BG897582 Note Best alignment is between forward est and forward genome, and splice sites imply forward gene Exon 60 94.1 50953 51020 AC090953 89 156 gi +Intron -20 0.0 51021 98725 AC090953 Exon 66 100.0 98726 98791 AC090953 157 222 gi +Intron -20 0.0 98792 103386 AC090953 Exon 341 97.5 103387 103748 AC090953 223 581 gi Span 428 97.4 50953 103749 AC090953 89 582 gi Segment 60 94.1 50953 51020 AC090953 89 156 gi Segment 66 100.0 98726 98791 AC090953 157 222 gi Segment 257 99.6 103387 103644 AC090953 223 480 gi Segment 2 100.0 103646 103647 AC090953 481 482 gi Segment 73 98.6 103648 103721 AC090953 484 557 gi Segment 3 100.0 103722 103724 AC090953 559 561 gi Segment 2 100.0 103726 103727 AC090953 562 563 gi Segment 18 100.0 103731 103748 AC090953 564 581 gi AC090953 vs gi: AC090953 50953 AAATCCACTCAGAGAGGACTTGGGGTGAAACTTGGGTCCTGTGGTTTTCT 51002 || ||| ||| ||| ||||||||||||||||||||||||||||||||||| gi 89 AAGTCCTCTCTGAGTGGACTTGGGGTGAAACTTGGGTCCTGTGGTTTTCT 138 AC090953 51003 GATTGTAAGTGGAAGCAGgtctt.......agcagGTGATTCTTCAGAAC 98740 ||||||||||||||||||>>>>> 47705 >>>>>||||||||||||||| gi 139 GATTGTAAGTGGAAGCAG.................GTGATTCTTCAGAAC 171 AC090953 98741 TGCACGGAGGAAGGCCTGGCCATCCACCAGCAGCACTGGGACTTCCAGGA 98790 |||||||||||||||||||||||||||||||||||||||||||||||||| gi 172 TGCACGGAGGAAGGCCTGGCCATCCACCAGCAGCACTGGGACTTCCAGGA 221 AC090953 98791 Ggtgag......tttagAATGGGATGATTGTCCACATTCTTTCTGGGAAA 103419 |>>>>> 4595 >>>>>||||||||||||||||||||||||||||||||| gi 222 G................AATGGGATGATTGTCCACATTCTTTCTGGGAAA 255 AC090953 103420 TGCATGGAAGCTGTGGTGCAAGAAAACAATAAAGATTTGTACCTGCGTCC 103469 |||||||||||||||||||||||||||||||||||||||||||||||||| gi 256 TGCATGGAAGCTGTGGTGCAAGAAAACAATAAAGATTTGTACCTGCGTCC 305 AC090953 103470 GTGTGATGGAAAAGCCCGCCAGCAGTGGCGTTTTGACCAGATCAATGCTG 103519 |||||||||||||||||||||||||||||||||||||||||||||||||| gi 306 GTGTGATGGAAAAGCCCGCCAGCAGTGGCGTTTTGACCAGATCAATGCTG 355 AC090953 103520 TGGATGAACGATGAATGTCAATGTCAGAAGGAAAAGAGAATTTTGGCCAT 103569 |||||||||||||||||||||||||||||||||||||||||||||||||| gi 356 TGGATGAACGATGAATGTCAATGTCAGAAGGAAAAGAGAATTTTGGCCAT 405 AC090953 103570 CAAAATCCAGCTCCAAGTGAACTTAAAGAGCTTATATATTTCATGAAGCT 103619 ||||||||||||||||||||||||| |||||||||||||||||||||||| gi 406 CAAAATCCAGCTCCAAGTGAACTTANAGAGCTTATATATTTCATGAAGCT 455 AC090953 103620 GATCCTTTTGTGTGTGTGCTCCTGGTGT-TAGGAGAGAAAAAAGCTCTAT 103668 ||||||||||||||||||||||||| || ||||||||||||||||||||| gi 456 GATCCTTTTGTGTGTGTGCTCCTGG-GTGTAGGAGAGAAAAAAGCTCTAT 504 AC090953 103669 GAAAGAATATAGGAAGTTTCTCCTTTTCACACCTTATTTCATTGACTGCT 103718 |||||||||| ||||||||||||||||||||||||||||||||||||||| gi 505 GAAAGAATATNGGAAGTTTCTCCTTTTCACACCTTATTTCATTGACTGCT 554 AC090953 103719 GGC-TGCTTTAAAAAAAAAAAAAAAGGATCC 103748 ||| ||| || |||||||||||||||||| gi 555 GGCTTGC-TT---AAAAAAAAAAAAGGATCC 581 Alignment Score: 428