BG927804 Note Best alignment is between forward est and forward genome, and splice sites imply forward gene Exon 116 100.0 88681 88796 AC090953 86 201 gi +Intron -20 0.0 88797 95435 AC090953 Exon 130 100.0 95436 95565 AC090953 202 331 gi ?Intron -40 0.0 95566 95940 AC090953 Exon 107 100.0 95941 96047 AC090953 332 438 gi +Intron -20 0.0 96048 98647 AC090953 Exon 144 100.0 98648 98791 AC090953 439 582 gi +Intron -20 0.0 98792 104906 AC090953 Exon 61 100.0 104907 104967 AC090953 583 643 gi Span 459 100.0 88681 104968 AC090953 86 644 gi Segment 116 100.0 88681 88796 AC090953 86 201 gi Segment 130 100.0 95436 95565 AC090953 202 331 gi Segment 107 100.0 95941 96047 AC090953 332 438 gi Segment 144 100.0 98648 98791 AC090953 439 582 gi Segment 61 100.0 104907 104967 AC090953 583 643 gi AC090953 vs gi: AC090953 88681 CCCCCCTCGACCAGGAGGCCACCCTGAGGAACAGGGTTCGCATTGCTGAG 88730 |||||||||||||||||||||||||||||||||||||||||||||||||| gi 86 CCCCCCTCGACCAGGAGGCCACCCTGAGGAACAGGGTTCGCATTGCTGAG 135 AC090953 88731 ACCTGGCTGGGGTCATTCAAAGAAACCTTCTACAAGCATAGCCCAGAGGC 88780 |||||||||||||||||||||||||||||||||||||||||||||||||| gi 136 ACCTGGCTGGGGTCATTCAAAGAAACCTTCTACAAGCATAGCCCAGAGGC 185 AC090953 88781 CTTCTCCTTGAGCAAGgtaag......cccagGCTGAGAAGCCAGACTGC 95453 ||||||||||||||||>>>>> 6639 >>>>>|||||||||||||||||| gi 186 CTTCTCCTTGAGCAAG................GCTGAGAAGCCAGACTGC 219 AC090953 95454 ATGGAACGCTTGCAGCTGCAAAGGAGACTGGGTTGTCGGACATTCCACTG 95503 |||||||||||||||||||||||||||||||||||||||||||||||||| gi 220 ATGGAACGCTTGCAGCTGCAAAGGAGACTGGGTTGTCGGACATTCCACTG 269 AC090953 95504 GTTTCTGGCTAATGTCTACCCTGAGCTGTACCCATCTGAACCCAGGCCCA 95553 |||||||||||||||||||||||||||||||||||||||||||||||||| gi 270 GTTTCTGGCTAATGTCTACCCTGAGCTGTACCCATCTGAACCCAGGCCCA 319 AC090953 95554 GTTTCTCTGGAAaggca.....ctttcAGCTCCACAACACTGGACTTGGG 95963 ||||||||||||????? 375 ?????||||||||||||||||||||||| gi 320 GTTTCTCTGGAA...............AGCTCCACAACACTGGACTTGGG 354 AC090953 95964 CTCTGTGCAGACTGCCAGGCAGAAGGGGACATCCTGGGCTGTCCCATGGT 96013 |||||||||||||||||||||||||||||||||||||||||||||||||| gi 355 CTCTGTGCAGACTGCCAGGCAGAAGGGGACATCCTGGGCTGTCCCATGGT 404 AC090953 96014 GTTGGCTCCTTGCAGTGACAGCCGGCAGCAACAGgtggg......cacag 96047 ||||||||||||||||||||||||||||||||||>>>>> 2600 >>>>> gi 405 GTTGGCTCCTTGCAGTGACAGCCGGCAGCAACAG................ 438 AC090953 98648 TACCTGCAGCACACCAGCAGGAAGGAGATTCACTTTGGCAGCCCACAGCA 98697 |||||||||||||||||||||||||||||||||||||||||||||||||| gi 439 TACCTGCAGCACACCAGCAGGAAGGAGATTCACTTTGGCAGCCCACAGCA 488 AC090953 98698 CCTGTGCTTTGCTGTCAGGCAGGAGCAGGTGATTCTTCAGAACTGCACGG 98747 |||||||||||||||||||||||||||||||||||||||||||||||||| gi 489 CCTGTGCTTTGCTGTCAGGCAGGAGCAGGTGATTCTTCAGAACTGCACGG 538 AC090953 98748 AGGAAGGCCTGGCCATCCACCAGCAGCACTGGGACTTCCAGGAGgtgag. 98791 ||||||||||||||||||||||||||||||||||||||||||||>>>>> gi 539 AGGAAGGCCTGGCCATCCACCAGCAGCACTGGGACTTCCAGGAG...... 582 AC090953 98791 .....cacagGTTGAATGTCCATGAGTGTGGGAAGAACACGGCTCATCTG 104946 6115 >>>>>|||||||||||||||||||||||||||||||||||||||| gi 582 ..........GTTGAATGTCCATGAGTGTGGGAAGAACACGGCTCATCTG 622 AC090953 104947 GAGCACAGCTGAGGCTAGTAA 104967 ||||||||||||||||||||| gi 623 GAGCACAGCTGAGGCTAGTAA 643 Alignment Score: 459