genewise output Score 450.20 bits over entire alignment Scores as bits over a synchronous coding model Warning: The bits scores is not probablistically correct for single seqs See WWW help for more info SPP00000034_1.0 1 MNGPEDLPK--SYDYDLIIIGGGSGGLAAAKEAAQYGKKVMVLDFVTPT N E YDYD ++IGGG GG+A+AKEAA +G KV++ D+V P+ SNNSECKSDHCDYDYDYVVIGGGPGGMASAKEAAAHGAKVLLFDYVKPS subseq(900000,6 1618 aaaagtatgctgtgtgtggagggcggagtgaggggcggagcctgtgaca gaagagacaagaaaaaatttgggcggtcccaacccagcattttaatacg ccccatatccctcccctggcgggccaggcggagggcgggacgctcggac SPP00000034_1.0 48 PLGTRWGLGGTCVNVGCIPKKLMHQAALLGQALQ-DSRNYGWKVEETVK GT+WG+GGTCVNVGC+PKKLMH A +G + DS YGW ++ SKGTKWGIGGTCVNVGCVPKKLMHYAGNMGSLFKLDSTQYGWTCKD-LS subseq(900000,6 1765 aagaatgaggatgaggtgcaacactggaagactatgtactgtatag ta gagcaggtggcgtatggtcaattaacgatggttataccaaggcgaa tg caacggaaaggcgcactgaggggtcaatgcctcaattcactggtat ac SPP00000034_1.0 96 HDWDRMIEAVQNHIGSLNWGYRVALREKKVVYENAYGQFIGPHRIK--A H+W +++ VQ+HI SLN+ Y LR +V Y N + H + HNWGKLVSTVQSHIRSLNFSYLTGLRSSQVKYINGLASLKDEHTVAYYL subseq(900000,6 1909 catgacgtagctcactcatatcagcattcgataagtgtcaggcaggttc aaggattcctacatgctatgatcgtgccataatagtcctaaaactcaat ccgggatcgtgttaccattccgcgtatcggacccgaccggtgcctgcca SPP00000034_1.0 143 TNNKGKEKIYSAERFLIATGERPRYL-GIPGDKEYCISSDDLFSLPYCP + +E+ +A+ +LIATG RP + G +E I+SDD+FS+ P KGDMSQEETITAKYILIATGCRPHIPEDVEGARELSITSDDIFSMKKVP subseq(900000,6 2056 aggatcggaaagatacagagtaccacggggggagcaaatggattaaagc agatcaaactccaatttccgggcatcaatagcgatgtccaattctaatc ggcgtggggcacgctccgtgtacccggtaacagaccaagtctttgggca SPP00000034_1.0 191 GKTLVVGASYVALECAGFLAGIGLDVTVMVRSILLRGFDQDMANKIGEH GKTL+VGASYVALECAGFL +G DVTV VRSI+LRGFD A K+ + GKTLIVGASYVALECAGFLNSLGFDVTVAVRSIVLRGFDSQCALKVKNY subseq(900000,6 2203 gaacagggttggcgtggttatcgtggagggctagtcgtgtctgcagaat gactttgccatctagcgttactgtatctctgctttggtacagctataaa gaccctagtctgtatggtactatccgtagtggtagccctagcgggggtc SPP00000034_1.0 240 MEEHGIKFIRQFVPIKVEQIEAGTPGRLRVVAQSTNSEEIIEGEYNTVM MEE G+ F +P K+ + G ++ V+ +E Y+TV+ MEEQGVLFKEGVLPKKLSK---GEEDKVAVLFTDGTTEL-----YDTVL subseq(900000,6 2350 aggcggctagggccaacta ggggagggctaggaagc tgagt taaagtttaagttcaatca gaaaatctttcagccat aactt ggggacctaaatcgggaca gggcaatgccttccaag tcctg SPP00000034_1.0 289 LAIGRDACTRKIGLETVGVKINEKTGKIPVTDEEQTNVPYIYAIGDILE A GR + LE + + +++ KI + TNVP I+A+GD+ YATGRKGDIAMLHLERLNIHVDKSANKIITNEGSCTNVPNIFAVGDVAV subseq(900000,6 2473 tgagaaggagatctgccaacggaagaaaaaaggataagcaatggggggg accggagatcttatagtatataagcaattcaagggcatcattctgatct tagagaacccggcgagactcttgtatattctgtccctcccctcgacctg SPP00000034_1.0 338 DKVELTPVAIQAGRLLAQRLYAGSTVKCDYENVPTTVFTPLEYGACGLS D EL PVAI+AG +LA+RL+ S DY +PT ++TP+EYGACG S DVPELAPVAIKAGEILARRLFKQSQEIMDYTFIPTAIYTPIEYGACGYS subseq(900000,6 2620 ggcgtgcggaagggacgaactactcgaagtatacagatacagtggtgtt atcatcctctacgattcggttaacaattaacttccctacctaagcggac tgtgattatcgggacgcggacaggaatgtccctcgcttcctgtcctatt SPP00000034_1.0 387 EEKAVEKFGEENIEVYHSYFWPLEWTIPSRD--------------NNKC EEKA E FG N+EV+ F LE + R+ + C EEKAYEAFGTSNVEVFLQEFNNLEISAVHREKHVRAQKDQYDTDVSSTC subseq(900000,6 2767 ggagtggtgatagggtccgtaatgatggcagacgagcagctgaggaaat aaacaactgccatatttaataatatcctagaaatgcaaaaaacatggcg aagatagtcactaggctaatctaatttgtgggtggtggtgctatgtccc SPP00000034_1.0 422 YAKIICNTKDNERVVGFHVLGPNAGEVTQGFAAALKCGLTKKQLDSTIG +K++C ++ RVVGFH +GPNAGEVTQG+A AL+ K DS +G LSKLVCLKSEDNRVVGFHYVGPNAGEVTQGMALALRLKARKSDFDSCVG subseq(900000,6 2914 ttacgttaaggacgggtctggcaggggacgagcgcacagaaagtgatgg tcattgtagaaagttgtaatgcacgatcagtctctgtacgagataggtg gtactcagtactggtctccgtttggattgcgtggggggtggcctcccgc SPP00000034_1.0 471 IHPVCAEVFTTLSVTKRSGASIL-QAGCUGX IHP AE F LSVT+ SG S+ GC G IHPTDAESFMNLSVTRASGLSFAAKGGCGGG subseq(900000,6 3061 accagggttaactgacgtgcttggaggtggg taccacacttatctcgccgtctccagggggg tccgcaggtgccccgcgccgccccgcccccc // Gene 1 Gene 1618 3153 Exon 1618 3153 phase 0 // >subseq(900000,6000).[1618:3153].sp.tr SNNSECKSDHCDYDYDYVVIGGGPGGMASAKEAAAHGAKVLLFDYVKPSSKGTKWGIGGT CVNVGCVPKKLMHYAGNMGSLFKLDSTQYGWTCKDLSHNWGKLVSTVQSHIRSLNFSYLT GLRSSQVKYINGLASLKDEHTVAYYLKGDMSQEETITAKYILIATGCRPHIPEDVEGARE LSITSDDIFSMKKVPGKTLIVGASYVALECAGFLNSLGFDVTVAVRSIVLRGFDSQCALK VKNYMEEQGVLFKEGVLPKKLSKGEEDKVAVLFTDGTTELYDTVLYATGRKGDIAMLHLE RLNIHVDKSANKIITNEGSCTNVPNIFAVGDVAVDVPELAPVAIKAGEILARRLFKQSQE IMDYTFIPTAIYTPIEYGACGYSEEKAYEAFGTSNVEVFLQEFNNLEISAVHREKHVRAQ KDQYDTDVSSTCLSKLVCLKSEDNRVVGFHYVGPNAGEVTQGMALALRLKARKSDFDSCV GIHPTDAESFMNLSVTRASGLSFAAKGGCGGG // >subseq(900000,6000).[1618:3153].sp AGCAACAACAGCGAATGTAAATCTGACCACTGCGATTACGACTACGACTATGTGGTGATC GGGGGGGGGCCCGGCGGAATGGCGTCCGCGAAGGAAGCGGCGGCGCACGGGGCGAAGGTA CTCCTGTTCGATTACGTGAAGCCAAGCAGCAAAGGAACCAAGTGGGGAATAGGAGGGACG TGCGTGAACGTAGGCTGTGTGCCAAAGAAGCTGATGCATTACGCAGGAAATATGGGCAGC CTTTTCAAATTAGATTCTACCCAATACGGTTGGACGTGTAAAGATTTAAGCCACAACTGG GGGAAGCTAGTTTCCACGGTTCAGTCTCATATACGCTCCCTAAATTTTAGCTACCTGACC GGGCTTAGATCTTCCCAGGTGAAATACATCAACGGGTTAGCCTCCCTGAAGGATGAGCAC ACCGTTGCGTACTACCTAAAGGGGGACATGTCTCAGGAGGAGACGATCACAGCCAAGTAC ATTCTCATCGCGACTGGGTGTAGACCCCACATCCCGGAGGATGTAGAAGGCGCAAGGGAA CTCAGCATAACATCGGATGACATTTTTTCTATGAAGAAGGTCCCAGGGAAAACCCTCATC GTTGGAGCGTCTTACGTTGCGCTTGAATGTGCGGGGTTTTTAAACTCTCTAGGTTTCGAC GTGACTGTAGCGGTTCGGTCGATTGTATTGCGCGGCTTCGATTCACAGTGCGCGCTGAAG GTGAAGAATTACATGGAGGAGCAGGGAGTCCTCTTTAAAGAAGGAGTTCTCCCGAAGAAG CTATCCAAAGGGGAGGAGGACAAAGTAGCTGTGCTCTTCACTGATGGCACCACAGAACTG TATGACACCGTTTTGTATGCAACGGGAAGGAAAGGAGACATCGCCATGTTGCACTTGGAA CGGCTAAACATTCACGTTGATAAGAGTGCAAATAAAATTATTACCAATGAGGGTAGCTGC ACCAATGTCCCCAACATCTTTGCCGTGGGAGACGTCGCTGTGGATGTGCCTGAGTTAGCT CCTGTAGCTATCAAGGCGGGGGAAATCCTGGCCAGGAGGCTATTCAAACAGTCGCAAGAA ATTATGGATTACACCTTCATTCCCACGGCCATTTATACCCCCATTGAGTATGGCGCCTGT GGATATTCTGAAGAAAAGGCATATGAAGCGTTTGGCACATCCAATGTAGAGGTGTTCCTT CAAGAATTTAACAATTTAGAAATTTCTGCTGTGCATAGGGAGAAGCATGTGAGGGCTCAG AAGGATCAGTACGATACAGATGTGAGTAGCACCTGCTTGTCTAAACTCGTTTGCTTAAAG AGTGAAGACAATCGGGTGGTTGGCTTTCACTACGTGGGTCCTAATGCGGGGGAAGTTACT CAGGGCATGGCTCTGGCGCTGAGGCTGAAGGCTAGGAAGAGCGACTTTGACAGCTGCGTG GGCATTCACCCCACGGACGCAGAGTCGTTTATGAACCTCTCCGTCACGCGCGCGTCCGGC CTGTCCTTCGCCGCCAAGGGCGGCTGCGGCGGCGGC //