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|sgp2| predictions on sequence submitted from /paris.upf.edu/ are:


## date Thu Mar 16 11:38:37 2006
## source-version: geneid v 1.1 -- geneid@imim.es
# Sequence seq1 - Length = 95000 bps
# Optimal Gene Structure. 2 genes. Score = 76.968561 
# Gene 1 (Forward). 1 exons. 52 aa. Score = 5.925078 
  Single    30351    30506	 5.93	+ 0 0	-0.84	 0.00	 8.30	 8.32	AA   1: 52 gene_1

>seq1|sgp2_v1.0_predicted_cDNA_1|156_NN
ATGGCTGGCTTGGTGGCTGGCGATGAGCCTGCAGCATGGGACTGGGTGTTCCACCACGGC
TTGGCTGTTGTCCAGGGAGCTTTCAGTCGCTGGGGTTCCCACAGTGCCAAGCACGAGGCA
GGTGCAGAAAGGATAAAGGTTTCTGTTCCCCATTAG

>seq1|sgp2_v1.0_predicted_protein_1|52_AA
MAGLVAGDEPAAWDWVFHHGLAVVQGAFSRWGSHSAKHEAGAERIKVSVPH*

# Gene 2 (Forward). 4 exons. 163 aa. Score = 71.043483 
   First    39629    39681	-0.10	+ 0 2	 7.03	 4.44	 0.61	-5.30	AA   1: 18 gene_2
Internal    63787    63897	17.90	+ 1 2	 5.92	 3.96	 4.59	 9.14	AA  18: 55 gene_2
Internal    68568    68676	17.14	+ 1 0	 4.77	 3.31	 5.16	10.32	AA  55: 91 gene_2
Internal    90433    90648	36.10	+ 0 0	 6.29	 2.41	 7.68	24.88	AA  92:163 gene_2

>seq1|sgp2_v1.0_predicted_cDNA_2|489_NN
ATGCAGAGGTCGCCTCTGGAAAAGGCCAGCGTTGTCTCCAAACTTTTTTTCAGCTGGACC
AGACCAATTTTGAGGAAAGGATACAGACAGCGCCTGGAATTGTCAGACATATACCAAATC
CCTTCTGTTGATTCTGCTGACAATCTATCTGAAAAATTGGAAAGAGAATGGGATAGAGAG
CTGGCTTCAAAGAAAAATCCTAAACTCATTAATGCCCTTCGGCGATGTTTTTTCTGGAGA
TTTATGTTCTATGGAATCTTTTTATATTTAGGGGAAGTCACCAAAGCAGTACAGCCTCTC
TTACTGGGAAGAATCATAGCTTCCTATGACCCGGATAACAAGGAGGAACGCTCTATCGCG
ATTTATCTAGGCATAGGCTTATGCCTTCTCTTTATTGTGAGGACACTGCTCCTACACCCA
GCCATTTTTGGCCTTCATCACATTGGAATGCAGATGAGAATAGCTATGTTTAGTTTGATT
TATAAGAAG

>seq1|sgp2_v1.0_predicted_protein_2|163_AA
MQRSPLEKASVVSKLFFSWTRPILRKGYRQRLELSDIYQIPSVDSADNLSEKLEREWDRE
LASKKNPKLINALRRCFFWRFMFYGIFLYLGEVTKAVQPLLLGRIIASYDPDNKEERSIA
IYLGIGLCLLFIVRTLLLHPAIFGLHHIGMQMRIAMFSLIYKK

    ------------------------------------------------------------------------
    Species:
    //

    Command:
    |sgp2 -g D --query 31210paris.upf.edu.seq1.fasta --tblastx
    blast31210paris.upf.edu.blast |

    Running time:
    0.66 secs

	 

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