BG722206 Note Best alignment is between forward est and forward genome, and splice sites imply forward gene Exon 131 99.2 95433 95565 AC090953 115 247 gi ?Intron -40 0.0 95566 95940 AC090953 Exon 107 100.0 95941 96047 AC090953 248 354 gi +Intron -20 0.0 96048 98647 AC090953 Exon 144 100.0 98648 98791 AC090953 355 498 gi +Intron -20 0.0 98792 103386 AC090953 Exon 192 100.0 103387 103578 AC090953 499 690 gi Span 495 99.8 95433 103579 AC090953 115 691 gi Segment 131 99.2 95433 95565 AC090953 115 247 gi Segment 107 100.0 95941 96047 AC090953 248 354 gi Segment 144 100.0 98648 98791 AC090953 355 498 gi Segment 192 100.0 103387 103578 AC090953 499 690 gi AC090953 vs gi: AC090953 95433 CAGGCTGAGAAGCCAGACTGCATGGAACGCTTGCAGCTGCAAAGGAGACT 95482 |||||||||||||||||||||||||||||||||||||||||||||||||| gi 115 CAGGCTGAGAAGCCAGACTGCATGGAACGCTTGCAGCTGCAAAGGAGACT 164 AC090953 95483 GGGTTGTCGGACATTCCACTGGTTTCTGGCTAATGTCTACCCTGAGCTGT 95532 |||||||||||||||||||||||||||||||||||||||||||||||||| gi 165 GGGTTGTCGGACATTCCACTGGTTTCTGGCTAATGTCTACCCTGAGCTGT 214 AC090953 95533 ACCCATCTGAACCCAGGCCCAGTTTCTCTGGAAaggca.....ctttcAG 95942 ||| |||||||||||||||||||||||||||||????? 375 ?????|| gi 215 ACCTATCTGAACCCAGGCCCAGTTTCTCTGGAA...............AG 249 AC090953 95943 CTCCACAACACTGGACTTGGGCTCTGTGCAGACTGCCAGGCAGAAGGGGA 95992 |||||||||||||||||||||||||||||||||||||||||||||||||| gi 250 CTCCACAACACTGGACTTGGGCTCTGTGCAGACTGCCAGGCAGAAGGGGA 299 AC090953 95993 CATCCTGGGCTGTCCCATGGTGTTGGCTCCTTGCAGTGACAGCCGGCAGC 96042 |||||||||||||||||||||||||||||||||||||||||||||||||| gi 300 CATCCTGGGCTGTCCCATGGTGTTGGCTCCTTGCAGTGACAGCCGGCAGC 349 AC090953 96043 AACAGgtggg......cacagTACCTGCAGCACACCAGCAGGAAGGAGAT 98676 |||||>>>>> 2600 >>>>>||||||||||||||||||||||||||||| gi 350 AACAG................TACCTGCAGCACACCAGCAGGAAGGAGAT 383 AC090953 98677 TCACTTTGGCAGCCCACAGCACCTGTGCTTTGCTGTCAGGCAGGAGCAGG 98726 |||||||||||||||||||||||||||||||||||||||||||||||||| gi 384 TCACTTTGGCAGCCCACAGCACCTGTGCTTTGCTGTCAGGCAGGAGCAGG 433 AC090953 98727 TGATTCTTCAGAACTGCACGGAGGAAGGCCTGGCCATCCACCAGCAGCAC 98776 |||||||||||||||||||||||||||||||||||||||||||||||||| gi 434 TGATTCTTCAGAACTGCACGGAGGAAGGCCTGGCCATCCACCAGCAGCAC 483 AC090953 98777 TGGGACTTCCAGGAGgtgag......tttagAATGGGATGATTGTCCACA 103405 |||||||||||||||>>>>> 4595 >>>>>||||||||||||||||||| gi 484 TGGGACTTCCAGGAG................AATGGGATGATTGTCCACA 517 AC090953 103406 TTCTTTCTGGGAAATGCATGGAAGCTGTGGTGCAAGAAAACAATAAAGAT 103455 |||||||||||||||||||||||||||||||||||||||||||||||||| gi 518 TTCTTTCTGGGAAATGCATGGAAGCTGTGGTGCAAGAAAACAATAAAGAT 567 AC090953 103456 TTGTACCTGCGTCCGTGTGATGGAAAAGCCCGCCAGCAGTGGCGTTTTGA 103505 |||||||||||||||||||||||||||||||||||||||||||||||||| gi 568 TTGTACCTGCGTCCGTGTGATGGAAAAGCCCGCCAGCAGTGGCGTTTTGA 617 AC090953 103506 CCAGATCAATGCTGTGGATGAACGATGAATGTCAATGTCAGAAGGAAAAG 103555 |||||||||||||||||||||||||||||||||||||||||||||||||| gi 618 CCAGATCAATGCTGTGGATGAACGATGAATGTCAATGTCAGAAGGAAAAG 667 AC090953 103556 AGAATTTTGGCCATCAAAATCCA 103578 ||||||||||||||||||||||| gi 668 AGAATTTTGGCCATCAAAATCCA 690 Alignment Score: 495