ + + NE VS +Y GK +L VNV++ CGLT YPEL L E+ K GL VL Sbjct: 230967 SFYELKDFDMAGNE-VSMSKYKGKVVLAVNVSSKCGLTPTNYPELQTLYEKYKEEGLEVL 230791 Query: 98 GFPCNQFGKQEPGDNKEILPGLKYVRPGGGFVPSFQLFEKGDVNGEKEQKVFSFLKHSCP 157 FPCNQF QEPG ++EI+ +K + +F FEK DVNG + VF++LK P Sbjct: 230790 AFPCNQFAGQEPGTHEEIMEFVKQ------YNVTFPFFEKHDVNGATARPVFTYLKTKLP 230629 Query: 158 HPSEILGTFKSISWDPVKVHDIRWNFEKFLVGPDGIPVMRWSHRATVSSVKTDILAYLKQ 217 G+F ++WNF KFLV +G P R++ + S + +I L Q Sbjct: 230628 ------GSFGDF---------VKWNFTKFLVDRNGQPYKRFAPKDRPLSFEEEIKTLLAQ 230494 Query: 218 FKTK 221 T+ Sbjct: 230493 KATE 230482 Score = 43.5 bits (101), Expect = 8e-04, Method: Composition-based stats. Identities = 46/158 (29%), Positives = 67/158 (42%), Gaps = 2/158 (1%) Frame = -2 Query: 61 GKHILFVNVAT-YCGLTA-QYPELNALQEELKPYGLVVLGFPCNQFGKQEPGDNKEILPG 118 G L NV++ C A Q +L L + GL V+ FP QFG E G++++++ Sbjct: 223658 GHVALLTNVSSGTCSSNAKQLQQLEELSSKYVDAGLTVVAFPSAQFGDGEFGNDEDLVEY 223479 Query: 119 LKYVRPGGGFVPSFQLFEKGDVNGEKEQKVFSFLKHSCPHPSEILGTFKSISWDPVKVHD 178 + F +F + DVNG + F K P G KS + Sbjct: 223478 FHEL-----FGVNFPVLATRDVNGPSARDAMLFCKTRLP------GAAKSAA-----NAF 223347 Query: 179 IRWNFEKFLVGPDGIPVMRWSHRATVSSVKTDILAYLK 216 I N+ KFLVG DG R+ S++TDI L+ Sbjct: 223346 IENNYVKFLVGRDGHLFKRYGACDLPLSMETDIQNLLQ 223233 >supercont1.56 of Phytophthora infestans Length = 775166 Score = 102 bits (254), Expect = 1e-21, Method: Composition-based stats. Identities = 68/180 (37%), Positives = 95/180 (52%), Gaps = 1/180 (0%) Frame = -3 Query: 39 TIYDYEAIALNKNEYVSFKQYVGKHILFVNVATYCGLT-AQYPELNALQEELKPYGLVVL 97 + Y+ + + NE VS +Y GK +L VNV++ CGLT YPEL L E+ K GL VL Sbjct: 626097 SFYELKDFNMAGNE-VSMSKYKGKVVLAVNVSSKCGLTPTNYPELQTLYEKYKDEGLEVL 625921 Query: 98 GFPCNQFGKQEPGDNKEILPGLKYVRPGGGFVPSFQLFEKGDVNGEKEQKVFSFLKHSCP 157 FPCNQF QEPG ++EI+ +K + +F FEK VNG + VF++LK P Sbjct: 625920 AFPCNQFAGQEPGTHEEIMEFVKQ------YNVTFPFFEKHYVNGATARPVFTYLKTKLP 625759 Query: 158 HPSEILGTFKSISWDPVKVHDIRWNFEKFLVGPDGIPVMRWSHRATVSSVKTDILAYLKQ 217 G+F ++WNF KFLV + P R++ + S++ DI L Q Sbjct: 625758 ------GSFGDF---------VKWNFTKFLVDRNRQPYKRFAPKDRPLSLEEDIKTLLAQ 625624 >supercont1.8 of Phytophthora infestans Length = 3946259 Score = 70.9 bits (172), Expect = 5e-12, Method: Composition-based stats. Identities = 56/155 (36%), Positives = 80/155 (51%), Gaps = 1/155 (0%) Frame = +3 Query: 64 ILFVNVATYCGLT-AQYPELNALQEELKPYGLVVLGFPCNQFGKQEPGDNKEILPGLKYV 122 +L VN+ + CGLT YPEL L E+ + GLV LGFP N+F EPG ++EI L+ V Sbjct: 1504170 VLVVNMTSKCGLTPTNYPELQQLHEKCQREGLVGLGFP*NKFAGPEPGTHEEI---LELV 1504340 Query: 123 RPGGGFVPSFQLFEKGDVNGEKEQKVFSFLKHSCPHPSEILGTFKSISWDPVKVHDIRWN 182 +P + F + EK DVNG VF+ LK +++ TF + I+ N Sbjct: 1504341 KP---YNVMFLMLEKHDVNGSSAPPVFTHLK------AKLSCTFGNY---------IK*N 1504466 Query: 183 FEKFLVGPDGIPVMRWSHRATVSSVKTDILAYLKQ 217 KFLV +G P R++ + S + DI L + Sbjct: 1504467 NTKFLVDRNGQPYKRYAPKDLPLSFEEDIKELLAK 1504571 >supercont1.21 of Phytophthora infestans Length = 2319577 Score = 56.2 bits (134), Expect = 1e-07, Method: Composition-based stats. Identities = 43/131 (32%), Positives = 56/131 (42%) Frame = -2 Query: 62 KHILFVNVATYCGLTAQYPELNALQEELKPYGLVVLGFPCNQFGKQEPGDNKEILPGLKY 121 K L VN A+ CG Q +L AL E+ GL+V+ P N F QEPG +IL +Y Sbjct: 225282 KAALVVNTASKCGHAGQLKQLQALHEKYSEQGLIVVAVPSNDFAGQEPGKVDDILK--RY 225109 Query: 122 VRPGGGFVPSFQLFEKGDVNGEKEQKVFSFLKHSCPHPSEILGTFKSISWDPVKVHDIRW 181 G +F + E+ V G+K F + S S P W Sbjct: 225108 ADCG----VTFAIAERTPVAGDKAHPFFKKIADK-----------YSTSVAPT------W 224992 Query: 182 NFEKFLVGPDG 192 NF+KFLV G Sbjct: 224991 NFDKFLVDHRG 224959 >supercont1.36 of Phytophthora infestans Length = 1665391 Score = 45.8 bits (107), Expect = 2e-04, Method: Composition-based stats. Identities = 22/60 (36%), Positives = 34/60 (56%) Frame = +3 Query: 57 KQYVGKHILFVNVATYCGLTAQYPELNALQEELKPYGLVVLGFPCNQFGKQEPGDNKEIL 116 + ++ + + N T+C + + L E+ G +VLGFPCNQFG QEPG ++IL Sbjct: 528930 RSFLLRRVERANSKTFCAIAQE------LYEKYHDEGFMVLGFPCNQFGGQEPGTAEDIL 529091 Score = 34.7 bits (78), Expect = 0.31, Method: Composition-based stats. Identities = 23/77 (29%), Positives = 35/77 (45%) Frame = +1 Query: 139 DVNGEKEQKVFSFLKHSCPHPSEILGTFKSISWDPVKVHDIRWNFEKFLVGPDGIPVMRW 198 DVNGE +F+FLK D +DI+WNF KFL+ + P R+ Sbjct: 529216 DVNGENAHPLFNFLKKKL---------------DGFITNDIKWNFTKFLI-VNHEPSKRY 529347 Query: 199 SHRATVSSVKTDILAYL 215 + +++DI+ L Sbjct: 529348 GTSTSPLEIESDIVQAL 529398 >supercont1.5 of Phytophthora infestans Length = 4768765 Score = 33.1 bits (74), Expect = 0.92, Method: Composition-based stats. Identities = 13/29 (44%), Positives = 19/29 (65%) Frame = -1 Query: 179 IRWNFEKFLVGPDGIPVMRWSHRATVSSV 207 +RWN + + P GIPV R+S R V++V Sbjct: 2503885 MRWNVDGAFIRPKGIPVNRYSPRLVVNAV 2503799 >supercont1.64 of Phytophthora infestans Length = 723960 Score = 33.1 bits (74), Expect = 1.1, Method: Composition-based stats. Identities = 13/29 (44%), Positives = 19/29 (65%) Frame = -3 Query: 179 IRWNFEKFLVGPDGIPVMRWSHRATVSSV 207 +RWN + + P GI V R+SHR V++V Sbjct: 386359 MRWNVDGAFIRPKGILVNRYSHRLVVNAV 386273 >supercont1.144 of Phytophthora infestans Length = 265140 Score = 32.7 bits (73), Expect = 1.4, Method: Composition-based stats. Identities = 16/29 (55%), Positives = 20/29 (68%), Gaps = 1/29 (3%) Frame = -3 Query: 58 QYVGKHILFVNVA-TYCGLTAQYPELNAL 85 +Y G H L + VA TYC TAQ PEL++L Sbjct: 57709 EYRGLHDLLIRVAYTYCA*TAQSPELDSL 57623 >supercont1.4 of Phytophthora infestans Length = 5137561 Score = 32.7 bits (73), Expect = 1.4, Method: Composition-based stats. Identities = 22/75 (29%), Positives = 34/75 (45%), Gaps = 1/75 (1%) Frame = +1 Query: 85 LQEELKPYGLVVLGFPCNQFGKQEPGDNKEILPGLKYVRPGGGFVPSFQLFEK-GDVNGE 143 ++ EL+P+G V+GF GD+++ILP LK F+LF G Sbjct: 3957136 MKNELEPFGGKVMGF---------SGDHRQILPVLKDATRAETIQACFKLFAPMGAFASS 3957288 Query: 144 KEQKVFSFLKHSCPH 158 + +H+CPH Sbjct: 3957289 AADR-----EHACPH 3957318 Score = 31.2 bits (69), Expect = 4.4, Method: Composition-based stats. Identities = 16/43 (37%), Positives = 27/43 (62%) Frame = +1 Query: 48 LNKNEYVSFKQYVGKHILFVNVATYCGLTAQYPELNALQEELK 90 L N V F+++VGK ILFV+ G+ + +++ALQE ++ Sbjct: 3463120 LTTNVVVCFQKFVGKTILFVHTGGQFGM---FDKVDALQEVIR 3463239 >supercont1.221 of Phytophthora infestans Length = 99505 Score = 31.2 bits (69), Expect = 4.4, Method: Composition-based stats. Identities = 16/43 (37%), Positives = 27/43 (62%) Frame = +3 Query: 48 LNKNEYVSFKQYVGKHILFVNVATYCGLTAQYPELNALQEELK 90 L N V F+++VGK ILFV+ G+ + +++ALQE ++ Sbjct: 21231 LTTNVVVCFQKFVGKTILFVHTGGQFGM---FDKVDALQEVIR 21350 TBLASTN 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= SPP00000009_1.0 # Prot # Glutathione peroxidase 6 (GPx6) # Hs (221 letters) Database: genome.fa 4921 sequences; 228,543,505 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value supercont1.3 of Phytophthora infestans 102 2e-21 supercont1.67 of Phytophthora infestans 100 1e-20 supercont1.56 of Phytophthora infestans 92 2e-18 supercont1.8 of Phytophthora infestans 58 3e-08 supercont1.21 of Phytophthora infestans 55 3e-07 supercont1.36 of Phytophthora infestans 41 0.004 >supercont1.3 of Phytophthora infestans Length = 5458067 Score = 102 bits (253), Expect = 2e-21, Method: Composition-based stats. Identities = 64/192 (33%), Positives = 91/192 (47%), Gaps = 36/192 (18%) Frame = +3 Query: 39 TIYEYGALTLNGEEYIQFKQFAGKHVLFVNVAAYUGLAAQ-YPELNALQEELKNFGVIVL 97 T + + +L G ++I+ +AGK +L VNVA++ + Y +LN L + +I++ Sbjct: 810405 TAHNFSFRSLTGSKFIRLADYAGKPILIVNVASHCNSTTKAYVQLNELSKRFPE--LIII 810578 Query: 98 AFPCNQFGKQEPGTNSEILLGLKYVCPGSGFVPSFQLFEKGDVNGEKEQKVFTFLKNSCP 157 PCNQFG QE EI L++V PG GF +FQL EK +VNG +F FL+ + P Sbjct: 810579 GCPCNQFGHQENLNGEEIYQSLRHVRPGKGFETAFQLTEKVEVNGANAHALFNFLRITLP 810758 Query: 158 PTSD--LLGSSS----------QLFWEPMKVHDIRWNFEK-------------------- 185 D LL S +L W P+ D+ WNFEK Sbjct: 810759 YPCDRTLLDEMSTPSGVFSHPMRLIWMPVTRADVSWNFEKVPHCSKLLLLRHIELLTCCY 810938 Query: 186 ---FLVGPDGVP 194 FL+ PDG P Sbjct: 810939 CVQFLISPDGTP 810974 >supercont1.67 of Phytophthora infestans Length = 703539 Score = 99.8 bits (247), Expect = 1e-20, Method: Composition-based stats. Identities = 67/180 (37%), Positives = 93/180 (51%), Gaps = 1/180 (0%) Frame = -2 Query: 39 TIYEYGALTLNGEEYIQFKQFAGKHVLFVNVAAYUGLA-AQYPELNALQEELKNFGVIVL 97 + YE ++ +E + + + GK VL VNV++ GL YPEL L E+ G++VL Sbjct: 225830 SFYELKDFDMDKKE-VSMEDYKGKVVLVVNVSSKCGLTPTNYPELQQLHEKYHEEGLVVL 225654 Query: 98 AFPCNQFGKQEPGTNSEILLGLKYVCPGSGFVPSFQLFEKGDVNGEKEQKVFTFLKNSCP 157 FPCNQF QEPGT+ EIL +K + +F LFEK DVNG + VFT+LK P Sbjct: 225653 GFPCNQFAGQEPGTHEEILEFVKQ------YNVTFPLFEKHDVNGSNARPVFTYLKAKLP 225492 Query: 158 PTSDLLGSSSQLFWEPMKVHDIRWNFEKFLVGPDGVPVMHWFHQAPVSTVKSDILEYLKQ 217 T G+ I+WNF KFLV +G P + + + + DI E L + Sbjct: 225491 GT---FGNY------------IKWNFTKFLVDRNGQPFKRFAPKDLPPSFEEDIKELLAK 225357 Score = 96.3 bits (238), Expect = 1e-19, Method: Composition-based stats. Identities = 66/180 (36%), Positives = 91/180 (50%), Gaps = 1/180 (0%) Frame = -1 Query: 39 TIYEYGALTLNGEEYIQFKQFAGKHVLFVNVAAYUGLA-AQYPELNALQEELKNFGVIVL 97 + YE + G E + ++ GK VL VNV++ GL YPEL L E+ K+ G+ VL Sbjct: 179139 SFYELKDFNMAGNE-VSMSKYKGKVVLAVNVSSKCGLTPTNYPELQTLYEKYKDEGLEVL 178963 Query: 98 AFPCNQFGKQEPGTNSEILLGLKYVCPGSGFVPSFQLFEKGDVNGEKEQKVFTFLKNSCP 157 AFPCNQF QEPG + EI+ +K + +F FEK DVNG + VFT+LK P Sbjct: 178962 AFPCNQFAGQEPGAHEEIMEFVKQ------YNVTFPFFEKHDVNGATARPVFTYLKTKLP 178801 Query: 158 PTSDLLGSSSQLFWEPMKVHDIRWNFEKFLVGPDGVPVMHWFHQAPVSTVKSDILEYLKQ 217 GS ++WNF KFLV +G P + + +++ DI L Q Sbjct: 178800 ------GSFGDF---------VKWNFTKFLVDRNGQPYKRFAPKDRPLSLEEDIKTLLAQ 178666 Score = 95.9 bits (237), Expect = 1e-19, Method: Composition-based stats. Identities = 63/157 (40%), Positives = 82/157 (52%), Gaps = 1/157 (0%) Frame = -1 Query: 39 TIYEYGALTLNGEEYIQFKQFAGKHVLFVNVAAYUGLA-AQYPELNALQEELKNFGVIVL 97 + YE + G E + ++ GK VL VNV++ GL YPEL L E+ K G+ VL Sbjct: 230967 SFYELKDFDMAGNE-VSMSKYKGKVVLAVNVSSKCGLTPTNYPELQTLYEKYKEEGLEVL 230791 Query: 98 AFPCNQFGKQEPGTNSEILLGLKYVCPGSGFVPSFQLFEKGDVNGEKEQKVFTFLKNSCP 157 AFPCNQF QEPGT+ EI+ +K + +F FEK DVNG + VFT+LK P Sbjct: 230790 AFPCNQFAGQEPGTHEEIMEFVKQ------YNVTFPFFEKHDVNGATARPVFTYLKTKLP 230629 Query: 158 PTSDLLGSSSQLFWEPMKVHDIRWNFEKFLVGPDGVP 194 GS ++WNF KFLV +G P Sbjct: 230628 ------GSFGDF---------VKWNFTKFLVDRNGQP 230563 Score = 44.3 bits (103), Expect = 5e-04, Method: Composition-based stats. Identities = 41/158 (25%), Positives = 65/158 (41%), Gaps = 2/158 (1%) Frame = -2 Query: 37 TGTIYEYGALTLNGEEYIQFKQFAGKHVLFVNVAA--YUGLAAQYPELNALQEELKNFGV 94 T ++Y +G + + G L NV++ A Q +L L + + G+ Sbjct: 223727 TASLYSLRDTDASGNTFC-LSELRGHVALLTNVSSGTCSSNAKQLQQLEELSSKYVDAGL 223551 Query: 95 IVLAFPCNQFGKQEPGTNSEILLGLKYVCPGSGFVPSFQLFEKGDVNGEKEQKVFTFLKN 154 V+AFP QFG E G + +++ + F +F + DVNG + F K Sbjct: 223550 TVVAFPSAQFGDGEFGNDEDLVEYFHEL-----FGVNFPVLATRDVNGPSARDAMLFCKT 223386 Query: 155 SCPPTSDLLGSSSQLFWEPMKVHDIRWNFEKFLVGPDG 192 P + S++ F E N+ KFLVG DG Sbjct: 223385 RLPGAAK---SAANAFIEN--------NYVKFLVGRDG 223305 >supercont1.56 of Phytophthora infestans Length = 775166 Score = 91.7 bits (226), Expect = 2e-18, Method: Composition-based stats. Identities = 65/180 (36%), Positives = 90/180 (50%), Gaps = 1/180 (0%) Frame = -3 Query: 39 TIYEYGALTLNGEEYIQFKQFAGKHVLFVNVAAYUGLA-AQYPELNALQEELKNFGVIVL 97 + YE + G E + ++ GK VL VNV++ GL YPEL L E+ K+ G+ VL Sbjct: 626097 SFYELKDFNMAGNE-VSMSKYKGKVVLAVNVSSKCGLTPTNYPELQTLYEKYKDEGLEVL 625921 Query: 98 AFPCNQFGKQEPGTNSEILLGLKYVCPGSGFVPSFQLFEKGDVNGEKEQKVFTFLKNSCP 157 AFPCNQF QEPGT+ EI+ +K + +F FEK VNG + VFT+LK P Sbjct: 625920 AFPCNQFAGQEPGTHEEIMEFVKQ------YNVTFPFFEKHYVNGATARPVFTYLKTKLP 625759 Query: 158 PTSDLLGSSSQLFWEPMKVHDIRWNFEKFLVGPDGVPVMHWFHQAPVSTVKSDILEYLKQ 217 GS ++WNF KFLV + P + + +++ DI L Q Sbjct: 625758 ------GSFGDF---------VKWNFTKFLVDRNRQPYKRFAPKDRPLSLEEDIKTLLAQ 625624 >supercont1.8 of Phytophthora infestans Length = 3946259 Score = 58.2 bits (139), Expect = 3e-08, Method: Composition-based stats. Identities = 53/155 (34%), Positives = 72/155 (46%), Gaps = 1/155 (0%) Frame = +3 Query: 64 VLFVNVAAYUGLA-AQYPELNALQEELKNFGVIVLAFPCNQFGKQEPGTNSEILLGLKYV 122 VL VN+ + GL YPEL L E+ + G++ L FP N+F EPGT+ EI L+ V Sbjct: 1504170 VLVVNMTSKCGLTPTNYPELQQLHEKCQREGLVGLGFP*NKFAGPEPGTHEEI---LELV 1504340 Query: 123 CPGSGFVPSFQLFEKGDVNGEKEQKVFTFLKNSCPPTSDLLGSSSQLFWEPMKVHDIRWN 182 P + F + EK DVNG VFT LK T G+ I+ N Sbjct: 1504341 KP---YNVMFLMLEKHDVNGSSAPPVFTHLKAKLSCT---FGNY------------IK*N 1504466 Query: 183 FEKFLVGPDGVPVMHWFHQAPVSTVKSDILEYLKQ 217 KFLV +G P + + + + DI E L + Sbjct: 1504467 NTKFLVDRNGQPYKRYAPKDLPLSFEEDIKELLAK 1504571 >supercont1.21 of Phytophthora infestans Length = 2319577 Score = 55.1 bits (131), Expect = 3e-07, Method: Composition-based stats. Identities = 45/140 (32%), Positives = 60/140 (42%), Gaps = 4/140 (2%) Frame = -2 Query: 57 KQFAGKHVLFVNVAAYUGLAAQYPELNALQEELKNFGVIVLAFPCNQFGKQEPGTNSEIL 116 + F K L VN A+ G A Q +L AL E+ G+IV+A P N F QEPG +IL Sbjct: 225297 QDFRFKAALVVNTASKCGHAGQLKQLQALHEKYSEQGLIVVAVPSNDFAGQEPGKVDDIL 225118 Query: 117 LGLKYVCPGSGFVPSFQLFEKGDVNGEKEQKVFTFLKN----SCPPTSDLLGSSSQLFWE 172 +Y G +F + E+ V G+K F + + S PT Sbjct: 225117 K--RYADCGV----TFAIAERTPVAGDKAHPFFKKIADKYSTSVAPT------------- 224995 Query: 173 PMKVHDIRWNFEKFLVGPDG 192 WNF+KFLV G Sbjct: 224994 --------WNFDKFLVDHRG 224959 >supercont1.36 of Phytophthora infestans Length = 1665391 Score = 41.2 bits (95), Expect = 0.004, Method: Composition-based stats. Identities = 19/32 (59%), Positives = 23/32 (71%) Frame = +3 Query: 85 LQEELKNFGVIVLAFPCNQFGKQEPGTNSEIL 116 L E+ + G +VL FPCNQFG QEPGT +IL Sbjct: 528996 LYEKYHDEGFMVLGFPCNQFGGQEPGTAEDIL 529091 Score = 32.0 bits (71), Expect = 2.5, Method: Composition-based stats. Identities = 17/50 (34%), Positives = 22/50 (44%) Frame = +1 Query: 139 DVNGEKEQKVFTFLKNSCPPTSDLLGSSSQLFWEPMKVHDIRWNFEKFLV 188 DVNGE +F FLK + +DI+WNF KFL+ Sbjct: 529216 DVNGENAHPLFNFLKKKL---------------DGFITNDIKWNFTKFLI 529320 TBLASTN 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= SPP00000010_1.0 # Prot # Glutathione peroxidase 7 (GPx7) # Hs (187 letters) Database: genome.fa 4921 sequences; 228,543,505 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value supercont1.67 of Phytophthora infestans 113 5e-25 supercont1.56 of Phytophthora infestans 108 1e-23 supercont1.36 of Phytophthora infestans 57 2e-16 supercont1.21 of Phytophthora infestans 63 7e-10 supercont1.3 of Phytophthora infestans 60 6e-09 supercont1.8 of Phytophthora infestans 60 7e-09 >supercont1.67 of Phytophthora infestans Length = 703539 Score = 113 bits (282), Expect = 5e-25, Method: Composition-based stats. Identities = 61/146 (41%), Positives = 85/146 (58%), Gaps = 4/146 (2%) Frame = -2 Query: 20 QQEQDFYDFKAVNIRGKLVSLEKYRGSVSLVVNVASECGFTDQHYRALQQLQRDLGPHHF 79 ++ + FY+ K ++ K VS+E Y+G V LVVNV+S+CG T +Y LQQL Sbjct: 225842 EEAKSFYELKDFDMDKKEVSMEDYKGKVVLVVNVSSKCGLTPTNYPELQQLHEKYHEEGL 225663 Query: 80 NVLAFPCNQFGQQEPDSNKEIESFARRTYSVSFPMFSKIAVTGTGAHPAFKYLAQ----T 135 VL FPCNQF QEP +++EI F ++ Y+V+FP+F K V G+ A P F YL T Sbjct: 225662 VVLGFPCNQFAGQEPGTHEEILEFVKQ-YNVTFPLFEKHDVNGSNARPVFTYLKAKLPGT 225486 Query: 136 SGKEPTWNFWKYLVAPDGKVVGAWDP 161 G WNF K+LV +G+ + P Sbjct: 225485 FGNYIKWNFTKFLVDRNGQPFKRFAP 225408 Score = 110 bits (276), Expect = 3e-24, Method: Composition-based stats. Identities = 63/152 (41%), Positives = 85/152 (55%), Gaps = 7/152 (4%) Frame = -1 Query: 23 QDFYDFKAVNIRGKLVSLEKYRGSVSLVVNVASECGFTDQHYRALQQLQRDLGPHHFNVL 82 + FY+ K N+ G VS+ KY+G V L VNV+S+CG T +Y LQ L VL Sbjct: 179142 KSFYELKDFNMAGNEVSMSKYKGKVVLAVNVSSKCGLTPTNYPELQTLYEKYKDEGLEVL 178963 Query: 83 AFPCNQFGQQEPDSNKEIESFARRTYSVSFPMFSKIAVTGTGAHPAFKYLAQ----TSGK 138 AFPCNQF QEP +++EI F ++ Y+V+FP F K V G A P F YL + G Sbjct: 178962 AFPCNQFAGQEPGAHEEIMEFVKQ-YNVTFPFFEKHDVNGATARPVFTYLKTKLPGSFGD 178786 Query: 139 EPTWNFWKYLVAPDGKVVGAWDPT---VSVEE 167 WNF K+LV +G+ + P +S+EE Sbjct: 178785 FVKWNFTKFLVDRNGQPYKRFAPKDRPLSLEE 178690 Score = 107 bits (268), Expect = 2e-23, Method: Composition-based stats. Identities = 59/143 (41%), Positives = 80/143 (55%), Gaps = 4/143 (2%) Frame = -1 Query: 23 QDFYDFKAVNIRGKLVSLEKYRGSVSLVVNVASECGFTDQHYRALQQLQRDLGPHHFNVL 82 + FY+ K ++ G VS+ KY+G V L VNV+S+CG T +Y LQ L VL Sbjct: 230970 KSFYELKDFDMAGNEVSMSKYKGKVVLAVNVSSKCGLTPTNYPELQTLYEKYKEEGLEVL 230791 Query: 83 AFPCNQFGQQEPDSNKEIESFARRTYSVSFPMFSKIAVTGTGAHPAFKYLAQ----TSGK 138 AFPCNQF QEP +++EI F ++ Y+V+FP F K V G A P F YL + G Sbjct: 230790 AFPCNQFAGQEPGTHEEIMEFVKQ-YNVTFPFFEKHDVNGATARPVFTYLKTKLPGSFGD 230614 Query: 139 EPTWNFWKYLVAPDGKVVGAWDP 161 WNF K+LV +G+ + P Sbjct: 230613 FVKWNFTKFLVDRNGQPYKRFAP 230545 Score = 53.1 bits (126), Expect = 7e-07, Method: Composition-based stats. Identities = 41/154 (26%), Positives = 69/154 (44%), Gaps = 12/154 (7%) Frame = -2 Query: 25 FYDFKAVNIRGKLVSLEKYRGSVSLVVNVAS-ECGFTDQHYRALQQLQRDLGPHHFNVLA 83 Y + + G L + RG V+L+ NV+S C + + L++L V+A Sbjct: 223718 LYSLRDTDASGNTFCLSELRGHVALLTNVSSGTCSSNAKQLQQLEELSSKYVDAGLTVVA 223539 Query: 84 FPCNQFGQQEPDSNKEIESFARRTYSVSFPMFSKIAVTGTGAHPAFKYL-AQTSGKEPTW 142 FP QFG E +++++ + + V+FP+ + V G A A + + G + Sbjct: 223538 FPSAQFGDGEFGNDEDLVEYFHELFGVNFPVLATRDVNGPSARDAMLFCKTRLPGAAKSA 223359 Query: 143 -------NFWKYLVAPDG---KVVGAWDPTVSVE 166 N+ K+LV DG K GA D +S+E Sbjct: 223358 ANAFIENNYVKFLVGRDGHLFKRYGACDLPLSME 223257 >supercont1.56 of Phytophthora infestans Length = 775166 Score = 108 bits (270), Expect = 1e-23, Method: Composition-based stats. Identities = 58/131 (44%), Positives = 75/131 (57%), Gaps = 4/131 (3%) Frame = -3 Query: 23 QDFYDFKAVNIRGKLVSLEKYRGSVSLVVNVASECGFTDQHYRALQQLQRDLGPHHFNVL 82 + FY+ K N+ G VS+ KY+G V L VNV+S+CG T +Y LQ L VL Sbjct: 626100 KSFYELKDFNMAGNEVSMSKYKGKVVLAVNVSSKCGLTPTNYPELQTLYEKYKDEGLEVL 625921 Query: 83 AFPCNQFGQQEPDSNKEIESFARRTYSVSFPMFSKIAVTGTGAHPAFKYLAQ----TSGK 138 AFPCNQF QEP +++EI F ++ Y+V+FP F K V G A P F YL + G Sbjct: 625920 AFPCNQFAGQEPGTHEEIMEFVKQ-YNVTFPFFEKHYVNGATARPVFTYLKTKLPGSFGD 625744 Query: 139 EPTWNFWKYLV 149 WNF K+LV Sbjct: 625743 FVKWNFTKFLV 625711 >supercont1.36 of Phytophthora infestans Length = 1665391 Score = 56.6 bits (135), Expect(2) = 2e-16, Method: Composition-based stats. Identities = 25/55 (45%), Positives = 34/55 (61%) Frame = +3 Query: 68 QQLQRDLGPHHFNVLAFPCNQFGQQEPDSNKEIESFARRTYSVSFPMFSKIAVTG 122 Q+L F VL FPCNQFG QEP + ++I FA+ Y V+FP+F+K+ G Sbjct: 528990 QELYEKYHDEGFMVLGFPCNQFGGQEPGTAEDILKFAQEKYHVTFPLFNKVGSYG 529154 Score = 48.1 bits (113), Expect(2) = 2e-16, Method: Composition-based stats. Identities = 22/47 (46%), Positives = 33/47 (70%), Gaps = 1/47 (2%) Frame = +1 Query: 23 QDFYDFKAVNIRGKLVSLEKYRG-SVSLVVNVASECGFTDQHYRALQ 68 + F DF +++G VS+ ++ V LVVNVAS+CG+TD++YR LQ Sbjct: 528769 KSFLDFTIPDLKGHQVSMREFNAFPVILVVNVASDCGYTDKNYRELQ 528909 >supercont1.21 of Phytophthora infestans Length = 2319577 Score = 63.2 bits (152), Expect = 7e-10, Method: Composition-based stats. Identities = 47/145 (32%), Positives = 69/145 (47%), Gaps = 6/145 (4%) Frame = -2 Query: 41 EKYRGSVSLVVNVASECGFTDQHYRALQQLQRDLGPHHFNVLAFPCNQFGQQEPDSNKEI 100 + +R +LVVN AS+CG Q + LQ L V+A P N F QEP ++ Sbjct: 225297 QDFRFKAALVVNTASKCGHAGQ-LKQLQALHEKYSEQGLIVVAVPSNDFAGQEPG---KV 225130 Query: 101 ESFARRTYS--VSFPMFSKIAVTGTGAHPAFKYLAQ--TSGKEPTWNFWKYLVAPDGKVV 156 + +R V+F + + V G AHP FK +A ++ PTWNF K+LV G + Sbjct: 225129 DDILKRYADCGVTFAIAERTPVAGDKAHPFFKKIADKYSTSVAPTWNFDKFLVDHRGDMR 224950 Query: 157 GAW--DPTVSVEEVRPQITALVRKL 179 + D V EV +I ++ L Sbjct: 224949 AVFPNDTEPLVTEVIAEIEEVLEDL 224875 >supercont1.3 of Phytophthora infestans Length = 5458067 Score = 60.1 bits (144), Expect = 6e-09, Method: Composition-based stats. Identities = 35/105 (33%), Positives = 50/105 (47%), Gaps = 5/105 (4%) Frame = +3 Query: 36 KLVSLEKYRGSVSLVVNVASECGFTDQHYRALQQLQRDLGPHHFNVLAFPCNQFGQQEPD 95 K + L Y G L+VNVAS C T + Y L +L + ++ PCNQFG QE Sbjct: 810444 KFIRLADYAGKPILIVNVASHCNSTTKAYVQLNELSKRF--PELIIIGCPCNQFGHQENL 810617 Query: 96 SNKEIESFAR-----RTYSVSFPMFSKIAVTGTGAHPAFKYLAQT 135 + +EI R + + +F + K+ V G AH F +L T Sbjct: 810618 NGEEIYQSLRHVRPGKGFETAFQLTEKVEVNGANAHALFNFLRIT 810752 >supercont1.8 of Phytophthora infestans Length = 3946259 Score = 59.7 bits (143), Expect = 7e-09, Method: Composition-based stats. Identities = 47/137 (34%), Positives = 65/137 (47%), Gaps = 7/137 (5%) Frame = +3 Query: 47 VSLVVNVASECGFTDQHYRALQQLQRDLGPHHFNVLAFPCNQFGQQEPDSNKEIESFARR 106 V LVVN+ S+CG T +Y LQQL L FP N+F EP +++EI + Sbjct: 1504167 VVLVVNMTSKCGLTPTNYPELQQLHEKCQREGLVGLGFP*NKFAGPEPGTHEEILELV-K 1504343 Query: 107 TYSVSFPMFSKIAVTGTGAHPAFKYLAQ----TSGKEPTWNFWKYLVAPDGKVVGAWDPT 162 Y+V F M K V G+ A P F +L T G N K+LV +G+ + P Sbjct: 1504344 PYNVMFLMLEKHDVNGSSAPPVFTHLKAKLSCTFGNYIK*NNTKFLVDRNGQPYKRYAPK 1504523 Query: 163 ---VSVEEVRPQITALV 176 +S EE ++ A V Sbjct: 1504524 DLPLSFEEDIKELLAKV 1504574 TBLASTN 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= SPP00000011_1.0 # Prot # Glutathione peroxidase 8 (GPx8) # Hs (209 letters) Database: genome.fa 4921 sequences; 228,543,505 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value supercont1.67 of Phytophthora infestans 112 9e-25 supercont1.56 of Phytophthora infestans 108 1e-23 supercont1.36 of Phytophthora infestans 64 8e-18 supercont1.3 of Phytophthora infestans 59 1e-08 supercont1.8 of Phytophthora infestans 54 6e-07 supercont1.52 of Phytophthora infestans 35 0.25 supercont1.469 of Phytophthora infestans 35 0.32 supercont1.4853 of Phytophthora infestans 30 5.4 >supercont1.67 of Phytophthora infestans Length = 703539 Score = 112 bits (281), Expect = 9e-25, Method: Composition-based stats. Identities = 67/165 (40%), Positives = 89/165 (53%), Gaps = 7/165 (4%) Frame = -1 Query: 43 KINSFYAFEVKDAKGRTVSLEKYKGKVSLVVNVASDCQLTDRNYLGLKELHKEFGPSHFS 102 KI SFY + + G VS+ KYKGKV L VNV+S C LT NY L+ L++++ Sbjct: 179148 KIKSFYELKDFNMAGNEVSMSKYKGKVVLAVNVSSKCGLTPTNYPELQTLYEKYKDEGLE 178969 Query: 103 VLAFPCNQFGESEPRPSKEVESFARKNYGVTFPIFHKIKILGSEGEPAFRFLVDSSKKEP 162 VLAFPCNQF EP +E+ F K Y VTFP F K + G+ P F +L K P Sbjct: 178968 VLAFPCNQFAGQEPGAHEEIMEFV-KQYNVTFPFFEKHDVNGATARPVFTYL---KTKLP 178801 Query: 163 -------RWNFWKYLVNPEGQVVKFWKPEEPIEVIRPDIAALVRQ 200 +WNF K+LV+ GQ K + P++ + DI L+ Q Sbjct: 178800 GSFGDFVKWNFTKFLVDRNGQPYKRFAPKDRPLSLEEDIKTLLAQ 178666 Score = 111 bits (277), Expect = 3e-24, Method: Composition-based stats. Identities = 67/165 (40%), Positives = 88/165 (53%), Gaps = 7/165 (4%) Frame = -1 Query: 43 KINSFYAFEVKDAKGRTVSLEKYKGKVSLVVNVASDCQLTDRNYLGLKELHKEFGPSHFS 102 KI SFY + D G VS+ KYKGKV L VNV+S C LT NY L+ L++++ Sbjct: 230976 KIKSFYELKDFDMAGNEVSMSKYKGKVVLAVNVSSKCGLTPTNYPELQTLYEKYKEEGLE 230797 Query: 103 VLAFPCNQFGESEPRPSKEVESFARKNYGVTFPIFHKIKILGSEGEPAFRFLVDSSKKEP 162 VLAFPCNQF EP +E+ F K Y VTFP F K + G+ P F +L K P Sbjct: 230796 VLAFPCNQFAGQEPGTHEEIMEFV-KQYNVTFPFFEKHDVNGATARPVFTYL---KTKLP 230629 Query: 163 -------RWNFWKYLVNPEGQVVKFWKPEEPIEVIRPDIAALVRQ 200 +WNF K+LV+ GQ K + P++ +I L+ Q Sbjct: 230628 GSFGDFVKWNFTKFLVDRNGQPYKRFAPKDRPLSFEEEIKTLLAQ 230494 Score = 110 bits (276), Expect = 4e-24, Method: Composition-based stats. Identities = 66/160 (41%), Positives = 87/160 (54%), Gaps = 7/160 (4%) Frame = -2 Query: 46 SFYAFEVKDAKGRTVSLEKYKGKVSLVVNVASDCQLTDRNYLGLKELHKEFGPSHFSVLA 105 SFY + D + VS+E YKGKV LVVNV+S C LT NY L++LH+++ VL Sbjct: 225830 SFYELKDFDMDKKEVSMEDYKGKVVLVVNVSSKCGLTPTNYPELQQLHEKYHEEGLVVLG 225651 Query: 106 FPCNQFGESEPRPSKEVESFARKNYGVTFPIFHKIKILGSEGEPAFRFLVDSSKKEP--- 162 FPCNQF EP +E+ F K Y VTFP+F K + GS P F +L K P Sbjct: 225650 FPCNQFAGQEPGTHEEILEFV-KQYNVTFPLFEKHDVNGSNARPVFTYL---KAKLPGTF 225483 Query: 163 ----RWNFWKYLVNPEGQVVKFWKPEEPIEVIRPDIAALV 198 +WNF K+LV+ GQ K + P++ DI L+ Sbjct: 225482 GNYIKWNFTKFLVDRNGQPFKRFAPKDLPPSFEEDIKELL 225363 Score = 59.7 bits (143), Expect = 9e-09, Method: Composition-based stats. Identities = 40/143 (27%), Positives = 68/143 (47%), Gaps = 9/143 (6%) Frame = -2 Query: 46 SFYAFEVKDAKGRTVSLEKYKGKVSLVVNVAS-DCQLTDRNYLGLKELHKEFGPSHFSVL 104 S Y+ DA G T L + +G V+L+ NV+S C + L+EL ++ + +V+ Sbjct: 223721 SLYSLRDTDASGNTFCLSELRGHVALLTNVSSGTCSSNAKQLQQLEELSSKYVDAGLTVV 223542 Query: 105 AFPCNQFGESEPRPSKEVESFARKNYGVTFPIFHKIKILGSEGEPAFRF----LVDSSKK 160 AFP QFG+ E +++ + + +GV FP+ + G A F L ++K Sbjct: 223541 AFPSAQFGDGEFGNDEDLVEYFHELFGVNFPVLATRDVNGPSARDAMLFCKTRLPGAAKS 223362 Query: 161 EPRW----NFWKYLVNPEGQVVK 179 N+ K+LV +G + K Sbjct: 223361 AANAFIENNYVKFLVGRDGHLFK 223293 >supercont1.56 of Phytophthora infestans Length = 775166 Score = 108 bits (271), Expect = 1e-23, Method: Composition-based stats. Identities = 66/165 (40%), Positives = 88/165 (53%), Gaps = 7/165 (4%) Frame = -3 Query: 43 KINSFYAFEVKDAKGRTVSLEKYKGKVSLVVNVASDCQLTDRNYLGLKELHKEFGPSHFS 102 KI SFY + + G VS+ KYKGKV L VNV+S C LT NY L+ L++++ Sbjct: 626106 KIKSFYELKDFNMAGNEVSMSKYKGKVVLAVNVSSKCGLTPTNYPELQTLYEKYKDEGLE 625927 Query: 103 VLAFPCNQFGESEPRPSKEVESFARKNYGVTFPIFHKIKILGSEGEPAFRFLVDSSKKEP 162 VLAFPCNQF EP +E+ F K Y VTFP F K + G+ P F +L K P Sbjct: 625926 VLAFPCNQFAGQEPGTHEEIMEFV-KQYNVTFPFFEKHYVNGATARPVFTYL---KTKLP 625759 Query: 163 -------RWNFWKYLVNPEGQVVKFWKPEEPIEVIRPDIAALVRQ 200 +WNF K+LV+ Q K + P++ + DI L+ Q Sbjct: 625758 GSFGDFVKWNFTKFLVDRNRQPYKRFAPKDRPLSLEEDIKTLLAQ 625624 >supercont1.36 of Phytophthora infestans Length = 1665391 Score = 63.9 bits (154), Expect(2) = 8e-18, Method: Composition-based stats. Identities = 31/75 (41%), Positives = 46/75 (61%) Frame = +3 Query: 90 KELHKEFGPSHFSVLAFPCNQFGESEPRPSKEVESFARKNYGVTFPIFHKIKILGSEGEP 149 +EL++++ F VL FPCNQFG EP ++++ FA++ Y VTFP+F+K+ GS GE Sbjct: 528990 QELYEKYHDEGFMVLGFPCNQFGGQEPGTAEDILKFAQEKYHVTFPLFNKV---GSYGEN 529160 Query: 150 AFRFLVDSSKKEPRW 164 L+DS W Sbjct: 529161 HLNGLLDSDYFAGLW 529205 Score = 46.2 bits (108), Expect(2) = 8e-18, Method: Composition-based stats. Identities = 23/49 (46%), Positives = 31/49 (63%), Gaps = 1/49 (2%) Frame = +1 Query: 43 KINSFYAFEVKDAKGRTVSLEKYKG-KVSLVVNVASDCQLTDRNYLGLK 90 ++ SF F + D KG VS+ ++ V LVVNVASDC TD+NY L+ Sbjct: 528763 EVKSFLDFTIPDLKGHQVSMREFNAFPVILVVNVASDCGYTDKNYRELQ 528909 >supercont1.3 of Phytophthora infestans Length = 5458067 Score = 58.9 bits (141), Expect = 1e-08, Method: Composition-based stats. Identities = 34/102 (33%), Positives = 49/102 (48%), Gaps = 5/102 (4%) Frame = +3 Query: 58 RTVSLEKYKGKVSLVVNVASDCQLTDRNYLGLKELHKEFGPSHFSVLAFPCNQFGESEPR 117 + + L Y GK L+VNVAS C T + Y+ L EL K F ++ PCNQFG E Sbjct: 810444 KFIRLADYAGKPILIVNVASHCNSTTKAYVQLNELSKRF--PELIIIGCPCNQFGHQENL 810617 Query: 118 PSKEVESFAR-----KNYGVTFPIFHKIKILGSEGEPAFRFL 154 +E+ R K + F + K+++ G+ F FL Sbjct: 810618 NGEEIYQSLRHVRPGKGFETAFQLTEKVEVNGANAHALFNFL 810743 >supercont1.8 of Phytophthora infestans Length = 3946259 Score = 53.5 bits (127), Expect = 6e-07, Method: Composition-based stats. Identities = 44/138 (31%), Positives = 64/138 (46%), Gaps = 4/138 (2%) Frame = +3 Query: 68 KVSLVVNVASDCQLTDRNYLGLKELHKEFGPSHFSVLAFPCNQFGESEPRPSKEVESFAR 127 +V LVVN+ S C LT NY L++LH++ L FP N+F EP +E+ Sbjct: 1504164 QVVLVVNMTSKCGLTPTNYPELQQLHEKCQREGLVGLGFP*NKFAGPEPGTHEEILELV- 1504340 Query: 128 KNYGVTFPIFHKIKILGSEGEPAFRFLVD----SSKKEPRWNFWKYLVNPEGQVVKFWKP 183 K Y V F + K + GS P F L + + N K+LV+ GQ K + P Sbjct: 1504341 KPYNVMFLMLEKHDVNGSSAPPVFTHLKAKLSCTFGNYIK*NNTKFLVDRNGQPYKRYAP 1504520 Query: 184 EEPIEVIRPDIAALVRQV 201 ++ DI L+ +V Sbjct: 1504521 KDLPLSFEEDIKELLAKV 1504574 >supercont1.52 of Phytophthora infestans Length = 962280 Score = 35.0 bits (79), Expect = 0.25, Method: Composition-based stats. Identities = 22/64 (34%), Positives = 32/64 (50%) Frame = -1 Query: 131 GVTFPIFHKIKILGSEGEPAFRFLVDSSKKEPRWNFWKYLVNPEGQVVKFWKPEEPIEVI 190 G T+P + + G +RFL S KK R N+W+Y G VV+ P+ +V Sbjct: 406032 GQTWPKVVILAVQGVHFPRKWRFLA-SLKKSLRSNYWRYACKTLGAVVRTHAPKFSAKVC 405856 Query: 191 RPDI 194 RPD+ Sbjct: 405855 RPDL 405844 >supercont1.469 of Phytophthora infestans Length = 70797 Score = 34.7 bits (78), Expect = 0.32, Method: Composition-based stats. Identities = 22/64 (34%), Positives = 32/64 (50%) Frame = +1 Query: 131 GVTFPIFHKIKILGSEGEPAFRFLVDSSKKEPRWNFWKYLVNPEGQVVKFWKPEEPIEVI 190 G T+P + + G +RFL S KK R N+W+Y G VV+ P ++V Sbjct: 68368 GQTWPKVVILAVQGVHFPRKWRFLA-SLKKSLRSNYWRYACKTLGAVVRTHAPGFLLKVC 68544 Query: 191 RPDI 194 RPD+ Sbjct: 68545 RPDL 68556 >supercont1.4853 of Phytophthora infestans Length = 802 Score = 30.4 bits (67), Expect = 5.4, Method: Composition-based stats. Identities = 20/64 (31%), Positives = 30/64 (46%) Frame = -3 Query: 131 GVTFPIFHKIKILGSEGEPAFRFLVDSSKKEPRWNFWKYLVNPEGQVVKFWKPEEPIEVI 190 G T+P + + G +RFL S KK R N+W+Y G VV+ P ++ Sbjct: 215 GQTWPKVVILAVQGVHFPRKWRFLA-SLKKSLRSNYWRYACKTLGAVVRTHAPSFLLKSA 39 Query: 191 RPDI 194 PD+ Sbjct: 38 EPDL 27 Database: genome.fa Posted date: Feb 28, 2008 11:00 AM Number of letters in database: 228,543,505 Number of sequences in database: 4921 Lambda K H 0.322 0.139 0.431 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 4921 Number of Hits to DB: 439,008,522 Number of extensions: 6657384 Number of successful extensions: 24047 Number of sequences better than 10.0: 22 Number of HSP's gapped: 23943 Number of HSP's successfully gapped: 97 Length of database: 76,181,168 Neighboring words threshold: 13 Window for multiple hits: 40 X1: 15 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (21.4 bits) S2: 49 (23.5 bits)