Note Best alignment is between forward est and forward genome, and splice  sites imply forward gene
Exon       265  41.5  2233  2880 chr7_1204.1      8   654 gi_27841033_gb_BX118212.1_BX1  

Span       265  41.5  2233  2880 chr7_1204.1      8   654 gi_27841033_gb_BX118212.1_BX1  

Segment     11 100.0  2233  2243 chr7_1204.1      8    18 gi_27841033_gb_BX118212.1_BX1  
Segment    256  40.6  2245  2880 chr7_1204.1     19   654 gi_27841033_gb_BX118212.1_BX1